lineage | Count |
---|---|
lineage2.2.2 | 287 |
lineage2.2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage2.2.2;lineage2.2.1.1 | 1 |
lineage4.3.2.1;lineage2.2.2 | 2 |
lineage4.1.1.3;lineage2.2.2 | 1 |
lineage2.2 | 1 |
lineage4.9;lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 295 |
ID | Drug resistance | Lineage | Country iso2 | ERR8975747 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809259 | Pre-XDR-TB | lineage2.2.2 | za | ERR4830564 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515996 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808886 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976072 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976028 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911668 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809262 | MDR-TB | lineage2.2.2 | za | ERR8975796 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515577 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911633 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975776 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403632 | MDR-TB | lineage2.2.2 | za | ERR2516063 | MDR-TB | lineage2.2.2 | za | ERR8976007 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808902 | Pre-XDR-TB | lineage2.2.2 | za | ERR4830568 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515740 | MDR-TB | lineage2.2.2 | za | ERR4809007 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403443 | MDR-TB | lineage2.2.2 | za | ERR4809337 | MDR-TB | lineage2.2.2 | za | ERR8975163 | Pre-XDR-TB | lineage2.2.2 | None | SRR671810 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8975824 | MDR-TB | lineage2.2.2 | None | SAMN02403477 | MDR-TB | lineage2.2.2 | za | ERR1873530 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403478 | MDR-TB | lineage2.2.2 | za | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR2516012 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975030 | XDR-TB | lineage2.2.2 | None | ERR8975679 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809077 | XDR-TB | lineage2.2.2 | za | ERR7911531 | MDR-TB | lineage2.2.2 | za | ERR1873493 | MDR-TB | lineage2.2.2 | za | ERR8975487 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975916 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975945 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403479 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809322 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976075 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917977 | MDR-TB | lineage2.2.2 | za | SAMN02403483 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911658 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976008 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809352 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975790 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975746 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035308 | MDR-TB | lineage4.3.4.2 | br | ERR1023510 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873526 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515933 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976051 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515965 | MDR-TB | lineage2.2.2 | za | SAMN02403486 | MDR-TB | lineage2.2.2 | za | ERR4808885 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403465 | MDR-TB | lineage2.2.2 | za | SAMN02586031 | MDR-TB | lineage2.2.2 | za | ERR8975736 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976029 | MDR-TB | lineage2.2.2 | None | SAMN02403460 | MDR-TB | lineage2.2.2 | za | SAMN02403490 | Pre-XDR-TB | lineage2.2.2 | za | ERR8686597 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976088 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911588 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975006 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873489 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403471 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403459 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975745 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975800 | XDR-TB | lineage2.2.2 | None | ERR5918003 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808924 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976094 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403457 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976056 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976052 | MDR-TB | lineage2.2.2 | None | SAMN02586086 | MDR-TB | lineage2.2.2 | za | ERR4808918 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808866 | XDR-TB | lineage2.2.2 | za | ERR4809054 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809258 | MDR-TB | lineage2.2.2 | za | ERR8975480 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808896 | Pre-XDR-TB | lineage2.2.2 | za | ERR1035024 | MDR-TB | lineage2.2.2 | za | ERR7911559 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403484 | MDR-TB | lineage2.2.2 | za | SAMN02403455 | MDR-TB | lineage2.2.2 | za | ERR4809326 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911631 | Pre-XDR-TB | lineage2.2.2 | za | ERR1034986 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808914 | MDR-TB | lineage2.2.2 | za | ERR7911656 | MDR-TB | lineage2.2.2 | za | ERR8976061 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403445 | MDR-TB | lineage2.2.2 | za | ERR1873516 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809026 | MDR-TB | lineage2.2.2 | za | ERR8975940 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808892 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911570 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975792 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975999 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808910 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515867 | Pre-XDR-TB | lineage2.2.2 | za | ERR5918158 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976000 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975891 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975919 | MDR-TB | lineage2.2.2 | None | SAMN02403454 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873528 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515609 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808903 | XDR-TB | lineage2.2.2 | za | SAMN02403493 | MDR-TB | lineage2.2.2 | za | ERR8976071 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976064 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873467 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911632 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975918 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873472 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515658 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516055 | MDR-TB | lineage2.2.2 | za | ERR8975520 | XDR-TB | lineage2.2.2 | None | ERR8975813 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976004 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975673 | Pre-XDR-TB | lineage2.2.2;lineage2.2.1.1 | None | ERR1873485 | Pre-XDR-TB | lineage2.2.2 | za | SRR847799_SRR924229 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976032 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873440 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809017 | MDR-TB | lineage2.2.2 | za | ERR8976010 | MDR-TB | lineage2.2.2 | None | SAMN02403462 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403636 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02586072 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403442 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403451 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515227 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873443 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403485 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403463 | MDR-TB | lineage2.2.2 | za | ERR4808984 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403631 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808897 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911646 