Rv1979c - c.-8682_*13712del

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
0 Sensitive 0 RR-TB 55 HR-TB 2 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 20 Other
lineage Counts
lineage Count
La1.2.BCG 77
spoligotype Counts
spoligotype Count
None 77
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14801882 Other La1.2.BCG None
ERR766221 HR-TB La1.2.BCG None
SRR29052828 HR-TB La1.2.BCG None
SRR8886989 HR-TB La1.2.BCG None
SRR29053017 HR-TB La1.2.BCG None
ERR13264774 HR-TB La1.2.BCG None
ERR13291264 HR-TB La1.2.BCG None
SRR9596059 HR-TB La1.2.BCG None
SRR9596057 Other La1.2.BCG None
ERR766214 HR-TB La1.2.BCG None
SRR27450273 HR-TB La1.2.BCG None
SRR27450474 Other La1.2.BCG None
SRR16089543 Other La1.2.BCG None
ERR13292155 HR-TB La1.2.BCG None
SRR7070062 MDR-TB La1.2.BCG None
ERR4819451 HR-TB La1.2.BCG None
ERR11049331 HR-TB La1.2.BCG None
SRR13767788 HR-TB La1.2.BCG None
ERR766222 Other La1.2.BCG None
SRR27450271 Other La1.2.BCG None
SRR27450379 Other La1.2.BCG None
ERR11067503 HR-TB La1.2.BCG None
ERR11068110 HR-TB La1.2.BCG None
SRR17592374 HR-TB La1.2.BCG None
SRR29341496 HR-TB La1.2.BCG None
SRR17592378 Other La1.2.BCG None
SRR28868774 HR-TB La1.2.BCG None
ERR13291916 HR-TB La1.2.BCG None
ERR13285675 HR-TB La1.2.BCG None
ERR11044379 HR-TB La1.2.BCG None
SRR17592380 HR-TB La1.2.BCG None
SRR16089408 HR-TB La1.2.BCG None
ERR13285408 HR-TB La1.2.BCG None
ERR11049622 Other La1.2.BCG None
ERR2815602 Other La1.2.BCG None
ERR11049744 HR-TB La1.2.BCG None
SRR27450425 HR-TB La1.2.BCG None
SRR17592377 HR-TB La1.2.BCG None
SRR27450272 HR-TB La1.2.BCG None
SRR28868737 HR-TB La1.2.BCG None
SRR17592386 HR-TB La1.2.BCG None
SRR7068937 HR-TB La1.2.BCG None
SRR27450471 HR-TB La1.2.BCG None
SRR27450627 HR-TB La1.2.BCG None
SRR14782713 Other La1.2.BCG None
ERR11067380 Other La1.2.BCG None
SRR16089681 Other La1.2.BCG None
SRR7069775 HR-TB La1.2.BCG None
SRR7069799 HR-TB La1.2.BCG None
ERR11044175 Other La1.2.BCG None
ERR2815610 Other La1.2.BCG None
SRR28858627 HR-TB La1.2.BCG None
SRR7069945 HR-TB La1.2.BCG None
ERR13285622 HR-TB La1.2.BCG None
SRR29052999 HR-TB La1.2.BCG None
ERR9125888 Other La1.2.BCG None
SRR10997355 HR-TB La1.2.BCG None
SRR17592375 HR-TB La1.2.BCG None
SRR10997356 Other La1.2.BCG None
ERR5102809 HR-TB La1.2.BCG None
ERR551427 HR-TB La1.2.BCG None
SRR18897169 Other La1.2.BCG None
SRR9596061 HR-TB La1.2.BCG None
SRR27450170 HR-TB La1.2.BCG None
ERR400388 HR-TB La1.2.BCG None
SRR29055376 HR-TB La1.2.BCG None
SRR17592387 HR-TB La1.2.BCG None
ERR11049787 HR-TB La1.2.BCG None
SRR7070106 MDR-TB La1.2.BCG None
ERR11044748 HR-TB La1.2.BCG None
SRR14781838 HR-TB La1.2.BCG None
ERR11050679 HR-TB La1.2.BCG None
SRR17592382 HR-TB La1.2.BCG None
ERR11049990 Other La1.2.BCG None
SRR27450472 HR-TB La1.2.BCG None
ERR13285681 HR-TB La1.2.BCG None
SRR7070225 Other La1.2.BCG None