Rv2043c - p.Cys14Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
5 HR-TB
67 MDR-TB
57 Pre-XDR-TB
8 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 61 |
| lineage4.8 | 27 |
| lineage4.1.2.1 | 7 |
| lineage1.1.2 | 2 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage3.1 | 2 |
| lineage4.6.1.2 | 8 |
| lineage2.2.1.1 | 9 |
| lineage1.2.2.2 | 2 |
| lineage4.2.1 | 5 |
| lineage2.2.2 | 2 |
| lineage4.4.2 | 2 |
| lineage4.1.4 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.2 | 1 |
| lineage3 | 2 |
| lineage2.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 139 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11044004 | XDR-TB | lineage2.2.1 | None | ERR1034717 | MDR-TB | lineage2.2.1 | pe | ERR4798281 | XDR-TB | lineage2.2.1 | in | ERR2510725 | Pre-XDR-TB | lineage4.8 | it | ERR4829854 | Pre-XDR-TB | lineage4.8 | it | ERR4830967 | Pre-XDR-TB | lineage4.1.2.1 | np | ERR3287852 | Pre-XDR-TB | lineage2.2.1 | pe | SRR10040318 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393386 | MDR-TB | lineage4.1.2.1 | None | ERR11798610 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055894 | MDR-TB | lineage1.1.2 | None | SRR7755704 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4553733 | MDR-TB | lineage3.1 | None | SRR13870370 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710016 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285764 | Pre-XDR-TB | lineage2.2.1 | None | ERR1199093 | RR-TB | lineage4.6.1.2 | None | SRR29273821 | MDR-TB | lineage4.8 | None | SRR29231784 | MDR-TB | lineage4.6.1.2 | None | ERR13266637 | XDR-TB | lineage2.2.1.1 | None | ERR4798054 | MDR-TB | lineage1.2.2.2 | in | ERR4798134 | MDR-TB | lineage2.2.1 | in | ERR4798432 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29274058 | MDR-TB | lineage4.8 | None | SRR29273842 | Pre-XDR-TB | lineage4.8 | None | SRR1166220 | MDR-TB | lineage4.8 | ro | SAMN02584616 | Pre-XDR-TB | lineage4.2.1 | md | ERR13194055 | MDR-TB | lineage2.2.2 | None | ERR11043975 | XDR-TB | lineage2.2.1 | None | SRR3085301 | Pre-XDR-TB | lineage4.8 | None | ERR3287589 | MDR-TB | lineage2.2.1 | pe | ERR2707072 | Pre-XDR-TB | lineage4.6.1.2 | cd | ERR751395 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4828830 | MDR-TB | lineage4.8 | None | SRR21276969 | MDR-TB | lineage4.4.2 | None | SRR7645946 | MDR-TB | lineage2.2.1 | None | ERR1952142 | MDR-TB | lineage1.1.2 | ie | ERR1034738 | MDR-TB | lineage2.2.1 | pe | ERR6879019 | MDR-TB | lineage2.2.1 | None | SRR28394029 | MDR-TB | lineage4.1.2.1 | None | SRR10380222 | MDR-TB | lineage2.2.1 | None | SRR14782562 | HR-TB | lineage2.2.1 | None | SRR23311038 | MDR-TB | lineage2.2.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | ERR5866024 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516281 | MDR-TB | lineage4.8 | be | SRR1166146 | Pre-XDR-TB | lineage4.2.1 | None | SRR10808621 | MDR-TB | lineage2.2.1 | None | SRR10147707 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050915 | HR-TB | lineage4.2.2.2 | None | SRR29273769 | MDR-TB | lineage4.8 | None | SRR9738499 | Pre-XDR-TB | lineage4.8 | None | SRR6832119 | MDR-TB | lineage2.2.1 | None | SRR29273948 | MDR-TB | lineage4.8 | None | ERR13266871 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29274214 | Pre-XDR-TB | lineage4.8 | None | SRR22757408 | Pre-XDR-TB | lineage2.2.1 | None | ERR12117960 | MDR-TB | lineage4.3.4.1 | None | ERR6879032 | MDR-TB | lineage2.2.1 | None | SRR23311077 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798611 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782196 | MDR-TB | lineage2.2.1 | None | ERR4798949 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1173140 