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SRA data
Rv1979c
- c.1052dupT
Drug resistance types
80 Sensitive
2 RR-TB
23 HR-TB
140 MDR-TB
24 Pre-XDR-TB
1 XDR-TB
95 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
351
lineage2.2.1;lineage4.3.3
5
lineage2.2.1;lineage4.2.1
3
lineage2.2.1;lineage4.9
2
lineage2.2.1;lineage4.2.1.1
1
lineage2.2.1;lineage4
1
lineage2.2.1;lineage4.3.2.1
1
lineage2.2.1;lineage4.1.2.1
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
365
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR019572
HR-TB
lineage2.2.1
ru
ERR067582
HR-TB
lineage2.2.1
ru
ERR1023403
MDR-TB
lineage2.2.1
None
ERR10762252
MDR-TB
lineage2.2.1
None
ERR10762284
MDR-TB
lineage2.2.1
None
ERR11043169
MDR-TB
lineage2.2.1
None
ERR11043235
MDR-TB
lineage2.2.1
None
ERR11049137
MDR-TB
lineage2.2.1
None
ERR11049277
MDR-TB
lineage2.2.1
None
ERR11050423
Sensitive
lineage2.2.1
None
Showing 1 to 10 of 365 entries
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