lineage | Count |
---|---|
lineage2.2.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.3.3 | 1 |
lineage4.5 | 1 |
lineage3 | 6 |
lineage4.3.4.2.1 | 2 |
lineage1.2.2.2 | 1 |
lineage4.6.4 | 1 |
lineage3.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4 | 2 |
lineage4.3.2.1 | 1 |
1 | |
lineage1.1.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage1.1.3 | 1 |
lineage4.7 | 2 |
lineage4.3.2 | 1 |
lineage4.8 | 1 |
lineage2.2.1 | 2 |
lineage5.1.2 | 1 |
lineage4.6.2 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 33 |
ID | Drug resistance | Lineage | Country iso2 | SRR067487 | Sensitive | lineage2.2.1.2 | None | SRR6650206 | HR-TB | lineage1.1.3.1 | None | SRR1174833 | MDR-TB | lineage4.3.3 | None | SRR18213860 | Sensitive | lineage4.5 | None | SRR2100129 | Sensitive | lineage3 | None | SRR18213842 | Sensitive | lineage3 | None | ERR176534 | Sensitive | lineage4.3.4.2.1 | mw | SRR6650423 | HR-TB | lineage3 | None | SRR6650371 | Sensitive | lineage3 | None | SRR6650372 | Sensitive | lineage1.2.2.2 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR176731 | Sensitive | lineage3.1.1 | mw | ERR176752 | HR-TB | lineage4.3.4.2.1 | mw | ERR4818373 | Sensitive | lineage4.1.2.1 | None | SRR833022 | HR-TB | lineage4 | None | SRR4037872 | Sensitive | lineage4.3.2.1 | za | ERR266607 | Sensitive | None | SRR998722 | Sensitive | lineage1.1.1 | None | ERR017793 | Sensitive | lineage4.6.2.2 | None | ERR025897 | Sensitive | lineage4.3.4.2 | None | ERR017802 | Sensitive | lineage3 | None | ERR025883 | Sensitive | lineage1.1.3 | None | ERR023733 | Other | lineage4.7 | None | ERR023737 | Sensitive | lineage4.7 | nl | ERR024341 | Sensitive | lineage4.3.2 | None | ERR024355 | Sensitive | lineage4.8 | None | ERR025888 | Sensitive | lineage4 | None | ERR027446 | MDR-TB | lineage2.2.1 | ru | ERR026642 | Sensitive | lineage5.1.2 | None | ERR072079 | Sensitive | lineage3 | None | ERR027452 | MDR-TB | lineage2.2.1 | ru | ERR1213916 | MDR-TB | lineage4.6.2 | gq | ERR403413 | Sensitive | lineage4.1.2 | None |
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