Rv1979c - c.-8681_*660del

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
0 Sensitive 0 RR-TB 92 HR-TB 1 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 1 Other
lineage Counts
lineage Count
La1.2.BCG 93
La1.2.BCG;lineage4 1
spoligotype Counts
spoligotype Count
None 94
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045637 HR-TB La1.2.BCG None
ERR212052 HR-TB La1.2.BCG;lineage4 mw
SRR29831039 HR-TB La1.2.BCG None
ERR4829642 HR-TB La1.2.BCG it
SRR3675257 HR-TB La1.2.BCG gb
SRR1735661 HR-TB La1.2.BCG gb
SRR1735643 HR-TB La1.2.BCG gb
SRR1735706 HR-TB La1.2.BCG gb
SRR1735703 HR-TB La1.2.BCG gb
SRR1735681 HR-TB La1.2.BCG gb
ERR4819826 HR-TB La1.2.BCG None
ERR4821748 HR-TB La1.2.BCG None
SRR16058482 HR-TB La1.2.BCG None
ERR13291607 HR-TB La1.2.BCG None
ERR13291579 HR-TB La1.2.BCG None
ERR13291507 HR-TB La1.2.BCG None
ERR13291503 HR-TB La1.2.BCG None
ERR13285360 HR-TB La1.2.BCG None
ERR13291266 HR-TB La1.2.BCG None
SRR29440878 HR-TB La1.2.BCG None
ERR4820009 HR-TB La1.2.BCG gb
ERR4829455 HR-TB La1.2.BCG it
ERR4829633 HR-TB La1.2.BCG it
ERR2516191 HR-TB La1.2.BCG be
ERR2516376 HR-TB La1.2.BCG be
ERR2516307 HR-TB La1.2.BCG be
ERR2516311 HR-TB La1.2.BCG be
ERR2516215 HR-TB La1.2.BCG be
ERR4829644 HR-TB La1.2.BCG it
ERR4814867 HR-TB La1.2.BCG gb
ERR4815180 HR-TB La1.2.BCG gb
ERR4815226 HR-TB La1.2.BCG gb
ERR4815533 HR-TB La1.2.BCG gb
ERR4815781 HR-TB La1.2.BCG gb
ERR4816167 HR-TB La1.2.BCG gb
ERR4816595 HR-TB La1.2.BCG gb
ERR4816682 HR-TB La1.2.BCG gb
ERR4817185 HR-TB La1.2.BCG gb
ERR4817318 HR-TB La1.2.BCG gb
ERR4817421 HR-TB La1.2.BCG gb
ERR4818297 HR-TB La1.2.BCG gb
SRR29604864 HR-TB La1.2.BCG None
SRR29440554 HR-TB La1.2.BCG None
ERR13285578 HR-TB La1.2.BCG None
ERR13292407 HR-TB La1.2.BCG None
SRR28409494 HR-TB La1.2.BCG None
SRR9596067 HR-TB La1.2.BCG None
ERR13291185 HR-TB La1.2.BCG None
SRR29440592 HR-TB La1.2.BCG None
ERR13291301 HR-TB La1.2.BCG None
SRR29441134 HR-TB La1.2.BCG None
SRR29440659 HR-TB La1.2.BCG None
ERR13291408 HR-TB La1.2.BCG None
ERR4820780 MDR-TB La1.2.BCG gb
SAMN02414848 HR-TB La1.2.BCG se
ERR4829543 HR-TB La1.2.BCG it
ERR4829548 HR-TB La1.2.BCG it
ERR13291539 Other La1.2.BCG None
ERR4818422 HR-TB La1.2.BCG gb
ERR4818704 HR-TB La1.2.BCG gb
ERR4818819 HR-TB La1.2.BCG gb
ERR4819064 HR-TB La1.2.BCG gb
ERR4819270 HR-TB La1.2.BCG gb
ERR4819733 HR-TB La1.2.BCG gb
ERR4820343 HR-TB La1.2.BCG gb
ERR4820602 HR-TB La1.2.BCG gb
ERR4820842 HR-TB La1.2.BCG gb
ERR4820965 HR-TB La1.2.BCG gb
ERR4821455 HR-TB La1.2.BCG gb
ERR4822011 HR-TB La1.2.BCG gb
ERR2512549 HR-TB La1.2.BCG gb
ERR2517166 HR-TB La1.2.BCG nl
ERR2517179 HR-TB La1.2.BCG nl
ERR2517495 HR-TB La1.2.BCG nl
ERR13285494 HR-TB La1.2.BCG None
ERR13285634 HR-TB La1.2.BCG None
ERR13285620 HR-TB La1.2.BCG None
ERR13291985 HR-TB La1.2.BCG None
ERR9125853 HR-TB La1.2.BCG None
ERR9811808 HR-TB La1.2.BCG None
SRR13180338 HR-TB La1.2.BCG None
SRR13180318 HR-TB La1.2.BCG None
SRR28868612 HR-TB La1.2.BCG None
SRR28868704 HR-TB La1.2.BCG None
SRR27450475 HR-TB La1.2.BCG None
SRR27450608 HR-TB La1.2.BCG None
SRR18911455 HR-TB La1.2.BCG None
SRR29053411 HR-TB La1.2.BCG None
SRR29053554 HR-TB La1.2.BCG None
SRR29055741 HR-TB La1.2.BCG None
SRR29440633 HR-TB La1.2.BCG None
ERR13285379 HR-TB La1.2.BCG None
ERR4818051 HR-TB La1.2.BCG None
SRR29906791 HR-TB La1.2.BCG None