Rv2043c - p.Ala171Glu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
8 HR-TB
73 MDR-TB
31 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 53 |
| lineage2.2.1 | 46 |
| lineage4.3.3 | 4 |
| lineage4.3.3;lineage4.3.4.2 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1;lineage4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9224944 | MDR-TB | lineage4.3.4.2 | None | SRR29051590 | MDR-TB | lineage4.3.4.2 | None | ERR13284359 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120017 | MDR-TB | lineage2.2.1 | None | SRR5073505 | HR-TB | lineage2.2.1 | vn | SRR5073723 | HR-TB | lineage2.2.1 | vn | SRR10379985 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043526 | MDR-TB | lineage2.2.1 | None | SRR13583368 | MDR-TB | lineage4.3.4.2 | None | SRR13583350 | MDR-TB | lineage4.3.4.2 | None | ERR5987206 | MDR-TB | lineage2.2.1 | None | ERR13284376 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987448 | MDR-TB | lineage2.2.1 | None | ERR4800165 | Pre-XDR-TB | lineage4.3.3 | None | SRR29051348 | MDR-TB | lineage4.3.4.2 | None | SRR29051339 | MDR-TB | lineage4.3.4.2 | None | SRR29051297 | MDR-TB | lineage4.3.4.2 | None | SRR29051267 | MDR-TB | lineage4.3.4.2 | None | SRR29050644 | MDR-TB | lineage4.3.4.2 | None | SRR13583488 | MDR-TB | lineage4.3.4.2 | None | SRR29050889 | MDR-TB | lineage4.3.4.2 | None | SRR29050908 | MDR-TB | lineage4.3.4.2 | None | SRR29051520 | MDR-TB | lineage4.3.4.2 | None | ERR9120016 | MDR-TB | lineage2.2.1 | None | SRR29050882 | MDR-TB | lineage4.3.4.2 | None | SRR9224978 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR9224931 | MDR-TB | lineage4.3.4.2 | None | SRR29050684 | MDR-TB | lineage4.3.4.2 | None | SRR29050664 | MDR-TB | lineage4.3.4.2 | None | SRR29051234 | MDR-TB | lineage4.3.4.2 | None | SRR23691363 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600553 | MDR-TB | lineage2.2.1 | None | SRR9224961 | MDR-TB | lineage4.3.4.2 | None | SRR13583396 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | SAMN02584620 | Pre-XDR-TB | lineage2.2.1 | md | ERR2653086 | MDR-TB | lineage4.3.3 | None | ERR7911161 | MDR-TB | lineage2.2.1.1 | vn | ERR4829863 | MDR-TB | lineage4.4.1.2 | it | ERR4830214 | HR-TB | lineage2.2.1 | vn | ERR7911474 | MDR-TB | lineage2.2.1 | vn | ERR11081338 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645821 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051540 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR13583418 | MDR-TB | lineage4.3.4.2 | None | SRR1169146 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399710 | HR-TB | lineage2.2.1 | None | SRR9224934 | MDR-TB | lineage4.3.4.2 | None | ERR7737681 | MDR-TB | lineage2.2.1 | None | SRR28351609 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653110 | MDR-TB | lineage4.3.3 | None | SRR7755753 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050830 | MDR-TB | lineage2.2.1 | None | SRR29051273 | MDR-TB | lineage4.3.4.2 | None | SRR29051013 | MDR-TB | lineage4.3.4.2 | None | SRR7755662 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051597 | MDR-TB | lineage4.3.4.2 | None | SRR29051567 | MDR-TB | lineage4.3.4.2 | None | SRR1166097 | Pre-XDR-TB | lineage2.2.1 | None | SRR9224982 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13266225 | MDR-TB | lineage2.2.1;lineage4.1.2 | None | SRR29096627 | RR-TB | lineage4.3.4.1 | None | SRR29050864 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | SRR9224976 | MDR-TB | lineage4.3.4.2 | None | ERR13285133 | MDR-TB | lineage2.2.1 | None | SRR14807492 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583393 | MDR-TB | lineage4.3.4.2 | None | SRR9225004 | MDR-TB | lineage4.3.4.2 | None | SRR29051298 | MDR-TB | lineage4.3.4.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088338 | MDR-TB | lineage2.2.1 | None | SRR28393992 | MDR-TB | lineage4.3.3 | None | SRR26400043 | MDR-TB | lineage2.2.1.1 | None | SRR13583409 | MDR-TB | lineage4.3.4.2 | None | SRR14801986 | HR-TB | lineage2.2.1 | None | SRR9224991 | MDR-TB | lineage4.3.4.2 | None | SRR29914414 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583383 | MDR-TB | lineage4.3.4.2 | None | SRR9224926 | MDR-TB | lineage4.3.4.2 | None | ERR11082857 | MDR-TB | lineage2.2.1;lineage4.3.4.1 | None | SRR5153856 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069426 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828687 | MDR-TB | lineage2.2.1 | None | ERR553196 | Pre-XDR-TB | lineage2.2.1 | de | ERR2517070 | Pre-XDR-TB | lineage2.2.1 | gb | SRR26937038 | MDR-TB | lineage2.2.1 | None | SRR26399579 | HR-TB | lineage2.2.1 | None | SRR29050701 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28351381 | Pre-XDR-TB | lineage2.2.1 | None | SRR9224979 | MDR-TB | lineage4.3.4.2 | None | SRR29050646 | MDR-TB | lineage4.3.4.2 | None | SRR29050706 | MDR-TB | lineage4.3.4.2 | None | SRR29051275 | MDR-TB | lineage4.3.4.2 | None | ERR192451 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051349 | MDR-TB | lineage4.3.4.2 | None | SRR13583476 | MDR-TB | lineage4.3.4.2 | None | SRR29050647 | MDR-TB | lineage4.3.4.2 | None | SRR9224909 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29051366 | MDR-TB | lineage4.3.4.2 | None | SRR13583372 | MDR-TB | lineage4.3.4.2 | None | SRR29050861 | MDR-TB | lineage4.3.4.2 | None | SRR9224925 | MDR-TB | lineage4.3.4.2 | None | SRR29051296 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29051033 | MDR-TB | lineage4.3.4.2 | None | ERR9119362 | HR-TB | lineage2.2.1 | None | ERR11798593 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051559 | MDR-TB | lineage4.3.4.2 | None | SRR29051491 | MDR-TB | lineage4.3.4.2 | None | SRR16370280 | MDR-TB | lineage2.2.1.1 | None | SRR26937131 | MDR-TB | lineage2.2.1.1 | None | SRR20632810 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782277 | HR-TB | lineage2.2.1 | None | ERR4828702 | MDR-TB | lineage2.2.1 | vn | ERR7362025 | Pre-XDR-TB | lineage2.2.1 | None |
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