lineage | Count |
---|---|
lineage4.1.1.1 | 17 |
lineage2.2.1 | 37 |
lineage2.2.1.1 | 4 |
lineage3 | 1 |
lineage2.2.2 | 8 |
lineage2.2.1.2 | 11 |
lineage3.1.1 | 1 |
lineage4.2.2.2 | 4 |
lineage4.8 | 1 |
lineage4.2.2.1 | 1 |
lineage4.3.3 | 2 |
lineage3.1.2.1 | 1 |
lineage6 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | ERR4276862 | MDR-TB | lineage4.1.1.1 | None | SRR671869 | MDR-TB | lineage2.2.1 | cn | ERR1023516 | MDR-TB | lineage2.2.1.1 | None | ERR5865366 | MDR-TB | lineage2.2.1 | None | ERR10748533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11044017 | MDR-TB | lineage4.1.1.1 | None | ERR2517041 | MDR-TB | lineage3 | gb | SRR25207233 | MDR-TB | lineage2.2.2 | None | ERR4810576 | MDR-TB | lineage2.2.2 | cn | SAMN02414939 | MDR-TB | lineage4.1.1.1 | se | ERR4276904 | MDR-TB | lineage4.1.1.1 | None | ERR2516917 | MDR-TB | lineage2.2.1.2 | gb | ERR5865369 | MDR-TB | lineage2.2.1 | None | ERR4815303 | MDR-TB | lineage3.1.1 | gb | ERR2516209 | MDR-TB | lineage2.2.1 | be | SRR15506904 | MDR-TB | lineage2.2.1.2 | None | ERR4829092 | MDR-TB | lineage4.2.2.2 | dj | ERR4800718 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR7657759 | MDR-TB | lineage2.2.1 | None | SRR29681372 | MDR-TB | lineage2.2.1 | None | ERR4829096 | MDR-TB | lineage4.2.2.2 | dj | ERR4810482 | Pre-XDR-TB | lineage2.2.2 | cn | ERR5865367 | MDR-TB | lineage2.2.1 | None | SRR6356935 | MDR-TB | lineage2.2.1 | None | SRR22536492 | MDR-TB | lineage4.8 | None | ERR11044028 | MDR-TB | lineage4.1.1.1 | None | ERR11044375 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517097 | MDR-TB | lineage2.2.1.2 | gb | SRR25207263 | Pre-XDR-TB | lineage2.2.2 | None | ERR11798532 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR1023501 | MDR-TB | lineage2.2.1.1 | None | SRR15465770 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR25515377 | MDR-TB | lineage2.2.1 | None | SRR6356991 | MDR-TB | lineage2.2.1 | None | SRR27069405 | MDR-TB | lineage2.2.1 | None | SRR21576638 | MDR-TB | lineage2.2.1 | None | SRR5153273 | MDR-TB | lineage2.2.1 | None | SRR1165557 | MDR-TB | lineage4.1.1.1 | None | SRR16149124 | MDR-TB | lineage4.2.2.1 | None | SRR10380021 | Pre-XDR-TB | lineage2.2.1 | None | ERR7764346 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR17406771 | MDR-TB | lineage2.2.1.2 | None | SRR16156748 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865368 | MDR-TB | lineage2.2.1 | None | SRR29539212 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539408 | Pre-XDR-TB | lineage2.2.1 | None | SRR29914419 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393605 | MDR-TB | lineage4.1.1.1 | None | ERR4822308 | MDR-TB | lineage4.1.1.1 | de | ERR4810983 | MDR-TB | lineage2.2.2 | cn | ERR1023442 | MDR-TB | lineage2.2.1.1 | None | SRR29385438 | MDR-TB | lineage2.2.1 | None | SRR671796 | Pre-XDR-TB | lineage2.2.1 | cn | SRR23252659 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR29538881 | MDR-TB | lineage4.3.3 | None | ERR4797168 | Pre-XDR-TB | lineage3.1.2.1 | in | ERR13276135 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645825 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082316 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665730 | MDR-TB | lineage2.2.1 | None | SRR5818579 | MDR-TB | lineage4.1.1.1 | dj | ERR4810930 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4829012 | Pre-XDR-TB | lineage2.2.1 | None | SRR2328057 | Pre-XDR-TB | lineage2.2.1 | au | ERR6397200 | MDR-TB | lineage4.2.2.2 | None | SRR25207112 | MDR-TB | lineage2.2.2 | None | SRR24256197 | MDR-TB | lineage4.3.3 | None | ERR8665731 | MDR-TB | lineage2.2.1 | None | SRR3743384 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165525 | MDR-TB | lineage4.1.1.1 | None | ERR8665997 | Pre-XDR-TB | lineage2.2.1 | None | SRR15506890 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1162886 | MDR-TB | lineage4.1.1.1 | None | SRR21277259 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818583 | MDR-TB | lineage4.1.1.1 | dj | ERR2516935 | MDR-TB | lineage2.2.1.2 | gb | ERR2653219 | MDR-TB | lineage4.1.1.1 | None | ERR13290523 | MDR-TB | lineage4.1.1.1 | None | ERR13290525 | MDR-TB | lineage4.1.1.1 | None | SRR29385425 | Pre-XDR-TB | lineage2.2.1 | None | ERR3806631 | MDR-TB | lineage6 | None | ERR4796633 | Pre-XDR-TB | lineage2.2.1 | in | SRR1166926 | MDR-TB | lineage4.1.1.1 | None | SRR15506901 | MDR-TB | lineage2.2.1.2 | None | SRR15465768 | MDR-TB | lineage2.2.1.2 | None | SRR28706542 | MDR-TB | lineage2.2.1 | None | SRR23340044 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822315 | MDR-TB | lineage4.1.1.1 | de |
---|