Rv2043c - c.449dupG
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
67 MDR-TB
37 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 2 |
| lineage2.2.1 | 100 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 2 |
| lineage4.6.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29231839 | MDR-TB | lineage4.1.2 | None | ERR8665531 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715359 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR18714990 | Pre-XDR-TB | lineage2.2.1 | None | SRR23691418 | MDR-TB | lineage2.2.1 | None | SRR5152912 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864600 | MDR-TB | lineage2.2.1 | None | SRR18715402 | MDR-TB | lineage2.2.1 | None | ERR5866038 | MDR-TB | lineage2.2.1 | None | ERR5866124 | MDR-TB | lineage2.2.1 | None | ERR5865186 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232736 | Pre-XDR-TB | lineage2.2.1 | None | SRR28240101 | MDR-TB | lineage2.2.1 | None | ERR13276201 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665807 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153264 | MDR-TB | lineage2.2.1 | None | ERR5864391 | MDR-TB | lineage2.2.1 | None | ERR5865401 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707055 | MDR-TB | lineage4.1.2 | cd | ERR5865887 | MDR-TB | lineage2.2.1 | None | ERR5864389 | MDR-TB | lineage2.2.1 | None | ERR5864603 | HR-TB | lineage2.2.1 | None | ERR5866521 | MDR-TB | lineage2.2.1 | None | SRR28240102 | MDR-TB | lineage2.2.1 | None | ERR5865518 | MDR-TB | lineage2.2.1 | None | SRR13232584 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865383 | MDR-TB | lineage2.2.1 | None | ERR5865386 | MDR-TB | lineage2.2.1 | None | ERR5864590 | MDR-TB | lineage2.2.1 | None | SRR28240100 | MDR-TB | lineage2.2.1 | None | ERR5864592 | MDR-TB | lineage2.2.1 | None | ERR5864387 | MDR-TB | lineage2.2.1 | None | ERR5864602 | MDR-TB | lineage2.2.1 | None | SRR28240234 | MDR-TB | lineage2.2.1 | None | ERR5864384 | MDR-TB | lineage2.2.1 | None | ERR5866122 | MDR-TB | lineage2.2.1 | None | ERR5865385 | MDR-TB | lineage2.2.1 | None | ERR5865578 | MDR-TB | lineage2.2.1 | None | ERR8665532 | Pre-XDR-TB | lineage2.2.1 | None | ERR9634268 | HR-TB | lineage2.2.1.1 | None | ERR5865400 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866123 | MDR-TB | lineage2.2.1 | None | ERR5864598 | MDR-TB | lineage2.2.1 | None | ERR5864386 | MDR-TB | lineage2.2.1 | None | ERR8665969 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822337 | Pre-XDR-TB | lineage2.2.1 | de | ERR8665727 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665968 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865397 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866522 | MDR-TB | lineage2.2.1 | None | SRR11662655 | MDR-TB | lineage2.2.1 | None | ERR5865384 | MDR-TB | lineage2.2.1 | None | ERR5865398 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458411 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397098 | MDR-TB | lineage2.2.1 | None | SRR10397228 | MDR-TB | lineage2.2.1 | None | ERR4553444 | MDR-TB | lineage4.8 | None | SRR18715385 | MDR-TB | lineage2.2.1 | None | ERR11044133 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232578 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864385 | MDR-TB | lineage2.2.1 | None | ERR5865187 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865399 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864382 | MDR-TB | lineage2.2.1 | None | SRR29093709 | MDR-TB | lineage4.6.1 | None | SRR11662240 | MDR-TB | lineage2.2.1 | None | SRR29017664 | MDR-TB | lineage4.8 | None | ERR5864605 | MDR-TB | lineage2.2.1 | None | ERR5864595 | MDR-TB | lineage2.2.1 | None | ERR5864596 | MDR-TB | lineage2.2.1 | None | SRR28239449 | MDR-TB | lineage2.2.1 | None | ERR5864381 | MDR-TB | lineage2.2.1 | None | ERR5865863 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864383 | MDR-TB | lineage2.2.1 | None | ERR5864594 | MDR-TB | lineage2.2.1 | None | ERR5865184 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232576 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861900 | MDR-TB | lineage2.2.1 | None | ERR5865579 | MDR-TB | lineage2.2.1 | None | ERR5865864 | Pre-XDR-TB | lineage2.2.1 | None | SRR23862043 | MDR-TB | lineage2.2.1 | None | ERR5864599 | MDR-TB | lineage2.2.1 | None | ERR5865188 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864597 | MDR-TB | lineage2.2.1 | None | ERR5864601 | MDR-TB | lineage2.2.1 | None | ERR5865185 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911720 | MDR-TB | lineage2.2.1 | us | ERR502894 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101524 | Other | lineage2.2.1 | None | SRR5266542 | Pre-XDR-TB | lineage2.2.1 | ru | SRR16370521 | Pre-XDR-TB | lineage2.2.1 | None | SRR28240104 | MDR-TB | lineage2.2.1 | None | ERR5864593 | MDR-TB | lineage2.2.1 | None | ERR5865745 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088167 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864591 | MDR-TB | lineage2.2.1 | None | SRR16087951 | MDR-TB | lineage2.2.1 | None | ERR5866037 | MDR-TB | lineage2.2.1 | None | ERR5866561 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665726 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864390 | MDR-TB | lineage2.2.1 | None | SRR13232716 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864388 | MDR-TB | lineage2.2.1 | None | ERR5865519 | MDR-TB | lineage2.2.1 | None | SRR6832465 | MDR-TB | lineage2.2.1 | None | ERR5864604 | MDR-TB | lineage2.2.1 | None | ERR5866562 | Pre-XDR-TB | lineage2.2.1 | None |
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