lineage | Count |
---|---|
lineage2.2.1;lineage4.8 | 1 |
lineage4.2.2.2 | 4 |
lineage2.2.1 | 25 |
lineage4.2.2.1;lineage5 | 2 |
lineage4.1.2.1 | 2 |
lineage2.1 | 3 |
lineage4.3.3 | 3 |
lineage3.1.3 | 1 |
lineage4.8 | 4 |
lineage5 | 2 |
lineage4.2.1 | 3 |
lineage4.4.1.1 | 4 |
lineage2.2.1.1 | 1 |
lineage3.1.1 | 1 |
lineage4.1.3 | 1 |
lineage4.3.4.2 | 1 |
lineage4.6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | ERR403267 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4872146 | MDR-TB | lineage4.2.2.2 | None | ERR403268 | MDR-TB | lineage2.2.1 | None | ERR13290970 | Pre-XDR-TB | lineage2.2.1 | None | SRR30180266 | MDR-TB | lineage2.2.1 | None | ERR11043505 | MDR-TB | lineage4.2.2.1;lineage5 | None | SRR29538931 | Other | lineage4.1.2.1 | None | SRR5065550 | HR-TB | lineage2.2.1 | vn | SRR5073822 | HR-TB | lineage2.1 | vn | ERR4797451 | MDR-TB | lineage4.3.3 | in | ERR13284293 | MDR-TB | lineage2.2.1 | None | ERR11775745 | MDR-TB | lineage2.2.1 | None | SRR671839 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13281466 | MDR-TB | lineage4.2.2.1;lineage5 | None | SRR4423173 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044642 | MDR-TB | lineage3.1.3 | None | SRR10430317 | MDR-TB | lineage2.2.1 | None | SRR23340121 | MDR-TB | lineage4.8 | None | ERR551861 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872081 | MDR-TB | lineage4.2.2.2 | None | ERR4872200 | MDR-TB | lineage5 | None | SRR6257058 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831997 | MDR-TB | lineage2.1 | None | ERR2653167 | MDR-TB | lineage4.8 | None | ERR5865507 | MDR-TB | lineage4.2.1 | None | SRR17234883 | MDR-TB | lineage4.4.1.1 | None | SRR24256294 | MDR-TB | lineage2.2.1 | None | ERR1035088 | MDR-TB | lineage2.2.1.1 | vn | ERR9119550 | MDR-TB | lineage4.2.2.2 | None | SRR17163499 | RR-TB | lineage3.1.1 | None | SRR6257007 | MDR-TB | lineage2.2.1 | ru | SAMEA2534248 | Pre-XDR-TB | lineage2.2.1 | uz | SRR21576572 | MDR-TB | lineage2.2.1 | None | ERR4798106 | Pre-XDR-TB | lineage4.3.3 | in | ERR11082668 | Pre-XDR-TB | lineage4.1.3 | None | ERR5865506 | MDR-TB | lineage4.2.1 | None | SRR6832166 | MDR-TB | lineage2.2.1 | None | SRR11662688 | MDR-TB | lineage2.2.1 | None | SRR16088595 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035291 | Pre-XDR-TB | lineage4.3.4.2 | br | ERR133927 | MDR-TB | lineage2.2.1 | ru | ERR11083051 | MDR-TB | lineage4.4.1.1 | None | ERR4829374 | MDR-TB | lineage4.1.2.1 | it | ERR11069099 | MDR-TB | lineage2.2.1 | None | ERR13285033 | MDR-TB | lineage4.4.1.1 | None | ERR551862 | Pre-XDR-TB | lineage2.2.1 | None | ERR551862_ERR551861 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303292 | MDR-TB | lineage2.2.1 | None | ERR4832049 | MDR-TB | lineage2.1 | vn | SRR24673520 | MDR-TB | lineage4.2.1 | None | SRR5341218 | MDR-TB | lineage4.3.3 | None | SRR28394058 | MDR-TB | lineage4.4.1.1 | None | ERR067581 | MDR-TB | lineage2.2.1 | ru | ERR2516672 | MDR-TB | lineage4.8 | nl | ERR9119487 | MDR-TB | lineage4.2.2.2 | None | ERR9119598 | MDR-TB | lineage5 | None | ERR11776029 | MDR-TB | lineage4.8 | None | SRR16088569 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423668 | Other | lineage4.6.2.2 | None |
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