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273145 | MDR-TB | lineage2.2.1 | None | ERR5866025 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807601 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276174 | XDR-TB | lineage2.2.1 | None | ERR4797506 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800520 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR10762354 | MDR-TB | lineage2.2.1 | None | SAMN02628510 | Pre-XDR-TB | lineage2.2.1 | ir | SRR28351281 | XDR-TB | lineage2.2.1.1 | None | ERR7911261 | MDR-TB | lineage2.2.1 | md | ERR4828775 | MDR-TB | lineage4.8 | it | ERR7911294 | MDR-TB | lineage2.2.1 | vn | ERR2707052 | MDR-TB | lineage4.6.1.2 | cd | ERR2706915 | MDR-TB | lineage4.6.1.2 | cd | SRR9738532 | Pre-XDR-TB | lineage4.8 | None | SRR7755738 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR2516753 | MDR-TB | lineage1.2.1.2.1 | gb | ERR2516340 | MDR-TB | lineage4.8 | be | ERR2516282 | MDR-TB | lineage4.8 | be | ERR2516251 | MDR-TB | lineage4.8 | be | ERR2516167 | MDR-TB | lineage4.8 | be | ERR2516405 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516698 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516451 | MDR-TB | lineage4.1.2.1 | pe | ERR2516597 | XDR-TB | lineage4.1.2.1 | pe | ERR2510824 | MDR-TB | lineage4.8 | it | SRR14781955 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285908 | MDR-TB | lineage2.2.1 | None | SRR7645889 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR10040429 | MDR-TB | lineage2.2.1 | None | SRR3086372 | Pre-XDR-TB | lineage4.8 | None | ERR2510823 | MDR-TB | lineage4.8 | it | ERR4423621 | MDR-TB | lineage4.3.2 | None | SRR14801747 | MDR-TB | lineage2.2.1 | None | ERR2184397 | MDR-TB | lineage2.2.1 | pe | SRR28351637 | MDR-TB | lineage2.2.1 | None | SRR28351199 | MDR-TB | lineage2.2.1 | None | SRR15316185 | MDR-TB | lineage4.4.2 | None | SRR28393628 | MDR-TB | lineage2.2.1 | None | SRR29231672 | MDR-TB | lineage4.6.1.2 | None | SRR25206904 | MDR-TB | lineage2.2.1.1 | None | SRR1169018 | Pre-XDR-TB | lineage4.2.1 | None | SRR3743399 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807693 | Pre-XDR-TB | lineage4.2.1 | None | SRR29274159 | Pre-XDR-TB | lineage4.8 | None | SRR29273991 | MDR-TB | lineage4.8 | None | ERR13232479 | MDR-TB | lineage2.2.1 | None | SRR29230996 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR13194659 | MDR-TB | lineage2.2.2 | None | ERR1654709 | RR-TB | lineage4.6.1.2 | None | ERR13266733 | Pre-XDR-TB | lineage2.2.1 | None | ERR13264963 | MDR-TB | lineage4.8 | None | SRR6807694 | Pre-XDR-TB | lineage4.2.1 | None | ERR15686463 | MDR-TB | lineage3 | None | ERR13266749 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782461 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798536 | Pre-XDR-TB | lineage3 | in | ERR4797815 | MDR-TB | lineage1.2.2.2 | in | SRR22175243 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1174309 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017707 | MDR-TB | lineage3.1 | None | SRR14802196 | Pre-XDR-TB | lineage2.2.1 | None | DRR261166 | HR-TB | lineage2.1 | None | SRR6831864 | MDR-TB | lineage2.2.1 | None | SRR28498567 | MDR-TB | lineage2.2.1 | None | ERR10762464 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910920 | MDR-TB | lineage2.2.1 | md | ERR4830758 | Pre-XDR-TB | lineage2.2.1 | ir | ERR4872271 | XDR-TB | lineage2.2.1 | None | ERR2510724 | Pre-XDR-TB | lineage4.8 | it | SRR14801996 | HR-TB | lineage2.2.1 | None | SRR14782174 | MDR-TB | lineage2.2.1 | None | SRR3085319 | MDR-TB | lineage4.8 | None | SRR14782475 | Pre-XDR-TB | lineage2.2.1 | None | ERR2864280 | Pre-XDR-TB | lineage4.3.4.2 | pt |
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