Rv1979c - c.-599C>T
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
302 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 302 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 303 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR841867 | Other | La1.8.1 | None | ERR11893511 | Other | La1.8.1 | None | ERR11893549 | Other | La1.8.1 | None | ERR11893488 | Other | La1.8.1 | None | ERR11893515 | Other | La1.8.1 | None | ERR11893535 | Other | La1.8.1 | None | ERR841816 | Other | La1.8.1 | None | ERR841827 | Other | La1.8.1 | None | ERR841836 | Other | La1.8.1 | None | ERR841831 | Other | La1.8.1 | None | ERR841878 | Other | La1.8.1 | None | ERR841887 | Other | La1.8.1 | None | SRR23174549 | Other | La1.8.1 | None | ERR841892 | Other | La1.8.1 | None | ERR11893479 | Other | La1.8.1 | None | ERR11893550 | Other | La1.8.1 | None | ERR841802 | Other | La1.8.1 | None | ERR841829 | Other | La1.8.1 | None | ERR841842 | Other | La1.8.1 | None | ERR841889 | Other | La1.8.1 | None | SRR23174308 | Other | La1.8.1 | None | ERR125611 | Other | La1.8.1 | ie | ERR11893547 | Other | La1.8.1 | None | ERR11893491 | Other | La1.8.1 | None | ERR11893508 | Other | La1.8.1 | None | ERR11893556 | Other | La1.8.1 | None | ERR5087756 | Other | La1.8.1 | None | ERR5087773 | Other | La1.8.1 | None | ERR11893559 | Other | La1.8.1 | None | ERR11893482 | Other | La1.8.1 | None | SRR23174159 | Other | La1.8.1 | None | ERR11893446 | Other | La1.8.1 | None | ERR11893460 | Other | La1.8.1 | None | ERR841849 | Other | La1.8.1 | None | ERR841898 | Other | La1.8.1 | None | ERR125606 | Other | La1.8.1 | ie | ERR125619 | Other | La1.8.1 | ie | SRR23174535 | Other | La1.8.1 | None | ERR841847 | Other | La1.8.1 | None | ERR125626 | Other | La1.8.1 | ie | ERR841846 | Other | La1.8.1 | None | ERR841895 | Other | La1.8.1 | None | ERR841896 | Other | La1.8.1 | None | ERR841905 | Other | La1.8.1 | None | ERR11893448 | Other | La1.8.1 | None | SRR23174181 | Other | La1.8.1 | None | ERR841809 | Other | La1.8.1 | None | ERR11893521 | Other | La1.8.1 | None | ERR125609 | Other | La1.8.1 | ie | SRR23174540 | Other | La1.8.1 | None | ERR841893 | Other | La1.8.1 | None | ERR11893506 | Other | La1.8.1 | None | ERR841860 | Other | La1.8.1 | None | ERR841801 | Other | La1.8.1 | None | ERR11893464 | Other | La1.8.1 | None | ERR841839 | Other | La1.8.1 | None | ERR5087507 | Other | La1.8.1 | None | ERR11893543 | Other | La1.8.1 | None | ERR4831622 | MDR-TB | lineage2.2.1 | vn | ERR841813 | Other | La1.8.1 | None | ERR125621 | Other | La1.8.1 | ie | ERR11893544 | Other | La1.8.1 | None | ERR841865 | Other | La1.8.1 | None | ERR11893445 | Other | La1.8.1 | None | ERR11893484 | Other | La1.8.1 | None | ERR11893456 | Other | La1.8.1 | None | ERR841823 | Other | La1.8.1 | None | ERR841854 | Other | La1.8.1 | None | ERR841853 | Other | La1.8.1 | None | ERR11893458 | Other | La1.8.1 | None | ERR11893474 | Other | La1.8.1 | None | ERR11893481 | Other | La1.8.1 | None | ERR841850 | Other | La1.8.1 | None | ERR125598 | Other | La1.8.1 | ie | ERR5087834 | Other | La1.8.1 | None | ERR11893466 | Other | La1.8.1 | None | SRR23174064 | Other | La1.8.1 | None | ERR11893537 | Other | La1.8.1 | None | ERR841882 | Other | La1.8.1 | None | ERR125616 | Other | La1.8.1 | ie | ERR11893489 | Other | La1.8.1 | None | ERR11893492 | Other | La1.8.1 | None | ERR11893457 | Other | La1.8.1 | None | ERR841824 | Other | La1.8.1 | None | SRR23174551 | Other | La1.8.1 | None | ERR841800 | Other | La1.8.1 | None | ERR841872 | Other | La1.8.1 | None | ERR841888 | Other | La1.8.1 | None | ERR841789 | Other | La1.8.1 | None | ERR841794 | Other | La1.8.1 | None | ERR841848 | Other | La1.8.1 | None | ERR125623 | Other | La1.8.1 | ie | ERR4627385 | Other | La1.8.1 | None | ERR11893542 | Other | La1.8.1 | None | ERR11893517 | Other | La1.8.1 | None | ERR11893534 | Other | La1.8.1 | None | ERR125628 | Other | La1.8.1 | ie | SRR23174550 | Other | La1.8.1 | None | ERR5087808 | Other | La1.8.1 | None | ERR841837 | Other | La1.8.1 | None | SRR23174546 | Other | La1.8.1 | None | ERR11893513 | Other | La1.8.1 | None | ERR11893526 | Other | La1.8.1 | None | ERR11893529 | Other | La1.8.1 | None | ERR125622 | Other | La1.8.1 | ie | SRR23174544 | Other | La1.8.1 | None | ERR841902 | Other | La1.8.1 | None | ERR841879 | Other | La1.8.1 | None | ERR841804 | Other | La1.8.1 | None | ERR841885 | Other | La1.8.1 | None | SRR23174553 | Other | La1.8.1 | None | ERR11893530 | Other | La1.8.1 | None | ERR125618 | Other | La1.8.1 | ie | ERR11893540 | Other | La1.8.1 | None | ERR125608 | Other | La1.8.1 | ie | ERR841796 | Other | La1.8.1 | None | ERR841863 | Other | La1.8.1 | None | ERR841900 | Other | La1.8.1 | None | ERR11893546 | Other | La1.8.1 | None | ERR11893533 | Other | La1.8.1 | None | ERR11893545 | Other | La1.8.1 | None | ERR841873 | Other | La1.8.1 | None | ERR841875 | Other | La1.8.1 | None | ERR11893459 | Other | La1.8.1 | None | ERR11893524 | Other | La1.8.1 | None | ERR4627387 | Other | La1.8.1 | None | ERR125603 | Other | La1.8.1 | ie | ERR841820 | Other | La1.8.1 | None | ERR125615 | Other | La1.8.1 | ie | ERR125612 | Other | La1.8.1 | ie | ERR11893536 | Other | La1.8.1 | None | ERR11893507 | Other | La1.8.1 | None | ERR11893454 | Other | La1.8.1 | None | ERR11893538 | Other | La1.8.1 | None | ERR11893475 | Other | La1.8.1 | None | ERR11893509 | Other | La1.8.1 | None | SRR23174538 | Other | La1.8.1 | None | ERR4627386 | Other | La1.8.1 | None | ERR841808 | Other | La1.8.1 | None | ERR841832 | Other | La1.8.1 | None | SRR23174036 | Other | La1.8.1 | None | SRR23174539 | Other | La1.8.1 | None | ERR11893470 | Other | La1.8.1 | None | ERR841869 | Other | La1.8.1 | None | ERR11893462 | Other | La1.8.1 | None | ERR11893531 | Other | La1.8.1 | None | ERR11893444 | Other | La1.8.1 | None | ERR841894 | Other | La1.8.1 | None | ERR841901 | Other | La1.8.1 | None | ERR11893514 | Other | La1.8.1 | None | ERR11893442 | Other | La1.8.1 | None | ERR11893557 | Other | La1.8.1 | None | ERR11893478 | Other | La1.8.1 | None | ERR841852 | Other | La1.8.1 | None | ERR841818 | Other | La1.8.1 | None | ERR125617 | Other | La1.8.1 | ie | ERR125602 | Other | La1.8.1 | ie | ERR11893505 | Other | La1.8.1 | None | SRR23174044 | Other | La1.8.1 | None | ERR11893558 | Other | La1.8.1 | None | SRR23174548 | Other | La1.8.1 | None | ERR841891 | Other | La1.8.1 | None | ERR11893498 | Other | La1.8.1 | None | ERR11893555 | Other | La1.8.1 | None | ERR841890 | Other | La1.8.1 | None | ERR11893472 | Other | La1.8.1 | None | ERR841871 | Other | La1.8.1 | None | ERR11893452 | Other | La1.8.1 | None | ERR11893469 | Other | La1.8.1 | None | ERR11893527 | Other | La1.8.1 | None | ERR11893453 | Other | La1.8.1 | None | ERR11893463 | Other | La1.8.1 | None | ERR841810 | Other | La1.8.1 | None | ERR841834 | Other | La1.8.1 | None | SRR15296932 | Other | La1.8.1 | None | ERR841903 | Other | La1.8.1 | None | ERR11893519 | Other | La1.8.1 | None | ERR125605 | Other | La1.8.1 | ie | ERR11893525 | Other | La1.8.1 | None | ERR125614 | Other | La1.8.1 | ie | ERR841811 | Other | La1.8.1 | None | SRR23174269 | Other | La1.8.1 | None | ERR11893485 | Other | La1.8.1 | None | ERR11893553 | Other | La1.8.1 | None | ERR125601 | Other | La1.8.1 | ie | ERR841838 | Other | La1.8.1 | None | ERR841798 | Other | La1.8.1 | None | ERR841799 | Other | La1.8.1 | None | ERR841807 | Other | La1.8.1 | None | ERR125599 | Other | La1.8.1 | ie | SRR23174537 | Other | La1.8.1 | None | ERR125625 | Other | La1.8.1 | ie | ERR841864 | Other | La1.8.1 | None | ERR11893494 | Other | La1.8.1 | None | SRR23174498 | Other | La1.8.1 | None | ERR841793 | Other | La1.8.1 | None | ERR11893467 | Other | La1.8.1 | None | ERR11893490 | Other | La1.8.1 | None | ERR11893493 | Other | La1.8.1 | None | ERR841835 | Other | La1.8.1 | None | ERR11893487 | Other | La1.8.1 | None | ERR11893518 | Other | La1.8.1 | None | ERR11893473 | Other | La1.8.1 | None | ERR841790 | Other | La1.8.1 | None | ERR841843 | Other | La1.8.1 | None | SRR23174555 | Other | La1.8.1 | None | ERR11893500 | Other | La1.8.1 | None | ERR11893539 | Other | La1.8.1 | None | ERR11893465 | Other | La1.8.1 | None | ERR11893483 | Other | La1.8.1 | None | ERR841788 | Other | La1.8.1 | None | ERR841787 | Other | La1.8.1 | None | ERR841803 | Other | La1.8.1 | None | ERR841825 | Other | La1.8.1 | None | ERR841845 | Other | La1.8.1 | None | ERR841851 | Other | La1.8.1 | None | ERR841862 | Other | La1.8.1 | None | SRR23174552 | Other | La1.8.1 | None | ERR841880 | Other | La1.8.1 | None | ERR11893520 | Other | La1.8.1 | None | ERR841812 | Other | La1.8.1 | None | ERR841821 | Other | La1.8.1 | None | ERR125607 | Other | La1.8.1 | ie | SRR23174545 | Other | La1.8.1 | None | ERR11893523 | Other | La1.8.1 | None | ERR11893495 | Other | La1.8.1 | None | ERR11893510 | Other | La1.8.1 | None | ERR11893551 | Other | La1.8.1 | None | ERR11893450 | Other | La1.8.1 | None | ERR841870 | Other | La1.8.1 | None | ERR11893512 | Other | La1.8.1 | None | ERR841817 | Other | La1.8.1 | None | SRR23174038 | Other | La1.8.1 | None | ERR11893449 | Other | La1.8.1 | None | ERR841828 | Other | La1.8.1 | None | ERR841814 | Other | La1.8.1 | None | ERR841792 | Other | La1.8.1 | None | ERR125624 | Other | La1.8.1 | ie | ERR11893461 | Other | La1.8.1 | None | ERR841826 | Other | La1.8.1 | None | ERR841883 | Other | La1.8.1 | None | ERR841841 | Other | La1.8.1 | None | ERR11893476 | Other | La1.8.1 | None | ERR841815 | Other | La1.8.1 | None | ERR841855 | Other | La1.8.1 | None | ERR841856 | Other | La1.8.1 | None | ERR841868 | Other | La1.8.1 | None | ERR841791 | Other | La1.8.1 | None | ERR841881 | Other | La1.8.1 | None | ERR125620 | Other | La1.8.1 | ie | ERR841822 | Other | La1.8.1 | None | ERR11893501 | Other | La1.8.1 | None | ERR11893522 | Other | La1.8.1 | None | ERR841833 | Other | La1.8.1 | None | ERR841844 | Other | La1.8.1 | None | ERR11893471 | Other | La1.8.1 | None | ERR841858 | Other | La1.8.1 | None | ERR11893443 | Other | La1.8.1 | None | ERR11893451 | Other | La1.8.1 | None | ERR11893486 | Other | La1.8.1 | None | ERR11893541 | Other | La1.8.1 | None | ERR11893480 | Other | La1.8.1 | None | ERR11893554 | Other | La1.8.1 | None | ERR11893504 | Other | La1.8.1 | None | ERR11893528 | Other | La1.8.1 | None | ERR841840 | Other | La1.8.1 | None | ERR11893502 | Other | La1.8.1 | None | SRR23174033 | Other | La1.8.1 | None | ERR841859 | Other | La1.8.1 | None | SRR23174547 | Other | La1.8.1 | None | ERR11893516 | Other | La1.8.1 | None | ERR11893552 | Other | La1.8.1 | None | ERR841884 | Other | La1.8.1 | None | ERR841857 | Other | La1.8.1 | None | ERR841806 | Other | La1.8.1 | None | ERR11893532 | Other | La1.8.1 | None | ERR11893468 | Other | La1.8.1 | None | ERR841861 | Other | La1.8.1 | None | ERR11893497 | Other | La1.8.1 | None | ERR5087840 | Other | La1.8.1 | None | SRR23174147 | Other | La1.8.1 | None | ERR841877 | Other | La1.8.1 | None | ERR11893455 | Other | La1.8.1 | None | ERR11893447 | Other | La1.8.1 | None | ERR841797 | Other | La1.8.1 | None | ERR11893496 | Other | La1.8.1 | None | ERR841830 | Other | La1.8.1 | None | ERR841897 | Other | La1.8.1 | None | ERR841805 | Other | La1.8.1 | None | ERR841795 | Other | La1.8.1 | None | SRR23174198 | Other | La1.8.1 | None | ERR841899 | Other | La1.8.1 | None | SRR23174057 | Other | La1.8.1 | None | ERR841819 | Other | La1.8.1 | None | SRR23174015 | Other | La1.8.1 | None | ERR125627 | Other | La1.8.1 | ie | ERR11893477 | Other | La1.8.1 | None | SRR23174536 | Other | La1.8.1 | None | ERR125604 | Other | La1.8.1 | ie | ERR125613 | Other | La1.8.1 | ie | SRR23174257 | Other | La1.8.1 | None | ERR125600 | Other | La1.8.1 | ie | ERR125610 | Other | La1.8.1 | ie |
|---|
