Rv1979c - c.-518C>G
Drug resistance types
220 Sensitive
6 RR-TB
0 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 146 |
| lineage4.1.1.3;lineage4.9 | 84 |
| lineage4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 231 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1225551 | Sensitive | lineage4.1.1.3 | None | SRR2000333 | Sensitive | lineage4.1.1.3 | None | SRR1215477 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1214339 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1214565 | Sensitive | lineage4.1.1.3 | None | SRR1222213 | Sensitive | lineage4.1.1.3 | None | SRR23080335 | Sensitive | lineage4.1.1.3 | None | SRR16370679 | Other | lineage4.1.1.3 | None | SRR1218156 | Sensitive | lineage4.1.1.3 | None | SRR1232642 | Sensitive | lineage4.1.1.3 | None | SRR2000344 | Sensitive | lineage4.1.1.3 | None | SRR1214377 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1218586 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221258 | Sensitive | lineage4.1.1.3 | None | SRR1216230 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6131529 | RR-TB | lineage4.1.1.3 | None | SRR6131517 | Sensitive | lineage4.1.1.3 | None | SRR21657447 | Sensitive | lineage4.1.1.3 | None | SRR1215685 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1219120 | Sensitive | lineage4.1.1.3 | None | SRR1220522 | Sensitive | lineage4.1.1.3 | None | SRR1221145 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222556 | Sensitive | lineage4.1.1.3 | None | SRR1222935 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1223019 | Sensitive | lineage4.1.1.3 | None | SRR1229545 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1231668 | Sensitive | lineage4.1.1.3 | None | SRR2000335 | Sensitive | lineage4.1.1.3 | None | SRR1223317 | Sensitive | lineage4.1.1.3 | None | SRR1232701 | Sensitive | lineage4.1.1.3 | None | SRR023481 | RR-TB | lineage4.1.1.3 | None | SRR1220071 | Sensitive | lineage4.1.1.3 | None | SRR1231661 | Sensitive | lineage4.1.1.3 | None | SRR1225398 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1230901 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221387 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222881 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222905 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222953 | Sensitive | lineage4.1.1.3 | None | SRR1220543 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1218989 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1215719 | Sensitive | lineage4.1.1.3 | None | SRR1221173 | Sensitive | lineage4.1.1.3 | None | SRR1232767 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR2000339 | Sensitive | lineage4.1.1.3 | None | SRR17657977 | Sensitive | lineage4.1.1.3 | None | SRR1221379 | Sensitive | lineage4.1.1.3 | None | SRR1221519 | Sensitive | lineage4.1.1.3 | None | SRR1222767 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1224280 | Sensitive | lineage4.1.1.3 | None | SRR1218483 | Sensitive | lineage4.1.1.3 | None | SRR1222629 | Sensitive | lineage4.1.1.3 | None | SRR1222998 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR2000332 | Sensitive | lineage4.1.1.3 | None | SRR1228652 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1231770 | Sensitive | lineage4.1.1.3 | None | SRR1231809 | Sensitive | lineage4.1.1.3 | None | SRR2000341 | Sensitive | lineage4.1.1.3 | None | SRR1229472 | Sensitive | lineage4.1.1.3 | None | SRR1230629 | Sensitive | lineage4.1.1.3 | None | SRR1214964 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR29055439 | Sensitive | lineage4.1.1.3 | None | SRR1220250 | Sensitive | lineage4.1.1.3 | None | SRR1218627 | Sensitive | lineage4.1.1.3 | None | SRR023486 | RR-TB | lineage4.1.1.3 | None | SRR1223200 | Sensitive | lineage4.1.1.3 | None | SRR22248484 | Sensitive | lineage4.1.1.3 | None | SRR1233645 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR2000338 | Sensitive | lineage4.1.1.3 | None | SRR1215890 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR29055409 | MDR-TB | lineage4.1.1.3 | None | SRR1221537 | Sensitive | lineage4.1.1.3 | None | SRR6131515 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1218221 | Sensitive | lineage4.1.1.3 | None | SRR1232744 | Sensitive | lineage4.1.1.3 | None | SRR1221369 | Sensitive | lineage4.1.1.3 | None | SRR1223062 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR2000346 | Sensitive | lineage4.1.1.3 | None | SRR29055710 | Sensitive | lineage4.1.1.3 | None | SRR1216249 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222635 | Sensitive | lineage4.1.1.3 | None | SRR1220952 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1220067 | Sensitive | lineage4.1.1.3 | None | SRR1232514 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1232623 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6131510 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221611 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6131528 | Sensitive | lineage4.1.1.3 | None | SRR1221348 | Sensitive | lineage4.1.1.3 | None | SRR1216241 | Sensitive | lineage4.1.1.3 | None | SRR1227231 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1233508 | Sensitive | lineage4.1.1.3 | None | SRR19233769 | Other | lineage4.1.1.3 | None | SRR1214509 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1215728 | Sensitive | lineage4.1.1.3 | None | SRR1229603 | Sensitive | lineage4.1.1.3 | None | SRR1051196 | Sensitive | lineage4.1.1.3 | None | SRR1221312 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1216218 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1231419 | Sensitive | lineage4.1.1.3 | None | SRR1226211 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221406 | Sensitive | lineage4.1.1.3 | None | SRR16370445 | Sensitive | lineage4.1.1.3 | None | SRR1221039 | Sensitive | lineage4.1.1.3 | None | SRR1232784 | Sensitive | lineage4.1.1.3 | None | SRR1231656 | Sensitive | lineage4.1.1.3 | None | SRR1225211 | Sensitive | lineage4.1.1.3 | None | SRR1225496 | Sensitive | lineage4.1.1.3 | None | SRR21658753 | Sensitive | lineage4.1.1.3 | None | SRR1229465 | Sensitive | lineage4.1.1.3 | None | SRR1231336 | Sensitive | lineage4.1.1.3 | None | SRR1226755 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1231693 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1214108 | Sensitive | lineage4.1.1.3 | None | SRR1233608 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1220563 | Sensitive | lineage4.1.1.3 | None | SRR2000342 | Sensitive | lineage4.1.1.3 | None | SRR1220251 | Sensitive | lineage4.1.1.3 | None | SRR1214726 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1227504 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1215527 | Sensitive | lineage4.1.1.3 | None | SRR17657930 | Sensitive | lineage4.1.1.3 | None | SRR1227478 | Sensitive | lineage4.1.1.3 | None | SRR1221411 | Sensitive | lineage4.1.1.3 | None | SRR1216246 | Sensitive | lineage4.1.1.3 | None | SRR1232090 | Sensitive | lineage4.1.1.3 | None | SRR1215362 | Sensitive | lineage4.1.1.3 | None | SRR1230307 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1223051 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1214751 | Sensitive | lineage4.1.1.3 | None | SRR1222628 | Sensitive | lineage4.1.1.3 | None | SRR1232655 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1214023 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR17658036 | Sensitive | lineage4.1.1.3 | None | SRR1215648 | Sensitive | lineage4.1.1.3 | None | SRR6131511 | Sensitive | lineage4.1.1.3 | None | SRR29053006 | Sensitive | lineage4.1.1.3 | None | SRR1229486 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221179 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222852 | Sensitive | lineage4.1.1.3 | None | SRR1214908 | Sensitive | lineage4.1.1.3 | None | SRR1222278 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1231694 | Sensitive | lineage4.1.1.3 | None | SRR2000334 | Sensitive | lineage4.1.1.3 | None | SRR1215496 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1231778 | Sensitive | lineage4.1.1.3 | None | SRR1223348 | Sensitive | lineage4.1.1.3 | None | SRR1232471 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1232700 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6131509 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR16370449 | Sensitive | lineage4.1.1.3 | None | ERR11138638 | Sensitive | lineage4.1.1.3 | None | SRR1215017 | Sensitive | lineage4.1.1.3 | None | SRR1215889 | Sensitive | lineage4.1.1.3 | None | SRR1218878 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222362 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1223227 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1232616 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR026446 | Sensitive | lineage4.1.1.3 | None | SRR1218736 | Sensitive | lineage4.1.1.3 | None | SRR1220252 | Sensitive | lineage4.1;lineage4.9 | None | SRR28170701 | MDR-TB | lineage4.1.1.3 | None | SRR1221165 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1232723 | Sensitive | lineage4.1.1.3 | None | SRR1223079 | Sensitive | lineage4.1.1.3 | None | SRR1214744 | Sensitive | lineage4.1.1.3 | None | SRR023483 | RR-TB | lineage4.1.1.3 | None | SRR1222373 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1225317 | Sensitive | lineage4.1.1.3 | None | SRR1228638 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1230253 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1220094 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1214049 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222187 | Sensitive | lineage4.1.1.3 | None | SRR28858693 | MDR-TB | lineage4.1.1.3 | None | SRR23080329 | Sensitive | lineage4.1.1.3 | None | SRR1051197 | Sensitive | lineage4.1.1.3 | None | SRR1229367 | Sensitive | lineage4.1.1.3 | None | SRR2000343 | Sensitive | lineage4.1.1.3 | None | SRR1231630 | Sensitive | lineage4.1.1.3 | None | SRR1214752 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1214971 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221416 | Sensitive | lineage4.1.1.3 | None | SRR1221649 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1225402 | Sensitive | lineage4.1.1.3 | None | SRR6131508 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1218482 | Sensitive | lineage4.1.1.3 | None | SRR1219991 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222922 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221412 | Sensitive | lineage4.1.1.3 | None | SRR1225521 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6131523 | RR-TB | lineage4.1.1.3 | None | SRR1226249 | Sensitive | lineage4.1.1.3 | None | SRR2000336 | Sensitive | lineage4.1.1.3 | None | SRR1218735 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1221365 | Sensitive | lineage4.1.1.3 | None | SRR1229963 | Sensitive | lineage4.1.1.3 | None | SRR1218953 | Sensitive | lineage4.1.1.3 | None | SRR1232621 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1232061 | Sensitive | lineage4.1.1.3 | None | SRR1218881 | Sensitive | lineage4.1.1.3 | None | SRR2000340 | Sensitive | lineage4.1.1.3 | None | SRR1215921 | Sensitive | lineage4.1.1.3 | None | SRR1223212 | Sensitive | lineage4.1.1.3 | None | SRR1232772 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1224488 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6131512 | Sensitive | lineage4.1.1.3 | None | SRR1221366 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222639 | Sensitive | lineage4.1.1.3 | None | SRR1232041 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1232056 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222354 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1224556 | Sensitive | lineage4.1.1.3 | None | SRR23080334 | Sensitive | lineage4.1.1.3 | None | SRR1218481 | Sensitive | lineage4.1.1.3 | None | SRR1221543 | Sensitive | lineage4.1.1.3 | None | SRR1231677 | Sensitive | lineage4.1.1.3 | None | SRR023482 | Sensitive | lineage4.1.1.3 | None | SRR1231757 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1222369 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1228633 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR23080333 | Sensitive | lineage4.1.1.3 | None | SRR1231384 | Sensitive | lineage4.1.1.3 | None | SRR1222800 | Sensitive | lineage4.1.1.3 | None | SRR1222939 | Sensitive | lineage4.1.1.3 | None | SRR1223379 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1228694 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1229558 | Sensitive | lineage4.1.1.3 | None | SRR1232519 | Sensitive | lineage4.1.1.3 | None | SRR6131514 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6131524 | RR-TB | lineage4.1.1.3;lineage4.9 | None |
|---|
