lineage | Count |
---|---|
lineage4.3.2.1 | 1 |
lineage1.2.2.2 | 13 |
lineage2.2.1 | 68 |
lineage4.2.1.1 | 10 |
lineage4.3 | 3 |
lineage1.2.2 | 2 |
lineage3.1.3 | 1 |
La3 | 1 |
spoligotype | Count |
---|---|
None | 99 |
ID | Drug resistance | Lineage | Country iso2 | ERR4809229 | MDR-TB | lineage4.3.2.1 | za | ERR4798128 | Other | lineage1.2.2.2 | in | ERR4810467 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4809209 | Pre-XDR-TB | lineage2.2.1 | za | ERR4810468 | MDR-TB | lineage2.2.1 | cn | ERR4810949 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810970 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810942 | MDR-TB | lineage2.2.1 | cn | ERR4810943 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810993 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811160 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5864527 | MDR-TB | lineage4.2.1.1 | None | ERR4811326 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811294 | XDR-TB | lineage2.2.1 | cn | ERR4811354 | MDR-TB | lineage2.2.1 | cn | ERR5864522 | MDR-TB | lineage4.2.1.1 | None | ERR5864520 | MDR-TB | lineage4.2.1.1 | None | ERR5864525 | MDR-TB | lineage4.2.1.1 | None | ERR5864521 | MDR-TB | lineage4.2.1.1 | None | ERR5864523 | MDR-TB | lineage4.2.1.1 | None | ERR5864524 | MDR-TB | lineage4.2.1.1 | None | ERR5864526 | MDR-TB | lineage4.2.1.1 | None | ERR5864528 | MDR-TB | lineage4.2.1.1 | None | ERR5864872 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864871 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864870 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864869 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864866 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864867 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864873 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864868 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305975 | MDR-TB | lineage2.2.1 | None | ERR7902752 | Other | lineage1.2.2.2 | None | ERR7911723 | Pre-XDR-TB | lineage2.2.1 | us | SRR10305977 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305973 | MDR-TB | lineage2.2.1 | None | SRR10500310 | MDR-TB | lineage1.2.2.2 | None | SRR1146372 | MDR-TB | lineage2.2.1 | None | SRR1144743 | MDR-TB | lineage2.2.1 | None | SRR1146316 | MDR-TB | lineage2.2.1 | None | SRR1144778 | MDR-TB | lineage2.2.1 | None | SRR1162806 | MDR-TB | lineage2.2.1 | None | SRR1162851 | MDR-TB | lineage2.2.1 | None | SRR1172309 | Other | lineage1.2.2.2 | None | SRR1169488 | Other | lineage1.2.2.2 | None | SRR1162871 | MDR-TB | lineage2.2.1 | None | SRR1166918 | MDR-TB | lineage2.2.1 | None | SRR1173428 | Pre-XDR-TB | lineage4.3 | None | SRR1173093 | Other | lineage1.2.2.2 | None | SRR14802015 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173584 | Other | lineage1.2.2.2 | None | SRR1173843 | Pre-XDR-TB | lineage4.3 | None | SRR1180217 | Other | lineage1.2.2 | None | SRR1183033 | Other | lineage1.2.2 | None | SRR12142342 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802265 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316023 | MDR-TB | lineage2.2.1 | None | SRR20969395 | MDR-TB | lineage2.2.1 | None | SRR20969901 | MDR-TB | lineage2.2.1 | None | SRR2100820 | Other | lineage1.2.2.2 | None | ERR11068497 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861837 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081492 | Pre-XDR-TB | lineage2.2.1 | None | ERR158607 | Pre-XDR-TB | lineage2.2.1 | gb | SRR3544718 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02599077 | Other | lineage1.2.2.2 | in | SRR3544732 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516994 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2027220 | Other | lineage3.1.3 | None | SAMN02414914 | MDR-TB | lineage2.2.1 | se | SRR3743203 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414915 | MDR-TB | lineage2.2.1 | se | SRR5152959 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153275 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153316 | MDR-TB | lineage4.2.1.1 | None | SRR5153601 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153619 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153621 | Pre-XDR-TB | lineage2.2.1 | None | SRR3544739 | Pre-XDR-TB | lineage2.2.1 | None | SRR3544741 | Pre-XDR-TB | lineage2.2.1 | None | SRR3544751 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024887 | MDR-TB | lineage2.2.1 | cn | SRR5153614 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723632 | MDR-TB | lineage2.2.1 | cn | SRR6824601 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723633 | MDR-TB | lineage2.2.1 | cn | SAMN02628520 | Pre-XDR-TB | lineage4.3 | None | ERR270710 | Other | lineage1.2.2.2 | None | SAMN02599021 | Other | lineage1.2.2.2 | in | ERR4831459 | MDR-TB | lineage1.2.2.2 | None | SRR6824361 | MDR-TB | lineage2.2.1 | cn | ERR2514483 | Other | lineage1.2.2.2 | gb | ERR4820192 | Other | La3 | None | SRR6824362 | MDR-TB | lineage2.2.1 | cn | ERR502949 | MDR-TB | lineage2.2.1 | None | ERR502944 | MDR-TB | lineage2.2.1 | None | ERR502947 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024965 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024882 | MDR-TB | lineage2.2.1 | cn |
---|