lineage | Count |
---|---|
lineage4.6.2.2 | 1 |
lineage2.2.1 | 15 |
lineage1.2.2.2 | 9 |
lineage3 | 4 |
lineage4.8 | 6 |
lineage4.3.1 | 1 |
lineage4.1.1.3 | 2 |
lineage4.3.3 | 1 |
1 | |
lineage2.2.1.1 | 1 |
lineage4.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | ERR9119539 | MDR-TB | lineage4.6.2.2 | None | ERR5865695 | MDR-TB | lineage2.2.1 | None | ERR4553789 | RR-TB | lineage1.2.2.2 | None | ERR4813292 | MDR-TB | lineage2.2.1 | pe | ERR2510573 | MDR-TB | lineage3 | pk | ERR4829005 | Pre-XDR-TB | lineage4.8 | None | SRR9738484 | MDR-TB | lineage4.8 | None | SRR27107243 | MDR-TB | lineage4.3.1 | None | ERR751470 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR5153074 | MDR-TB | lineage2.2.1 | None | ERR2307641 | MDR-TB | lineage2.2.1 | None | SRR29017606 | MDR-TB | lineage1.2.2.2 | None | ERR987761 | MDR-TB | lineage4.3.3 | None | SRR7592347 | Pre-XDR-TB | lineage4.8 | None | ERR4553792 | RR-TB | lineage1.2.2.2 | None | ERR13260424 | MDR-TB | lineage2.2.1 | None | SRR29273805 | MDR-TB | lineage4.8 | None | SRR29016885 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4553582 | RR-TB | lineage1.2.2.2 | None | SRR29017060 | XDR-TB | lineage1.2.2.2 | None | ERR2510415 | MDR-TB | lineage3 | pk | ERR2510705 | Pre-XDR-TB | lineage4.8 | it | SRR29017651 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR29385290 | MDR-TB | lineage2.2.1 | None | SRR6785168 | MDR-TB | lineage2.2.1 | None | ERR4553577 | RR-TB | lineage1.2.2.2 | None | ERR4553882 | RR-TB | None | SRR21277556 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11775769 | MDR-TB | lineage2.2.1 | None | SRR9971319 | MDR-TB | lineage4.1.2 | None | ERR4828900 | MDR-TB | lineage4.1.2.1 | None | ERR4831973 | MDR-TB | lineage2.2.1 | vn | ERR2653170 | MDR-TB | lineage4.3.4.2 | None | SRR8369839 | MDR-TB | lineage2.2.1 | None | ERR4813727 | MDR-TB | lineage2.2.1 | None | SRR4423177 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR6397947 | MDR-TB | lineage2.2.1 | ca | ERR5865696 | MDR-TB | lineage2.2.1 | None | ERR2510581 | MDR-TB | lineage3 | pk | SRR28646093 | MDR-TB | lineage4.8 | None | SRR28393712 | MDR-TB | lineage2.2.1 | None | ERR2510582 | MDR-TB | lineage3 | pk | ERR13260100 | MDR-TB | lineage2.2.1 | None | ERR4813213 | Pre-XDR-TB | lineage4.1.1.3 | pe |
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