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809269 | MDR-TB | lineage2.2.2 | za | ERR8975020 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873456 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917995 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917997 | XDR-TB | lineage2.2.2 | za | ERR8975980 | MDR-TB | lineage2.2.2 | None | ERR8976050 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975889 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976011 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975743 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976074 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911572 | Pre-XDR-TB | lineage2.2.2 | za | ERR5918121 | XDR-TB | lineage2.2.2 | za | SAMN02403492 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873452 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809008 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873519 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02053795 | MDR-TB | lineage2.2.2 | za | SRR847799 | Pre-XDR-TB | lineage2.2.2 | za | ERR5918104 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975744 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808889 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403628 | MDR-TB | lineage2.2.2 | za | SAMN02403450 | MDR-TB | lineage2.2.2 | za | SRR2101344 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975866 | MDR-TB | lineage2.2.2 | None | ERR1023530 | MDR-TB | lineage2.2.2 | None | ERR1023524 | MDR-TB | lineage2.2.2 | None | ERR8975997 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911622 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873502 | MDR-TB | lineage2.2.2 | za | SAMN02403474 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976025 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808887 | MDR-TB | lineage2.2.2 | za | ERR8700386 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515735 | MDR-TB | lineage2.2.2 | za | ERR1873439 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917983 | MDR-TB | lineage2.2.2 | za | ERR8975769 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403453 | MDR-TB | lineage2.2.2 | za | ERR7911679 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809163 | Pre-XDR-TB | lineage2.2.2 | za | ERR8686165 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976037 | MDR-TB | lineage2.2.2 | None | ERR4808978 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873453 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515419 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515331 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403633 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403487 | MDR-TB | lineage2.2.2 | za | ERR1873544 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809281 | MDR-TB | lineage2.2.2 | za | ERR4808856 | XDR-TB | lineage2.2.2 | za | ERR8976030 | MDR-TB | lineage2.2.2 | None | ERR4809330 | Pre-XDR-TB | lineage2.2.2 | za | ERR4830556 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976026 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976035 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975687 | Pre-XDR-TB | lineage4.3.2.1;lineage2.2.2 | None | ERR8975053 | MDR-TB | lineage2.2.2 | None | ERR4808864 | Pre-XDR-TB | lineage2.2.2 | za | ERR8686156 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035042 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02586067 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873500 | MDR-TB | lineage2.2.2 | za | ERR7911642 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515213 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515898 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911688 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403470 | MDR-TB | lineage2.2.2 | za | ERR4809357 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976005 | MDR-TB | lineage2.2.2 | None | ERR1873524 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911659 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976034 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873551 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515473 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911564 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873515 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808997 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808983 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911651 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808895 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516064 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403472 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976049 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911576 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808904 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975949 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873473 | MDR-TB | lineage2.2.2 | za | SAMN02403456 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403475 | MDR-TB | lineage2.2.2 | za | SAMN02403444 | MDR-TB | lineage2.2.2 | za | ERR8975998 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515839 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976057 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976006 | MDR-TB | lineage2.2.2 | None | ERR4808890 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403458 | MDR-TB | lineage2.2.2 | za | ERR8975664 | Pre-XDR-TB | lineage4.3.2.1;lineage2.2.2 | None | ERR5918000 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515541 | XDR-TB | lineage2.2.2 | za | ERR7911604 | Pre-XDR-TB | lineage2.2.2 | za | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976002 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975899 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515584 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809320 | XDR-TB | lineage2.2.2 | za | SAMN02403491 | MDR-TB | lineage2.2.2 | za | ERR7911636 | Pre-XDR-TB | lineage4.1.1.3;lineage2.2.2 | za | ERR8975767 | XDR-TB | lineage2.2.2 | None | ERR8975517 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR4808857 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911661 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975996 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403464 | MDR-TB | lineage2.2.2 | za | ERR4809079 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873564 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809072 | MDR-TB | lineage2.2.2 | za | ERR4809075 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873548 | MDR-TB | lineage2.2.2 | za | ERR8976060 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976084 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911575 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911654 | Pre-XDR-TB | lineage2.2.2 | za | ERR5918011 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873454 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975678 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975789 | XDR-TB | lineage4.9;lineage2.2.2 | None | SAMN02403482 | MDR-TB | lineage2.2.2 | za | ERR4809319 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515833 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911529 | MDR-TB | lineage2.2.2 | za | ERR5918117 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975848 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808901 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976014 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911600 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403461 | Pre-XDR-TB | lineage2.2.2 | za | ERR8976085 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976031 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976115 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403452 | MDR-TB | lineage2.2.2 | za | ERR8975847 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911605 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873539 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403476 | MDR-TB | lineage2.2.2 | za | ERR4830567 | Pre-XDR-TB | lineage2.2.2 | None |
---|