lineage | Count |
---|---|
lineage2.2.1 | 13 |
lineage4.3.3 | 25 |
lineage2.2.1;lineage4.2.1 | 2 |
lineage4.2.1 | 9 |
lineage4.3.4.2.1 | 1 |
lineage4.8 | 3 |
lineage1.2.2.2 | 1 |
lineage2.2.1.1;lineage3;lineage4 | 1 |
lineage4.3.4.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | ERR5865953 | MDR-TB | lineage2.2.1 | None | ERR2653107 | Pre-XDR-TB | lineage4.3.3 | None | SRR1723577 | RR-TB | lineage2.2.1 | cn | SRR7755750 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR10379976 | Pre-XDR-TB | lineage4.2.1 | None | ERR2516417 | MDR-TB | lineage4.3.4.2.1 | nl | SRR3743383 | Pre-XDR-TB | lineage4.2.1 | None | ERR2600512 | MDR-TB | lineage2.2.1 | None | ERR2600513 | MDR-TB | lineage2.2.1 | None | SRR6824606 | RR-TB | lineage2.2.1 | cn | SRR10379913 | MDR-TB | lineage4.2.1 | None | ERR1193782 | Pre-XDR-TB | lineage4.3.3 | pt | ERR2653097 | Pre-XDR-TB | lineage4.3.3 | None | ERR2653201 | Pre-XDR-TB | lineage4.3.3 | None | ERR2653183 | MDR-TB | lineage4.3.3 | None | ERR2653238 | Pre-XDR-TB | lineage4.3.3 | None | ERR2653223 | Pre-XDR-TB | lineage4.3.3 | None | SRR7645878 | Pre-XDR-TB | lineage4.2.1 | None | ERR2653146 | Pre-XDR-TB | lineage4.3.3 | None | SRR24710145 | XDR-TB | lineage2.2.1 | None | SRR24256040 | MDR-TB | lineage2.2.1 | None | ERR2652988 | MDR-TB | lineage4.3.3 | None | ERR10680167 | MDR-TB | lineage4.8 | None | ERR2653182 | MDR-TB | lineage4.3.3 | None | ERR4798277 | HR-TB | lineage1.2.2.2 | in | ERR2653237 | Pre-XDR-TB | lineage4.3.3 | None | SRR7755694 | Pre-XDR-TB | lineage4.2.1 | None | ERR4829831 | MDR-TB | lineage2.2.1;lineage4.2.1 | it | ERR1555056 | MDR-TB | lineage4.3.3 | None | ERR2653212 | Pre-XDR-TB | lineage4.3.3 | None | ERR2653087 | MDR-TB | lineage4.3.3 | None | ERR1035343 | MDR-TB | lineage4.3.3 | br | ERR1555049 | MDR-TB | lineage4.3.3 | None | SRR6824427 | MDR-TB | lineage2.2.1 | cn | ERR2653215 | MDR-TB | lineage4.3.3 | None | SRR23311024 | HR-TB | lineage4.2.1 | None | SRR7645987 | Pre-XDR-TB | lineage4.2.1 | None | SRR25827717 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4 | None | SRR28706533 | MDR-TB | lineage2.2.1 | None | SRR7755762 | Pre-XDR-TB | lineage4.2.1 | None | ERR4828019 | MDR-TB | lineage2.2.1 | None | ERR9907795 | MDR-TB | lineage4.3.4.1 | None | ERR13276395 | MDR-TB | lineage4.8 | None | SRR29539846 | MDR-TB | lineage2.2.1 | None | ERR1035206 | HR-TB | lineage4.8 | pt | ERR5865550 | MDR-TB | lineage4.3.3 | None | ERR5865551 | MDR-TB | lineage4.3.3 | None | ERR2653119 | MDR-TB | lineage4.3.3 | None | SRR7755741 | Pre-XDR-TB | lineage4.2.1 | None | ERR2653070 | MDR-TB | lineage4.3.3 | None | ERR2653233 | Pre-XDR-TB | lineage4.3.3 | None | ERR2653176 | MDR-TB | lineage4.3.3 | None | SRR23938636 | MDR-TB | lineage2.2.1 | None | ERR4822418 | Pre-XDR-TB | lineage2.2.1 | ua | SRR6964546 | Pre-XDR-TB | lineage3 | None | ERR2653172 | Pre-XDR-TB | lineage4.3.3 | None | ERR2653216 | MDR-TB | lineage4.3.3 | None |
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