lineage | Count |
---|---|
lineage2.2.1 | 26 |
lineage2.2.1.1 | 23 |
lineage4.9 | 1 |
lineage4.2.1 | 10 |
lineage4.8 | 1 |
lineage3.1.1 | 7 |
lineage4.3.4.1 | 3 |
lineage1.2.2.2 | 2 |
lineage2.2.1;lineage4.2.1 | 1 |
lineage2.2;lineage4.2.1 | 1 |
lineage2.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4 | 1 |
lineage4.2.1.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | ERR2510663 | MDR-TB | lineage2.2.1 | it | SRR12062486 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4811306 | MDR-TB | lineage2.2.1 | cn | SRR12062483 | MDR-TB | lineage2.2.1.1 | None | ERR2510735 | Pre-XDR-TB | lineage2.2.1 | it | ERR4830937 | Pre-XDR-TB | lineage2.2.1 | np | ERR13292563 | Pre-XDR-TB | lineage2.2.1 | None | SRR26159057 | Pre-XDR-TB | lineage4.9 | None | SRR5074105 | HR-TB | lineage2.2.1 | vn | SRR10040288 | MDR-TB | lineage2.2.1.1 | None | SRR10040168 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10397097 | MDR-TB | lineage2.2.1 | None | SRR12062488 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR552322 | MDR-TB | lineage4.2.1 | None | ERR2510733 | Pre-XDR-TB | lineage2.2.1 | it | SRR21887780 | MDR-TB | lineage2.2.1.1 | None | SRR12062485 | MDR-TB | lineage2.2.1.1 | None | ERR216923 | HR-TB | lineage4.8 | mw | SAMEA2534564 | MDR-TB | lineage4.2.1 | uz | SRR10040477 | MDR-TB | lineage2.2.1.1 | None | SRR10040326 | MDR-TB | lineage2.2.1 | None | ERR9286000 | MDR-TB | lineage3.1.1 | None | ERR10680131 | MDR-TB | lineage2.2.1 | None | SRR29093953 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911222 | MDR-TB | lineage4.2.1 | md | ERR13243555 | MDR-TB | lineage2.2.1 | None | SRR12062490 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10040410 | MDR-TB | lineage2.2.1.1 | None | SRR12062487 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12062489 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12062541 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2653159 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4553726 | MDR-TB | lineage1.2.2.2 | None | ERR11043797 | MDR-TB | lineage3.1.1 | None | ERR405204 | MDR-TB | lineage3.1.1 | None | ERR7911094 | MDR-TB | lineage4.2.1 | md | SRR7829575 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798656 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR1035341 | MDR-TB | lineage4.3.4.1 | br | SRR25206914 | MDR-TB | lineage2.2.1.1 | None | SRR25206940 | MDR-TB | lineage2.2.1 | None | SRR3743496 | MDR-TB | lineage2.2;lineage4.2.1 | None | SRR25207312 | MDR-TB | lineage2.2.1.1 | None | ERR387002 | MDR-TB | lineage3.1.1 | None | SRR29385482 | MDR-TB | lineage2.2.1.1 | None | ERR11082008 | MDR-TB | lineage4.2.1 | None | SRR7829591 | MDR-TB | lineage2.2.1 | None | SRR14782320 | Pre-XDR-TB | lineage4.2.1 | None | SRR29385426 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040522 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10040516 | MDR-TB | lineage2.2.1.1 | None | SRR28393326 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR12062481 | MDR-TB | lineage2.2.1.1 | None | SRR29093921 | MDR-TB | lineage2.2.1 | None | SRR29093944 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261893 | MDR-TB | lineage4 | None | SRR29539502 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062482 | MDR-TB | lineage2.2.1.1 | None | SRR23310938 | Pre-XDR-TB | lineage4.2.1 | None | SRR6785433 | MDR-TB | lineage4.2.1.1 | None | ERR270784 | MDR-TB | lineage3.1.1 | None | SRR21887756 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206911 | MDR-TB | lineage2.2.1 | None | ERR552321 | MDR-TB | lineage4.2.1 | None | SRR12062491 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR552321_ERR552322 | MDR-TB | lineage4.2.1 | None | SRR29289398 | Pre-XDR-TB | lineage3 | None | SRR10040259 | MDR-TB | lineage2.2.1 | None | SRR29539289 | MDR-TB | lineage2.2.1 | None | SRR21747047 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29017414 | MDR-TB | lineage1.2.2.2 | None | SRR21747028 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR7911030 | MDR-TB | lineage2.2.1 | md | ERR13284732 | MDR-TB | lineage4.2.1 | None | SRR2100884 | MDR-TB | lineage3.1.1 | None | ERR4831646 | MDR-TB | lineage2.2.1 | vn | SRR29016784 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR29539197 | MDR-TB | lineage2.2.1 | None | ERR13283990 | MDR-TB | lineage3.1.1 | None | ERR10762405 | Pre-XDR-TB | lineage2.2.1 | None |
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