lineage | Count |
---|---|
lineage2.2.1 | 23 |
lineage2.2.2 | 152 |
lineage4.1.1.3 | 10 |
lineage1.1.1 | 3 |
lineage2.2.1.1 | 1 |
lineage4.3.4.2.1;lineage4.1.1.3 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage4.2.1 | 1 |
lineage2.2 | 1 |
lineage4.3.3 | 1 |
lineage4.3.4.2 | 2 |
lineage3 | 2 |
spoligotype | Count |
---|---|
None | 199 |
ID | Drug resistance | Lineage | Country iso2 | ERR2510707 | MDR-TB | lineage2.2.1 | it | ERR5917969 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911568 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515144 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873495 | Pre-XDR-TB | lineage2.2.2 | za | ERR1633869 | MDR-TB | lineage2.2.2 | za | ERR4830566 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515448 | MDR-TB | lineage2.2.2 | za | ERR3340724 | Other | lineage4.1.1.3 | za | ERR7911554 | Pre-XDR-TB | lineage2.2.2 | za | SRR3675285 | Pre-XDR-TB | lineage2.2.1 | gb | ERR7911549 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515725 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516019 | Pre-XDR-TB | lineage2.2.2 | za | ERR4811287 | MDR-TB | lineage2.2.1 | cn | ERR4831703 | HR-TB | lineage1.1.1 | vn | ERR7911639 | Pre-XDR-TB | lineage2.2.2 | za | ERR1633949 | Other | lineage4.1.1.3 | za | ERR7911608 | Pre-XDR-TB | lineage2.2.2 | za | SRR2101813 | Other | lineage4.1.1.3 | None | ERR8975738 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911694 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917999 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515544 | MDR-TB | lineage2.2.2 | za | ERR8976036 | MDR-TB | lineage2.2.2 | None | ERR8975718 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403615 | MDR-TB | lineage2.2.2 | za | ERR7911674 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873486 | MDR-TB | lineage2.2.2 | za | SRR5074090 | HR-TB | lineage1.1.1 | vn | SAMN02350470 | MDR-TB | lineage2.2.2 | za | ERR1873460 | Pre-XDR-TB | lineage2.2.2 | za | ERR4798209 | MDR-TB | lineage2.2.1.1 | in | ERR7911595 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917986 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911558 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873507 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873436 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873523 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02350473 | MDR-TB | lineage2.2.2 | za | ERR8975518 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809076 | Pre-XDR-TB | lineage2.2.2 | za | ERR3340711 | Other | lineage4.1.1.3 | za | ERR1873468 | Pre-XDR-TB | lineage2.2.2 | za | ERR8699184 | Other | lineage4.3.4.2.1;lineage4.1.1.3 | None | ERR1035025 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975667 | XDR-TB | lineage2.2.2 | None | ERR4829488 | MDR-TB | lineage4.1.2.1 | it | ERR7911644 | MDR-TB | lineage2.2.2 | za | ERR4810951 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911586 | Pre-XDR-TB | lineage2.2.2 | za | ERR4811295 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5918118 | MDR-TB | lineage2.2.2 | za | ERR8975784 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035031 | Pre-XDR-TB | lineage2.2.2 | za | ERR1035038 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917989 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975710 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917992 | XDR-TB | lineage2.2.2 | za | SRR2101731 | Pre-XDR-TB | lineage2.2.2 | None | ERR8665913 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873504 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515684 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873506 | MDR-TB | lineage4.1.1.3 | za | ERR8976059 | MDR-TB | lineage2.2.2 | None | ERR1034977 | Pre-XDR-TB | lineage2.2.2 | za | ERR3340717 | Other | lineage4.1.1.3 | za | ERR7911696 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873552 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873494 | Pre-XDR-TB | lineage2.2.2 | za | ERR4831741 | MDR-TB | lineage1.1.1 | None | ERR7911562 | Pre-XDR-TB | lineage2.2.2 | za | ERR2512718 | Pre-XDR-TB | lineage2.2.1 | gb | ERR8975642 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975026 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911648 | MDR-TB | lineage2.2.2 | za | SAMN02403616 | MDR-TB | lineage2.2.1 | za | ERR1873553 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917987 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911547 | Pre-XDR-TB | lineage2.2.2;lineage2.2.1 | za | ERR7911551 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873496 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911683 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975920 | XDR-TB | lineage2.2.2 | None | ERR7911528 | Pre-XDR-TB | lineage2.2.2 | za | ERR2517035 | Pre-XDR-TB | lineage2.2.1 | gb | ERR7911093 | MDR-TB | lineage2.2.1 | md | ERR8976046 | Pre-XDR-TB | lineage2.2.2 | None | ERR1023454 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515731 | Other | lineage4.1.1.3 | None | ERR7911060 | MDR-TB | lineage4.2.1 | md | ERR8975032 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976009 | MDR-TB | lineage2.2.2 | None | ERR4830565 | Pre-XDR-TB | lineage2.2.2 | None | ERR8699844 | MDR-TB | lineage2.2.2 | None | ERR8975019 | MDR-TB | lineage2.2.2 | None | ERR1873536 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873529 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873498 | MDR-TB | lineage2.2.2 | za | ERR1873510 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873542 | Pre-XDR-TB | lineage2.2.2 | za | ERR4830510 | MDR-TB | lineage2.2.2 | za | ERR5917984 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516066 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975788 | Pre-XDR-TB | lineage2.2.2 | None | SRR2101511 | Other | lineage4.1.1.3 | None | ERR1873541 | Pre-XDR-TB | lineage2.2.2 | za | SRR23310989 | MDR-TB | lineage2.2 | None | ERR8975089 | Other | lineage4.1.1.3 | None | ERR8976001 | MDR-TB | lineage2.2.2 | None | ERR1873538 | Pre-XDR-TB | lineage2.2.2 | za | ERR1633796 | MDR-TB | lineage2.2.2 | za | ERR8975659 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045245 | Pre-XDR-TB | lineage2.2.1 | gb | ERR1873429 | Pre-XDR-TB | lineage2.2.2 | za | ERR3340712 | Other | lineage4.1.1.3 | za | ERR7911629 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911657 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515519 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911204 | MDR-TB | lineage2.2.2 | za | ERR7911665 | Pre-XDR-TB | lineage2.2.2 | za | ERR4809074 | Pre-XDR-TB | lineage2.2.2 | za | ERR8665901 | Pre-XDR-TB | lineage4.3.3 | None | ERR1873514 | Pre-XDR-TB | lineage2.2.2 | za | ERR2517036 | Pre-XDR-TB | lineage2.2.1 | gb | ERR7911602 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975701 | Pre-XDR-TB | lineage2.2.2 | None | ERR5918004 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873466 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02403614 | MDR-TB | lineage2.2.2 | za | ERR1873525 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873490 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911546 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911613 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911591 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873533 | MDR-TB | lineage2.2.2 | za | ERR8975865 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873520 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873521 | Pre-XDR-TB | lineage2.2.2 | za | ERR1023480 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911640 | MDR-TB | lineage2.2.2 | za | ERR7911607 | Pre-XDR-TB | lineage2.2.2 | za | ERR4810948 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2515768 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911666 | Pre-XDR-TB | lineage2.2.2 | za | ERR2514646 | Pre-XDR-TB | lineage2.2.1 | gb | SRR6046243 | Pre-XDR-TB | lineage2.2.1 | gb | ERR4811280 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5918019 | MDR-TB | lineage2.2.2 | za | ERR8975519 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515466 | MDR-TB | lineage2.2.2 | za | ERR7911544 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR8975782 | Pre-XDR-TB | lineage2.2.2 | None | ERR5918006 | MDR-TB | lineage2.2.2 | za | ERR7911556 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975029 | Pre-XDR-TB | lineage2.2.2 | None | ERR2707199 | MDR-TB | lineage4.3.4.2 | cd | ERR8975007 | Pre-XDR-TB | lineage2.2.2 | None | ERR2706974 | MDR-TB | lineage4.3.4.2 | cd | ERR5918010 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911429 | MDR-TB | lineage2.2.2 | za | SRR2101384 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911565 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911569 | Pre-XDR-TB | lineage2.2.2 | za | ERR2512930 | Pre-XDR-TB | lineage2.2.1 | gb | ERR7911587 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917996 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911598 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911676 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911211 | MDR-TB | lineage2.2.2 | za | ERR1035041 | Pre-XDR-TB | lineage2.2.2 | za | ERR4829827 | Pre-XDR-TB | lineage2.2.1 | it | ERR7911603 | MDR-TB | lineage2.2.2 | za | ERR7911036 | MDR-TB | lineage2.2.1 | md | ERR7911573 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873497 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917979 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516005 | Pre-XDR-TB | lineage2.2.2 | za | ERR5918002 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873503 | Pre-XDR-TB | lineage2.2.2 | za | ERR4810791 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8975778 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873547 | Pre-XDR-TB | lineage2.2.2 | za | ERR1035036 | MDR-TB | lineage2.2.2 | za | ERR4829144 | Pre-XDR-TB | lineage3 | pk | ERR7911545 | Pre-XDR-TB | lineage2.2.2 | za | ERR8686157 | Pre-XDR-TB | lineage2.2.2 | None | ERR2510853 | Pre-XDR-TB | lineage2.2.1 | it | ERR7911645 | Pre-XDR-TB | lineage2.2.2 | za | ERR1035077 | Pre-XDR-TB | lineage2.2.2 | za | ERR4811298 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510647 | Pre-XDR-TB | lineage3 | pk | ERR2515864 | Pre-XDR-TB | lineage2.2.2 | za | SAMN02414982 | Pre-XDR-TB | lineage2.2.2 | se | ERR7911609 | Pre-XDR-TB | lineage2.2.2 | za | SRR6045824 | Pre-XDR-TB | lineage2.2.1 | gb | ERR1034995 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911567 | Pre-XDR-TB | lineage2.2.2 | za |
---|