lineage | Count |
---|---|
lineage2.2.1 | 6 |
lineage4.3.3 | 3 |
lineage1.1.1.1 | 8 |
lineage4.8 | 27 |
lineage4.7 | 5 |
lineage4.1.2 | 4 |
lineage4 | 1 |
lineage4.1.2.1 | 27 |
lineage4.3.4.2.1 | 5 |
lineage3 | 3 |
lineage4.4.1.1 | 9 |
lineage1.1.2 | 2 |
lineage4.5 | 4 |
La1.7.X-unk4 | 1 |
lineage1.2.2.1 | 1 |
lineage4.3.2 | 2 |
lineage4.1.4 | 1 |
lineage6 | 2 |
lineage2.2.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage1.2.1.2.1 | 3 |
lineage1.1.3 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 118 |
ID | Drug resistance | Lineage | Country iso2 | SRR18495626 | Sensitive | lineage2.2.1 | None | SRR18549003 | HR-TB | lineage2.2.1 | None | SRR2101296 | Sensitive | lineage4.3.3 | None | SRR2099940 | Sensitive | lineage1.1.1.1 | None | SRR2100835 | Sensitive | lineage1.1.1.1 | None | SRR20970017 | HR-TB | lineage2.2.1 | None | ERR11068443 | Sensitive | lineage4.3.3 | None | SRR6063488 | Sensitive | lineage4.8 | ca | ERR11049647 | Sensitive | lineage4.7 | None | ERR11081407 | Other | lineage4.1.2 | None | ERR11081471 | Sensitive | lineage4 | None | ERR2184277 | Sensitive | lineage4.1.2.1 | pe | SRR6064826 | Sensitive | lineage4.8 | ca | SRR6061427 | Sensitive | lineage4.8 | ca | ERR2516725 | MDR-TB | lineage4.1.2.1 | nl | ERR551742 | Sensitive | lineage4.3.4.2.1 | de | ERR2433001 | MDR-TB | lineage4.3.4.2.1 | br | ERR4819050 | Sensitive | lineage3 | None | SRR6061388 | Sensitive | lineage4.8 | ca | ERR2514586 | Sensitive | lineage4.4.1.1 | gb | ERR4817425 | Sensitive | lineage1.1.1.1 | gb | SRR5073861 | HR-TB | lineage1.1.1.1 | vn | ERR2516607 | MDR-TB | lineage4.1.2.1 | nl | SRR6063501 | Sensitive | lineage4.8 | ca | ERR2514810 | Sensitive | lineage4.7 | gb | ERR4822056 | Sensitive | lineage1.1.1.1 | gb | ERR2514916 | Sensitive | lineage1.1.2 | gb | ERR270725 | Sensitive | lineage1.1.1.1 | None | ERR270634 | Sensitive | lineage1.1.1.1 | None | ERR2516165 | Sensitive | lineage4.8 | es | ERR4822004 | Other | lineage1.1.1.1 | gb | SRR833218 | Sensitive | lineage4.5 | None | ERR2815532 | Other | La1.7.X-unk4 | None | SAMN02414864 | MDR-TB | lineage4.1.2.1 | se | SRR7131206 | Sensitive | lineage4.7 | None | ERR4827580 | HR-TB | lineage4.1.2 | None | ERR4829217 | Sensitive | lineage4.7 | None | ERR4829515 | Sensitive | lineage4.7 | it | ERR3077990 | MDR-TB | lineage1.2.2.1 | None | ERR4831347 | Sensitive | lineage3 | de | SRR6797816 | HR-TB | lineage4.1.2.1 | None | ERR11044227 | Sensitive | lineage4.1.2.1 | None | ERR10465863 | Sensitive | lineage4.1.2.1 | None | ERR11043133 | MDR-TB | lineage4.1.2.1 | None | ERR11044219 | Sensitive | lineage4.1.2.1 | None | ERR3258007 | Sensitive | lineage4.4.1.1 | fr | ERR11044233 | Sensitive | lineage4.1.2.1 | None | ERR11044402 | Sensitive | lineage4.1.2.1 | None | ERR11044515 | Sensitive | lineage4.1.2.1 | None | ERR3257974 | Sensitive | lineage4.4.1.1 | fr | ERR3257977 | Sensitive | lineage4.4.1.1 | fr | ERR3258009 | Sensitive | lineage4.4.1.1 | fr | ERR3257978 | Sensitive | lineage4.4.1.1 | fr | ERR3257979 | Sensitive | lineage4.4.1.1 | fr | ERR3258004 | Sensitive | lineage4.4.1.1 | fr | ERR4024627 | Sensitive | lineage4.3.2 | None | ERR11049399 | Sensitive | lineage4.3.3 | None | ERR3287593 | HR-TB | lineage4.1.4 | None | ERR3509868 | MDR-TB | lineage4.3.4.2.1 | None | ERR3800998 | Sensitive | lineage6 | None | ERR3994109 | HR-TB | lineage4.8 | None | ERR4024608 | Sensitive | lineage4.1.2.1 | None | ERR4195792 | Sensitive | lineage4.8 | None | ERR4024661 | Sensitive | lineage4.1.2.1 | None | ERR4195245 | Sensitive | lineage4.8 | None | ERR4800421 | Sensitive | lineage1.1.2 | in | ERR4596927 | Sensitive | lineage3 | None | ERR4810635 | Sensitive | lineage2.2.1.1 | cn | ERR4810474 | MDR-TB | lineage2.2.1 | cn | ERR4812164 | Sensitive | lineage4.1.2.1 | pe | ERR4811729 | Other | lineage4.3.4.2 | pe | ERR6336758 | RR-TB | lineage1.2.1.2.1 | None | ERR4812614 | Sensitive | lineage4.1.2.1 | pe | ERR894414 | Sensitive | lineage4.8 | None | ERR6865699 | Sensitive | lineage4.1.2.1 | None | ERR6865950 | Sensitive | lineage4.3.2 | None | ERR894413 | Sensitive | lineage4.8 | None | ERR6865725 | Sensitive | lineage4.1.2.1 | None | ERR6866582 | Sensitive | lineage4.4.1.1 | None | ERR6866918 | Other | lineage4.1.2 | None | ERR894412 | Sensitive | lineage4.8 | None | ERR894417 | Sensitive | lineage4.8 | None | ERR894411 | Sensitive | lineage4.8 | None | ERR894416 | Sensitive | lineage4.8 | None | ERR11050061 | Sensitive | lineage4.1.2.1 | None | ERR8975024 | MDR-TB | lineage4.1.2 | None | ERR9121390 | Sensitive | lineage4.8 | None | ERR9125355 | Sensitive | lineage4.8 | None | ERR9121677 | Sensitive | lineage4.8 | None | ERR9125018 | Sensitive | lineage4.8 | None | ERR9125121 | Sensitive | lineage4.8 | None | ERR9125299 | Sensitive | lineage4.8 | None | SRR1144782 | MDR-TB | lineage4.1.2.1 | None | ERR9285835 | Sensitive | lineage4.3.4.2.1 | None | ERR9787122 | Sensitive | lineage6 | None | ERR9125474 | Sensitive | lineage4.8 | None | ERR9286065 | Sensitive | lineage4.3.4.2.1 | None | SRR1011520 | Sensitive | lineage4.5 | None | SRR10808364 | Sensitive | lineage4.1.2.1 | None | SRR1146324 | MDR-TB | lineage4.1.2.1 | None | SRR1163075 | MDR-TB | lineage4.1.2.1 | None | SRR11972258 | HR-TB | lineage1.1.3 | None | SRR1163355 | MDR-TB | lineage4.1.2.1 | None | SRR12006607 | Sensitive | lineage1.2.1.2.1 | None | SRR12142423 | Sensitive | lineage2.2.1 | None | ERR11050483 | Sensitive | lineage4.1.2.1 | None | ERR11050530 | Sensitive | lineage4.1.2.1 | None | SRR13583299 | HR-TB | lineage4.1.2.1 | None | SRR16058031 | Sensitive | lineage4.8 | None | SRR15316343 | HR-TB | lineage2.2.1 | None | SRR15316378 | Sensitive | lineage4.5 | None | SRR15723125 | Pre-XDR-TB | lineage2.2.2 | None | SRR14519850 | Sensitive | lineage1.2.1.2.1 | None | SRR15316282 | Sensitive | lineage4.5 | None | SRR16058294 | Sensitive | lineage4.8 | None | SRR16058675 | Sensitive | lineage4.8 | None | SRR16058396 | Sensitive | lineage4.8 | None | ERR11050721 | Sensitive | lineage4.8 | None |
---|