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SRA data
Rv2043c
- c.388_396delGTGGTCGGT
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
7 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.1.3.1
5
lineage2.2.1
5
lineage2.2.1.2
2
lineage4.1.2.1
1
Showing 1 to 4 of 4 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
13
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR2514666
Pre-XDR-TB
lineage4.1.1.3.1
gb
ERR2516831
Pre-XDR-TB
lineage4.1.1.3.1
gb
ERR270682
Pre-XDR-TB
lineage4.1.1.3.1
None
ERR387052
Pre-XDR-TB
lineage4.1.1.3.1
None
ERR4831789
MDR-TB
lineage2.2.1
vn
ERR4831811
MDR-TB
lineage2.2.1
vn
ERR4831821
MDR-TB
lineage2.2.1
vn
SRR2099972
Pre-XDR-TB
lineage4.1.1.3.1
None
SRR21576644
MDR-TB
lineage2.2.1
None
SRR28859651
MDR-TB
lineage2.2.1.2
None
Showing 1 to 10 of 13 entries
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