lineage | Count |
---|---|
lineage2.2.1 | 15 |
lineage4.3.3 | 15 |
lineage4.1.2.1 | 1 |
lineage4.1.3 | 1 |
lineage4.2.1 | 1 |
lineage4.2.2.1 | 4 |
lineage3 | 1 |
lineage4.8 | 1 |
1 | |
lineage4.1.1.3 | 2 |
lineage4.3.4.1 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | SRR6832260 | MDR-TB | lineage2.2.1 | None | ERR4872344 | XDR-TB | lineage2.2.1 | None | ERR10762474 | MDR-TB | lineage4.3.3 | None | SRR9613556 | MDR-TB | lineage4.1.2.1 | None | ERR11043918 | MDR-TB | lineage4.3.3 | None | ERR11043574 | HR-TB | lineage4.1.3 | None | ERR11798773 | MDR-TB | lineage4.2.1 | None | SRR1165618 | MDR-TB | lineage4.3.3 | None | SRR1165700 | MDR-TB | lineage4.3.3 | None | SRR18714870 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167371 | MDR-TB | lineage4.3.3 | None | SRR1172080 | MDR-TB | lineage4.3.3 | None | SRR14807572 | MDR-TB | lineage2.2.1 | None | SRR24255907 | MDR-TB | lineage2.2.1 | None | SRR1167362 | MDR-TB | lineage4.3.3 | None | SRR1169134 | MDR-TB | lineage4.3.3 | None | SRR1169223 | MDR-TB | lineage4.3.3 | None | SRR1169308 | MDR-TB | lineage4.3.3 | None | SRR11786869 | MDR-TB | lineage2.2.1 | None | SRR14807466 | XDR-TB | lineage2.2.1 | None | SRR15368989 | MDR-TB | lineage2.2.1 | None | SRR24709880 | MDR-TB | lineage2.2.1 | None | ERR11068679 | MDR-TB | lineage2.2.1 | None | SRR21277854 | MDR-TB | lineage2.2.1 | None | ERR2041731 | MDR-TB | lineage4.2.2.1 | rs | SRR5341434 | Pre-XDR-TB | lineage3 | in | SRR3085263 | MDR-TB | lineage2.2.1 | None | SRR671754 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2041786 | MDR-TB | lineage4.2.2.1 | rs | ERR2041780 | MDR-TB | lineage4.2.2.1 | rs | ERR2041700 | MDR-TB | lineage4.2.2.1 | None | SRR6824596 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2229584 | Other | lineage4.8 | None | SRR6257009 | MDR-TB | lineage2.2.1 | ru | SRR5153850 | MDR-TB | lineage4.3.3 | None | SAMN02403571 | MDR-TB | lineage4.3.3 | za | ERR7910922 | MDR-TB | lineage4.3.3 | md | ERR1193683 | MDR-TB | lineage4.3.3 | gn | SRR8791249 | RR-TB | None | ERR3256128 | MDR-TB | lineage4.1.1.3 | ph | SAMN02403570 | MDR-TB | lineage4.3.3 | za | ERR2516493 | MDR-TB | lineage4.3.4.1 | pe | ERR3256127 | MDR-TB | lineage4.1.1.3 | ph |
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