Rv2043c - p.Cys138Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
44 MDR-TB
48 Pre-XDR-TB
6 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage3 | 2 |
| lineage2.2.1 | 81 |
| lineage4.3.3 | 7 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.2 | 1 |
| lineage3 | 2 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4796941 | MDR-TB | lineage1.2.2.2 | in | ERR4800622 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4797291 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266135 | Pre-XDR-TB | lineage2.2.1 | None | ERR024350 | MDR-TB | lineage2.2.1 | None | SRR10380103 | MDR-TB | lineage2.2.1 | None | ERR2516407 | MDR-TB | lineage4.3.3 | nl | SRR29539703 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937127 | MDR-TB | lineage2.2.1 | None | ERR552955 | MDR-TB | lineage2.2.1 | None | ERR552003 | Pre-XDR-TB | lineage4.3.3 | None | SRR19303821 | MDR-TB | lineage2.2.1 | None | SRR5153871 | MDR-TB | lineage2.2.1 | None | ERR4797638 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | in | SRR24709871 | MDR-TB | lineage2.2.1 | None | ERR5865391 | MDR-TB | lineage2.2.1 | None | ERR024351 | MDR-TB | lineage2.2.1 | None | SRR14801330 | MDR-TB | lineage2.2.1;lineage4 | None | ERR13260934 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261397 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865389 | MDR-TB | lineage2.2.1 | None | ERR5866483 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709918 | MDR-TB | lineage2.2.1 | None | ERR13261164 | XDR-TB | lineage2.2.1 | None | ERR13265752 | MDR-TB | lineage2.2.1 | None | SRR6785511 | MDR-TB | lineage2.2.1 | None | ERR13261381 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266548 | Pre-XDR-TB | lineage2.2.1 | None | ERR552099_ERR552098 | MDR-TB | lineage2.2.1 | None | ERR4797926 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4798998 | Pre-XDR-TB | lineage2.2.1;lineage3 | in | ERR4797826 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799838 | XDR-TB | lineage2.2.1 | in | ERR4798722 | Pre-XDR-TB | lineage2.2.1 | in | SRR28858754 | Pre-XDR-TB | lineage2.2.1 | None | ERR552098 | MDR-TB | lineage2.2.1 | None | ERR5864840 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515755 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534411 | MDR-TB | lineage2.2.1 | uz | ERR400382 | Pre-XDR-TB | lineage2.2.1 | gb | ERR137284 | MDR-TB | lineage4.3.3 | ru | ERR133903 | MDR-TB | lineage4.3.3 | ru | ERR2041744 | MDR-TB | lineage2.2.1 | rs | ERR2041742 | MDR-TB | lineage2.2.1 | rs | ERR5864839 | Pre-XDR-TB | lineage2.2.1 | None | DRR130194 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865390 | MDR-TB | lineage2.2.1 | None | SRR7516292 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799021 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827676 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865387 | MDR-TB | lineage2.2.1 | None | ERR5864838 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814937 | MDR-TB | lineage2.2.1 | None | ERR13261398 | Pre-XDR-TB | lineage2.2.1 | None | ERR13244684 | MDR-TB | lineage2.2.1 | None | SRR29681484 | MDR-TB | lineage2.2.1 | None | SRR22048314 | MDR-TB | lineage2.2.1 | None | ERR5864837 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284204 | Pre-XDR-TB | lineage4.3.3 | None | ERR552099 | MDR-TB | lineage2.2.1 | None | ERR13266489 | Pre-XDR-TB | lineage2.2.1 | None | ERR552955_ERR552956 | MDR-TB | lineage2.2.1 | None | SRR14801500 | MDR-TB | lineage2.2.1 | None | SRR11662342 | MDR-TB | lineage2.2.1 | None | SRR29017070 | MDR-TB | lineage1.1.2 | None | ERR4796547 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796532 | Pre-XDR-TB | lineage2.2.1 | in | ERR4553437 | MDR-TB | lineage1.1.2 | None | ERR4796986 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799360 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798681 | Pre-XDR-TB | lineage2.2.1 | in | SRR23310906 | XDR-TB | lineage2.2.1 | None | SRR23340061 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827873 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340036 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639700 | Pre-XDR-TB | lineage4.3.3 | None | SAMEA2535028 | MDR-TB | lineage2.2.1 | uz | ERR1193862 | Pre-XDR-TB | lineage4.3.3 | us | ERR2516898 | Pre-XDR-TB | lineage2.2.1 | gb | ERR133945 | MDR-TB | lineage2.2.1 | ru | SRR6257027 | MDR-TB | lineage2.2.1 | ru | ERR12796608 | Pre-XDR-TB | lineage3.1.2 | None | SRR28434995 | XDR-TB | lineage2.2.1 | None | ERR4798878 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801880 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515160 | Other | lineage3 | za | ERR552956 | MDR-TB | lineage2.2.1 | None | ERR11798546 | MDR-TB | lineage2.2.1 | None | SRR24710203 | MDR-TB | lineage2.2.1 | None | SRR6896259 | Other | lineage3 | None | ERR5865388 | MDR-TB | lineage2.2.1 | None | ERR11068844 | XDR-TB | lineage2.2.1 | None | ERR5864836 | Pre-XDR-TB | lineage2.2.1 | None | SRR28240198 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152902 | MDR-TB | lineage2.2.1 | None | SRR25827881 | MDR-TB | lineage2.2.1 | None | SRR25827435 | XDR-TB | lineage2.2.1.1 | None | SRR29539436 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796339 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797392 | Pre-XDR-TB | lineage2.2.1 | in |
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