lineage | Count |
---|---|
lineage4.2.1 | 2 |
lineage4 | 1 |
lineage2.2 | 3 |
lineage4.1.1.3 | 1 |
lineage2.2.1 | 28 |
lineage3 | 2 |
lineage4.1.1 | 3 |
lineage4.1.2.1 | 11 |
lineage4.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 | SRR5153827 | MDR-TB | lineage4.2.1 | None | ERR2229594 | Other | lineage4 | None | SRR23310927 | Pre-XDR-TB | lineage2.2 | None | SRR23310898 | MDR-TB | lineage2.2 | None | SRR5338517 | MDR-TB | lineage4.1.1.3 | None | SRR23311019 | Pre-XDR-TB | lineage2.2 | None | ERR4822420 | MDR-TB | lineage2.2.1 | ua | ERR4799249 | Pre-XDR-TB | lineage3 | in | ERR2516546 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4829168 | MDR-TB | lineage2.2.1 | it | ERR4799668 | Pre-XDR-TB | lineage3 | in | SRR6832285 | MDR-TB | lineage2.2.1 | None | SRR6832798 | MDR-TB | lineage2.2.1 | None | SRR7517688 | MDR-TB | lineage2.2.1 | None | SRR7517818 | MDR-TB | lineage2.2.1 | None | ERR5864393 | MDR-TB | lineage2.2.1 | None | ERR4829822 | MDR-TB | lineage2.2.1 | None | ERR5864395 | MDR-TB | lineage2.2.1 | None | ERR5864397 | MDR-TB | lineage2.2.1 | None | ERR3639702 | MDR-TB | lineage2.2.1 | None | ERR5864392 | MDR-TB | lineage2.2.1 | None | ERR5864398 | MDR-TB | lineage2.2.1 | None | ERR5864399 | MDR-TB | lineage2.2.1 | None | ERR5864394 | MDR-TB | lineage2.2.1 | None | ERR5864396 | MDR-TB | lineage2.2.1 | None | SRR14782265 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087881 | XDR-TB | lineage2.2.1 | None | ERR9907684 | MDR-TB | lineage4.1.1 | None | ERR9907803 | MDR-TB | lineage4.1.1 | None | ERR9907683 | MDR-TB | lineage4.1.1 | None | SRR10305649 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305982 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380023 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782478 | MDR-TB | lineage4.2.1 | None | SRR14801941 | Pre-XDR-TB | lineage2.2.1 | None | ERR11552007 | MDR-TB | lineage4.1.2.1 | None | SRR15364442 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714910 | MDR-TB | lineage2.2.1 | None | SRR1723552 | Pre-XDR-TB | lineage2.2.1 | cn | SRR24256374 | Pre-XDR-TB | lineage2.2.1 | None | ERR11552012 | MDR-TB | lineage4.1.2.1 | None | ERR3014604 | MDR-TB | lineage4.1.2.1 | tn | SRR6824407 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3014587 | MDR-TB | lineage4.1.2.1 | tn | ERR3014581 | MDR-TB | lineage4.1.2.1 | tn | ERR3013479 | MDR-TB | lineage4.1.2.1 | tn | ERR3014583 | MDR-TB | lineage4.1.2.1 | tn | ERR3014595 | MDR-TB | lineage4.1.2.1 | tn | SRR3105804 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR3014594 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014613 | Pre-XDR-TB | lineage4.1.2.1 | tn |
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