lineage | Count |
---|---|
lineage2.2.1 | 13 |
La1.7.X-unk5 | 1 |
lineage4.9 | 1 |
lineage4.1.2.1 | 8 |
lineage6.1.1 | 1 |
lineage4.3 | 1 |
lineage1.1.1.1 | 1 |
lineage2.2.1.1 | 3 |
lineage4.3.3 | 1 |
lineage4.4.1.1 | 3 |
lineage4.8 | 44 |
lineage1.1.3.1 | 2 |
lineage1.1.2 | 3 |
lineage4.5 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.2.2.1 | 1 |
lineage4.3.4.2 | 2 |
La1.2 | 1 |
lineage4.8.2 | 2 |
lineage2.2 | 1 |
lineage3 | 12 |
lineage4.3.4.2.1 | 1 |
lineage4.3.2 | 1 |
lineage3.1.3 | 2 |
lineage4.1.1 | 4 |
lineage4 | 5 |
lineage3.1.2 | 2 |
lineage3.1.1 | 2 |
La1.2.BCG | 1 |
lineage4.1.1.3 | 2 |
lineage4.2.1.1 | 3 |
lineage4.3.1.1 | 1 |
1 | |
lineage4.1.1.3.1 | 1 |
lineage4.2.1 | 1 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 131 |
ID | Drug resistance | Lineage | Country iso2 | ERR3803978 | Sensitive | lineage2.2.1 | None | SRR8064853 | Other | La1.7.X-unk5 | None | ERR4028196 | Sensitive | lineage4.9 | None | ERR9892286 | Sensitive | lineage4.1.2.1 | None | ERR4192401 | Sensitive | lineage6.1.1 | None | ERR4812625 | Sensitive | lineage4.3 | pe | ERR7339146 | Sensitive | lineage1.1.1.1 | None | ERR9891976 | Sensitive | lineage4.1.2.1 | None | ERR5863892 | MDR-TB | lineage2.2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR10272567 | Sensitive | lineage4.3.3 | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | SRR11972217 | HR-TB | lineage4.8 | None | SRR11972213 | Sensitive | lineage1.1.3.1 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972238 | Other | lineage1.1.2 | None | SRR11972260 | HR-TB | lineage2.2.1 | None | SRR11972320 | Sensitive | lineage4.5 | None | SRR11972312 | MDR-TB | lineage2.2.1 | None | SRR11972384 | Sensitive | lineage2.2.1 | None | SRR11972431 | Sensitive | lineage1.1.3.1 | None | SRR12199418 | Sensitive | lineage2.2.1 | None | SRR12199393 | Sensitive | lineage1.2.1.2.1 | None | SRR16149130 | MDR-TB | lineage4.2.2.1 | None | SRR12199460 | HR-TB | lineage2.2.1.1 | None | SRR16099305 | Sensitive | lineage4.3.4.2 | None | SRR13986568 | Other | La1.2 | None | SRR2099936 | RR-TB | lineage4.8.2 | None | SRR18910193 | HR-TB | lineage2.2 | None | ERR2229577 | Sensitive | lineage4.8 | None | SRR2100849 | HR-TB | lineage3 | None | ERR4815762 | Sensitive | lineage4.3.4.2.1 | gb | ERR4814442 | Other | lineage4.4.1.1 | None | ERR4815324 | Sensitive | lineage4.3.2 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4815436 | Sensitive | lineage4.8 | None | ERR4815456 | Sensitive | lineage3 | None | ERR4815001 | Sensitive | lineage3.1.3 | None | ERR4815507 | Sensitive | lineage4.1.1 | gb | ERR2229545 | Sensitive | lineage4.8 | None | ERR2229543 | Other | lineage4.8 | dk | ERR2229070 | Sensitive | lineage4.8 | None | ERR2229010 | Sensitive | lineage4 | None | ERR2229134 | HR-TB | lineage4.8 | None | ERR2229180 | Other | lineage4 | None | ERR2229588 | Sensitive | lineage4.8 | None | ERR4817088 | Other | lineage3.1.2 | None | SRR3675573 | Sensitive | lineage4.8 | None | ERR2229186 | Sensitive | lineage4.8 | None | ERR2229208 | Sensitive | lineage4.8 | None | ERR2229607 | HR-TB | lineage4.8 | None | ERR2229766 | Sensitive | lineage4.8 | None | ERR2229614 | Sensitive | lineage4.8 | None | ERR2229609 | Sensitive | lineage4.8 | None | ERR4816516 | Sensitive | lineage4.3.4.2 | gb | ERR2229620 | Sensitive | lineage4.8 | None | ERR2229219 | Sensitive | lineage4.8 | None | ERR2229246 | Sensitive | lineage4.8 | None | ERR2229564 | Sensitive | lineage4.8 | dk | ERR2229765 | Sensitive | lineage4.8 | dk | ERR2229291 | Sensitive | lineage4.8 | None | ERR2229301 | Sensitive | lineage4.8 | None | ERR2229315 | Sensitive | lineage4 | None | ERR2229300 | Sensitive | lineage4.8 | None | ERR2229320 | Sensitive | lineage4.8 | None | ERR2229343 | Sensitive | lineage4.8 | dk | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229389 | RR-TB | lineage4 | None | ERR2229376 | Other | lineage4.8 | None | ERR2229379 | HR-TB | lineage4.8 | None | ERR2229683 | Sensitive | lineage4.8 | dk | ERR2229405 | Sensitive | lineage4 | None | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229418 | Sensitive | lineage4.8 | None | ERR2229424 | Sensitive | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229426 | HR-TB | lineage4.8 | dk | ERR2229447 | Sensitive | lineage4.8 | None | ERR2229432 | Sensitive | lineage4.8 | dk | ERR2229446 | Sensitive | lineage4.8 | None | ERR2229795 | Sensitive | lineage4.8 | None | ERR2229477 | Sensitive | lineage4.8 | None | ERR2229487 | Sensitive | lineage4.8 | None | ERR4816847 | Sensitive | lineage4.1.1 | gb | ERR2229492 | Sensitive | lineage4.8 | None | ERR2228901 | Sensitive | lineage4.8 | dk | ERR2245304 | Sensitive | lineage3.1.1 | no | ERR4818739 | Sensitive | lineage3 | gb | ERR4817798 | Sensitive | lineage4.1.1 | gb | ERR2513895 | Sensitive | lineage4.8 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818908 | Other | La1.2.BCG | None | ERR2503372 | Sensitive | lineage4.8 | None | ERR2513306 | Sensitive | lineage4.1.2.1 | None | ERR2512923 | Sensitive | lineage3 | None | ERR4819154 | Sensitive | lineage4.1.1.3 | None | ERR2513700 | Other | lineage4.4.1.1 | gb | ERR4818024 | Sensitive | lineage3 | gb | ERR4818582 | Sensitive | lineage1.1.2 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR4818619 | Sensitive | lineage3 | None | ERR4817607 | Sensitive | lineage4.2.1.1 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819207 | Sensitive | lineage3 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4819313 | Other | lineage3.1.1 | None | ERR2514230 | Sensitive | lineage3.1.3 | gb | ERR4819734 | RR-TB | lineage3 | gb | ERR2514623 | Sensitive | lineage4.1.1 | gb | ERR4819786 | Sensitive | lineage2.2.1 | None | ERR2514766 | Sensitive | lineage4.1.1.3 | gb | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR4820148 | Other | lineage2.2.1 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045432 | Other | lineage3 | gb | SRR6045474 | HR-TB | lineage2.2.1 | None | ERR2659166 | Sensitive | None | ERR270747 | HR-TB | lineage3 | None | ERR4821482 | Sensitive | lineage3 | None | ERR4821207 | Other | lineage2.2.1 | gb | SRR6045744 | Other | lineage3.1.2 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | ERR4821584 | Other | lineage4.8.2 | None | SRR6785547 | Sensitive | lineage4.2.1 | None | ERR4831743 | HR-TB | lineage4.1.2.1 | None | SRR6044817 | Other | lineage3 | None | SRR6046556 | HR-TB | lineage1.2.2.2 | None | SRR6046604 | Sensitive | lineage2.2.1 | None | SRR6485165 | MDR-TB | lineage4.2.1.1 | None |
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