lineage | Count |
---|---|
lineage1.2.2.2 | 1 |
lineage4.3.3 | 40 |
lineage2.2.1 | 22 |
lineage4.1.1.3 | 1 |
lineage4.3.2 | 2 |
lineage4.3.2.1 | 1 |
lineage3 | 7 |
lineage4.3.3;lineage4.3.4.1 | 2 |
lineage4.2.1 | 2 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | SRR28351454 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28393844 | MDR-TB | lineage4.3.3 | None | SRR28351426 | MDR-TB | lineage2.2.1 | None | SRR28706691 | MDR-TB | lineage2.2.1 | None | ERR3287863 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR28393942 | Pre-XDR-TB | lineage4.3.2 | None | ERR8976095 | MDR-TB | lineage4.3.2.1 | None | ERR3287818 | MDR-TB | lineage4.3.3 | pe | SRR28393431 | MDR-TB | lineage4.3.3 | None | ERR4813342 | MDR-TB | lineage4.3.3 | pe | ERR2510153 | MDR-TB | lineage4.3.3 | pe | SRR28498719 | MDR-TB | lineage2.2.1 | None | ERR3335766 | Pre-XDR-TB | lineage3 | pk | SRR28393412 | MDR-TB | lineage4.3.3 | None | SRR23311064 | MDR-TB | lineage2.2.1 | None | ERR3287766 | MDR-TB | lineage4.3.3 | pe | ERR7910880 | MDR-TB | lineage4.3.3 | pe | ERR6879035 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | SRR29274040 | Pre-XDR-TB | lineage4.2.1 | None | SRR15316600 | RR-TB | lineage2.2.1 | None | ERR4829068 | MDR-TB | lineage2.2.1 | ng | ERR5917719 | MDR-TB | lineage4.2.1 | by | ERR2516404 | Pre-XDR-TB | lineage4.3.2 | pe | ERR4813007 | MDR-TB | lineage4.3.3 | None | ERR4812776 | MDR-TB | lineage4.3.3 | pe | ERR3287374 | MDR-TB | lineage4.3.3 | pe | SRR14781961 | MDR-TB | lineage2.2.1 | None | ERR13267471 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287749 | MDR-TB | lineage4.3.3 | pe | ERR4813563 | MDR-TB | lineage4.3.3 | None | ERR4829067 | MDR-TB | lineage2.2.1 | ng | ERR4827543 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510714 | Pre-XDR-TB | lineage2.2.1 | it | ERR1034750 | MDR-TB | lineage4.3.3 | pe | SRR28393460 | MDR-TB | lineage4.3.3 | None | SRR28393462 | MDR-TB | lineage4.3.3 | None | ERR2516438 | MDR-TB | lineage2.2.1 | nl | SRR18003040 | MDR-TB | lineage2.2.1 | None | SRR5341328 | Pre-XDR-TB | lineage3 | in | ERR7911376 | MDR-TB | lineage4.3.3 | pe | ERR4813019 | MDR-TB | lineage4.3.3 | None | SRR2100921 | MDR-TB | lineage3 | None | ERR2516940 | MDR-TB | lineage3 | gb | SRR28706662 | MDR-TB | lineage4.3.3 | None | ERR751543 | MDR-TB | lineage4.3.3 | pe | ERR4829065 | MDR-TB | lineage2.2.1 | ng | SRR13180253 | MDR-TB | lineage2.2.1 | None | ERR3287363 | Pre-XDR-TB | lineage4.3.3 | pe | ERR12117983 | MDR-TB | lineage4.3.3 | None | ERR3287786 | MDR-TB | lineage4.3.3 | pe | ERR4813731 | MDR-TB | lineage4.3.3 | None | ERR4810855 | MDR-TB | lineage2.2.1 | cn | ERR1034893 | MDR-TB | lineage2.2.1 | pt | ERR6879033 | MDR-TB | lineage4.3.3 | None | SRR16088566 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034748 | MDR-TB | lineage4.3.3 | pe | ERR270738 | MDR-TB | lineage3 | None | SRR24256104 | MDR-TB | lineage2.2.1 | None | ERR6879034 | MDR-TB | lineage4.3.3 | None | ERR12117934 | Pre-XDR-TB | lineage4.3.3 | None | SRR28393843 | MDR-TB | lineage4.3.3 | None | ERR751616 | MDR-TB | lineage4.3.3 | pe | SRR29539712 | MDR-TB | lineage2.2.1 | None | ERR386893 | MDR-TB | lineage3 | None | ERR6879047 | MDR-TB | lineage4.3.3 | None | SRR16370478 | MDR-TB | lineage4.3.3 | None | ERR278534 | MDR-TB | lineage3 | None | ERR13261618 | MDR-TB | lineage4.3.3 | None | ERR4829066 | MDR-TB | lineage2.2.1 | ng | ERR751416 | MDR-TB | lineage4.3.3 | pe | ERR1034798 | MDR-TB | lineage4.3.3 | pe | ERR751571 | MDR-TB | lineage4.3.3 | pe | ERR3287426 | MDR-TB | lineage4.3.3 | pe | ERR4813536 | MDR-TB | lineage4.3.3 | None | SRR28393429 | MDR-TB | lineage4.3.3 | None | ERR4827547 | MDR-TB | lineage2.2.1 | None | ERR1034757 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | pe | ERR775328 | MDR-TB | lineage4.3.3 | pe |
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