lineage | Count |
---|---|
lineage2.2.1 | 10 |
lineage4.3.3 | 15 |
lineage4.2.1 | 3 |
lineage2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.3 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 32 |
ID | Drug resistance | Lineage | Country iso2 | ERR1873469 | Pre-XDR-TB | lineage2.2.1 | za | SRR1172082 | MDR-TB | lineage4.3.3 | None | SRR1165710 | MDR-TB | lineage4.3.3 | None | SRR25206853 | MDR-TB | lineage2.2.1 | None | SRR1165661 | MDR-TB | lineage4.3.3 | None | SRR1169173 | MDR-TB | lineage4.2.1 | None | SRR1169131 | MDR-TB | lineage4.3.3 | None | ERR9993133 | XDR-TB | lineage4.3.3 | None | SRR5153886 | MDR-TB | lineage2.2.1 | None | ERR13289325 | Pre-XDR-TB | lineage2.2.1 | None | SRR11828964 | MDR-TB | lineage2.1 | None | SAMN02584604 | MDR-TB | lineage4.2.1 | md | SAMN02403605 | MDR-TB | lineage4.3.3 | za | SRR1169206 | MDR-TB | lineage4.3.3 | None | ERR9992654 | XDR-TB | lineage4.3.3 | None | ERR2020058 | MDR-TB | lineage2.2.1.1 | None | SRR1172152 | MDR-TB | lineage4.3.3 | None | SRR1165682 | MDR-TB | lineage4.3.3 | None | SRR29914415 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011062 | Pre-XDR-TB | lineage2.2.1 | None | SRR6339661 | MDR-TB | lineage4.3.3 | au | SAMN02403604 | MDR-TB | lineage4.3.3 | za | SRR7517681 | MDR-TB | lineage4.1.3 | ci | SRR8651560 | MDR-TB | lineage2.2.1 | cn | ERR7911507 | MDR-TB | lineage2.2.1 | vn | SRR1167387 | MDR-TB | lineage4.3.3 | None | ERR6362190 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870362 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1166331 | MDR-TB | lineage4.2.1 | None | ERR7737671 | MDR-TB | lineage4.3.3 | None | SRR29093883 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971339 | MDR-TB | lineage4.3.3 | None |
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