lineage | Count |
---|---|
lineage2.2.1 | 22 |
lineage4.3.3 | 42 |
lineage4.3.2 | 2 |
lineage4.2.1 | 2 |
lineage4.3.3;lineage4.3.4.1 | 2 |
lineage3 | 7 |
lineage2.2.2 | 1 |
lineage1.2.2.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 81 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR28351426 | MDR-TB | lineage2.2.1 | None |
SRR28393462 | MDR-TB | lineage4.3.3 | None |
ERR751571 | MDR-TB | lineage4.3.3 | pe |
SRR28706691 | MDR-TB | lineage2.2.1 | None |
ERR7910880 | MDR-TB | lineage4.3.3 | pe |
SRR28393942 | Pre-XDR-TB | lineage4.3.2 | None |
ERR751616 | MDR-TB | lineage4.3.3 | pe |
SRR18003040 | MDR-TB | lineage2.2.1 | None |
ERR2516438 | MDR-TB | lineage2.2.1 | nl |
ERR2510153 | MDR-TB | lineage4.3.3 | pe |
ERR4813342 | MDR-TB | lineage4.3.3 | pe |
ERR4812776 | MDR-TB | lineage4.3.3 | pe |
ERR3287749 | MDR-TB | lineage4.3.3 | pe |
ERR3287766 | MDR-TB | lineage4.3.3 | pe |
ERR3287786 | MDR-TB | lineage4.3.3 | pe |
ERR5917719 | MDR-TB | lineage4.2.1 | by |
ERR4810855 | MDR-TB | lineage2.2.1 | cn |
ERR4813019 | MDR-TB | lineage4.3.3 | None |
ERR6879035 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None |
SRR13180253 | MDR-TB | lineage2.2.1 | None |
ERR4829066 | MDR-TB | lineage2.2.1 | ng |
SRR29539712 | MDR-TB | lineage2.2.1 | None |
ERR4827547 | MDR-TB | lineage2.2.1 | None |
ERR13267471 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3335766 | Pre-XDR-TB | lineage3 | pk |
SRR29093950 | Pre-XDR-TB | lineage2.2.2 | None |
SRR28393843 | MDR-TB | lineage4.3.3 | None |
SRR28351454 | Pre-XDR-TB | lineage1.2.2.2 | None |
ERR751543 | MDR-TB | lineage4.3.3 | pe |
ERR751416 | MDR-TB | lineage4.3.3 | pe |
SRR28393431 | MDR-TB | lineage4.3.3 | None |
SRR2100921 | MDR-TB | lineage3 | None |
ERR2516940 | MDR-TB | lineage3 | gb |
ERR3287363 | Pre-XDR-TB | lineage4.3.3 | pe |
ERR3287374 | MDR-TB | lineage4.3.3 | pe |
ERR3287426 | MDR-TB | lineage4.3.3 | pe |
ERR3287818 | MDR-TB | lineage4.3.3 | pe |
ERR3287863 | Pre-XDR-TB | lineage4.1.1.3 | pe |
ERR4829065 | MDR-TB | lineage2.2.1 | ng |
ERR4829068 | MDR-TB | lineage2.2.1 | ng |
ERR4829067 | MDR-TB | lineage2.2.1 | ng |
ERR1034893 | MDR-TB | lineage2.2.1 | pt |
SRR28498719 | MDR-TB | lineage2.2.1 | None |
SRR16370478 | MDR-TB | lineage4.3.3 | None |
SRR28706662 | MDR-TB | lineage4.3.3 | None |
ERR278534 | MDR-TB | lineage3 | None |
ERR13261618 | MDR-TB | lineage4.3.3 | None |
ERR4813731 | MDR-TB | lineage4.3.3 | None |
ERR13260192 | MDR-TB | lineage4.3.3 | None |
ERR6879033 | MDR-TB | lineage4.3.3 | None |
ERR13261575 | MDR-TB | lineage4.3.3 | None |
SRR16088566 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4813563 | MDR-TB | lineage4.3.3 | None |
ERR4827543 | Pre-XDR-TB | lineage2.2.1 | None |
ERR6879034 | MDR-TB | lineage4.3.3 | None |
ERR12117934 | Pre-XDR-TB | lineage4.3.3 | None |
SRR28393460 | MDR-TB | lineage4.3.3 | None |
SRR28393844 | MDR-TB | lineage4.3.3 | None |
ERR775328 | MDR-TB | lineage4.3.3 | pe |
ERR7911376 | MDR-TB | lineage4.3.3 | pe |
ERR2516404 | Pre-XDR-TB | lineage4.3.2 | pe |
ERR8976095 | MDR-TB | lineage4.3.2.1 | None |
SRR5341328 | Pre-XDR-TB | lineage3 | in |
ERR1034748 | MDR-TB | lineage4.3.3 | pe |
ERR1034750 | MDR-TB | lineage4.3.3 | pe |
SRR28393412 | MDR-TB | lineage4.3.3 | None |
ERR1034798 | MDR-TB | lineage4.3.3 | pe |
SRR23311064 | MDR-TB | lineage2.2.1 | None |
ERR386893 | MDR-TB | lineage3 | None |
ERR6879047 | MDR-TB | lineage4.3.3 | None |
SRR15316600 | RR-TB | lineage2.2.1 | None |
SRR29274040 | Pre-XDR-TB | lineage4.2.1 | None |
ERR4813007 | MDR-TB | lineage4.3.3 | None |
ERR12117983 | MDR-TB | lineage4.3.3 | None |
ERR4813536 | MDR-TB | lineage4.3.3 | None |
SRR14781961 | MDR-TB | lineage2.2.1 | None |
SRR28393429 | MDR-TB | lineage4.3.3 | None |
ERR270738 | MDR-TB | lineage3 | None |
ERR1034757 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | pe |
SRR24256104 | MDR-TB | lineage2.2.1 | None |
ERR2510714 | Pre-XDR-TB | lineage2.2.1 | it |