Rv1979c - c.338dupT
Drug resistance types
34 Sensitive
0 RR-TB
4 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage2.2.2 | 3 |
| lineage4.3.2 | 2 |
| La1.3;lineage1.2.2.2 | 15 |
| lineage1.1.1.1 | 4 |
| lineage1.2.1 | 3 |
| lineage1.1.2 | 5 |
| lineage1.1.3.2 | 1 |
| lineage1.1.1 | 1 |
| 1 | |
| lineage2.2.1.1 | 2 |
| lineage3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.1 | 3 |
| lineage2.2.1;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21279356 | Sensitive | lineage2.2.1 | None | ERR4819264 | Sensitive | lineage2.2.2 | gb | SRR6389906 | Sensitive | lineage4.3.2 | gt | SRR28045102 | MDR-TB | La1.3;lineage1.2.2.2 | None | SRR21689917 | Sensitive | La1.3;lineage1.2.2.2 | None | ERR2503454 | Other | lineage1.1.1.1 | fi | SRR20969659 | Pre-XDR-TB | lineage2.2.1 | None | SRR14519827 | Sensitive | lineage1.2.1 | None | SRR1180458 | Sensitive | lineage1.1.2 | None | SAMN02599000 | Sensitive | lineage1.1.2 | in | SRR12882465 | Sensitive | lineage1.1.3.2 | None | SRR14519744 | Sensitive | lineage1.2.1 | None | SRR28045125 | Sensitive | La1.3;lineage1.2.2.2 | None | SRR28389822 | Sensitive | lineage4.3.2 | None | SRR28045119 | HR-TB | La1.3;lineage1.2.2.2 | None | ERR2512822 | Sensitive | La1.3;lineage1.2.2.2 | gb | SRR26399417 | Sensitive | lineage1.1.1.1 | None | SRR21732881 | Sensitive | lineage1.1.1 | None | SRR6045495 | Sensitive | La1.3;lineage1.2.2.2 | gb | ERR4819660 | Sensitive | None | ERR9119341 | Sensitive | lineage1.1.1.1 | None | SRR1169535 | Sensitive | lineage1.1.2 | None | ERR751933 | Sensitive | lineage2.2.2 | th | SRR6936661 | Other | lineage2.2.1 | None | ERR13260067 | MDR-TB | lineage2.2.1.1 | None | SRR25340859 | MDR-TB | La1.3;lineage1.2.2.2 | None | ERR4799512 | Sensitive | La1.3;lineage1.2.2.2 | in | ERR2509885 | Other | lineage3 | None | SRR14519129 | Sensitive | lineage2.2.1.1 | None | SRR21277445 | Sensitive | lineage2.2.2 | None | ERR4830341 | Sensitive | lineage1.1.1.1 | vn | SRR14520010 | Sensitive | lineage1.2.1 | None | ERR4818152 | Sensitive | La1.3;lineage1.2.2.2 | None | ERR4815172 | Other | La1.3;lineage1.2.2.2 | None | ERR4798228 | Sensitive | La1.3;lineage1.2.2.2 | in | ERR4829956 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR21690002 | Sensitive | lineage2.1 | None | SRR11715717 | Sensitive | lineage2.1 | None | SRR25340828 | HR-TB | La1.3;lineage1.2.2.2 | None | ERR4799326 | Sensitive | La1.3;lineage1.2.2.2 | None | SRR25207061 | MDR-TB | lineage2.2.1;lineage4.2 | None | SRR21279436 | Sensitive | lineage2.2.1 | None | SRR7654033 | MDR-TB | lineage2.2.1 | None | ERR4814645 | HR-TB | lineage4.1.2.1 | gb | SRR1180282 | Sensitive | lineage1.1.2 | None | ERR13285587 | Sensitive | La1.3;lineage1.2.2.2 | None | ERR2514865 | Sensitive | La1.3;lineage1.2.2.2 | gb | SRR3724666 | HR-TB | lineage2.1 | None | SRR1172341 | Sensitive | lineage1.1.2 | None |
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