lineage | Count |
---|---|
lineage2.2.1 | 36 |
lineage2.2.1.1 | 5 |
lineage4.3.1 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 2 |
lineage4.1.2 | 1 |
lineage1.1.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.6.1.2 | 2 |
lineage4.3.4.1 | 1 |
lineage4.3.3 | 1 |
lineage4.2.1.1 | 1 |
lineage4.2.1 | 1 |
lineage4 | 1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | SRR10305617 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156232 | MDR-TB | lineage2.2.1 | None | SRR10869230 | MDR-TB | lineage2.2.1 | None | SRR13232659 | Pre-XDR-TB | lineage2.2.1 | None | SRR15661586 | MDR-TB | lineage2.2.1.1 | None | SRR10305615 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869240 | MDR-TB | lineage2.2.1 | None | SRR13180331 | Pre-XDR-TB | lineage4.3.1 | None | SRR16088436 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156274 | MDR-TB | lineage2.2.1 | None | SRR18002900 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723846 | Pre-XDR-TB | lineage2.2.1 | cn | ERR158606 | MDR-TB | lineage2.2.1 | gb | SRR21576614 | MDR-TB | lineage4.5 | None | ERR11081307 | MDR-TB | lineage4.1.2.1 | None | SRR1723847 | Pre-XDR-TB | lineage2.2.1 | cn | SRR4035702 | RR-TB | lineage4.1.2 | None | ERR1952141 | Pre-XDR-TB | lineage2.2.1 | ie | SRR5073698 | MDR-TB | lineage2.2.1.1 | vn | ERR2517112 | Pre-XDR-TB | lineage2.2.1 | gb | SRR1723843 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR2517033 | MDR-TB | lineage2.2.1 | gb | ERR2516769 | MDR-TB | lineage2.2.1 | gb | ERR2516775 | MDR-TB | lineage2.2.1 | gb | ERR2653199 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4828710 | MDR-TB | lineage2.2.1 | None | ERR2706921 | MDR-TB | lineage4.6.1.2 | cd | ERR2707010 | MDR-TB | lineage4.3.4.1 | cd | ERR4827778 | MDR-TB | lineage2.2.1 | None | SAMN03246565 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4829736 | MDR-TB | lineage4.3.3 | it | ERR4831784 | MDR-TB | lineage2.2.1.1 | vn | SRR6832548 | MDR-TB | lineage4.2.1.1 | None | ERR4831777 | MDR-TB | lineage2.2.1.1 | vn | ERR4831794 | MDR-TB | lineage2.2.1.1 | None | SRR6824527 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824471 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824580 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824530 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8422493 | MDR-TB | lineage2.2.1 | None | ERR5864553 | MDR-TB | lineage2.2.1 | None | ERR11049398 | Other | lineage4.2.1 | None | ERR4811872 | HR-TB | lineage4 | pe | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811891 | Other | lineage4.1.2.1 | None | ERR5864551 | MDR-TB | lineage2.2.1 | None | ERR5864554 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866118 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864555 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864552 | MDR-TB | lineage2.2.1 | None | ERR5864557 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866117 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358711 | MDR-TB | lineage4.6.1.2 | None | ERR7362006 | Pre-XDR-TB | lineage2.2.1 | None |
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