lineage | Count |
---|---|
lineage4 | 3 |
lineage4.3.4.2 | 1 |
lineage4.9 | 3 |
lineage4.1.2.1 | 4 |
lineage4.3.3 | 2 |
lineage4.8 | 14 |
lineage3 | 2 |
lineage1.1.2 | 3 |
lineage4.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1 | 2 |
lineage2.1 | 2 |
lineage2.2.1 | 10 |
lineage1.1.1.1 | 1 |
lineage4.5 | 2 |
lineage4.2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.6 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR1950004 | HR-TB | lineage4 | None | SRR13583406 | MDR-TB | lineage4.3.4.2 | None | SRR13736074 | Sensitive | lineage4.9 | None | SRR14164723 | Sensitive | lineage4.1.2.1 | None | SRR21239961 | Sensitive | lineage4.3.3 | None | ERR2229365 | Sensitive | lineage4.8 | None | ERR2229040 | Sensitive | lineage4 | None | ERR2229186 | Sensitive | lineage4.8 | None | ERR2229747 | Sensitive | lineage4.8 | dk | ERR2229387 | Sensitive | lineage4.8 | None | ERR2229401 | Sensitive | lineage4.8 | None | ERR2228819 | RR-TB | lineage4.8 | None | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229685 | Other | lineage4.8 | None | ERR2229704 | Sensitive | lineage4.8 | None | ERR2229718 | Sensitive | lineage4.8 | None | ERR2228831 | RR-TB | lineage4.8 | None | ERR2229729 | Sensitive | lineage4 | None | ERR4818859 | Sensitive | lineage4.8 | gb | ERR2510499 | Pre-XDR-TB | lineage3 | None | ERR2510605 | Pre-XDR-TB | lineage1.1.2 | None | ERR2510617 | MDR-TB | lineage4.8 | None | ERR2510251 | MDR-TB | lineage4.2.1 | None | ERR4819262 | Other | lineage4.1.2.1 | None | ERR2510427 | Pre-XDR-TB | lineage4.9 | None | SRR5818593 | Sensitive | lineage4.2.2.2 | dj | ERR2653042 | Other | lineage4.1.1 | None | ERR2843486 | HR-TB | lineage2.1 | None | SRR5818657 | Sensitive | lineage1.1.2 | dj | ERR2843494 | HR-TB | lineage2.2.1 | None | ERR4828490 | Other | lineage1.1.1.1 | None | ERR4828281 | HR-TB | lineage2.2.1 | None | ERR4828540 | Sensitive | lineage2.2.1 | vn | ERR4828537 | HR-TB | lineage2.2.1 | vn | ERR4828528 | Sensitive | lineage2.2.1 | None | ERR4828669 | HR-TB | lineage2.2.1 | None | ERR4828598 | Sensitive | lineage4.5 | vn | ERR4828566 | HR-TB | lineage2.1 | vn | ERR4828718 | HR-TB | lineage2.2.1 | vn | ERR4828699 | HR-TB | lineage4.5 | vn | ERR4828725 | Sensitive | lineage2.2.1 | vn | ERR4828743 | Sensitive | lineage2.2.1 | vn | ERR4828752 | Sensitive | lineage2.2.1 | vn | ERR4828757 | Sensitive | lineage4.2.2 | vn | ERR4811452 | Other | lineage1.1.2 | None | SRR9971235 | XDR-TB | lineage4.4.1.1.1 | None | ERR11043061 | Sensitive | lineage4.9 | None | ERR4811425 | Sensitive | lineage4.1.2.1 | None | ERR4828818 | MDR-TB | lineage4.8 | None | SRR7131189 | Sensitive | lineage4.4.1.1 | None | ERR10465934 | Sensitive | lineage4.6 | None | ERR4811402 | Sensitive | lineage3 | None | ERR4811401 | Sensitive | lineage4.1.2.1 | None | ERR7821159 | Sensitive | lineage4.1.1 | None | ERR7821181 | Sensitive | lineage4.3.2.1 | None | ERR7911359 | HR-TB | lineage4.3.3 | None |
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