Rv2043c - p.His71Tyr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
5 RR-TB
3 HR-TB
114 MDR-TB
147 Pre-XDR-TB
30 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 4 |
| lineage2.2.1.1 | 49 |
| lineage4.1.2.1 | 128 |
| lineage2.2.1 | 60 |
| lineage4.3.3 | 10 |
| lineage2.2.2 | 2 |
| lineage4.8 | 10 |
| lineage4.2.1 | 4 |
| lineage2.2.1;lineage3 | 2 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage4.5 | 5 |
| lineage2.2.1.1;lineage3.1.2;lineage4.4 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.1;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 6 |
| lineage2.2.1.1;lineage4.8 | 1 |
| lineage1.1.2 | 2 |
| lineage4.2.2.2 | 2 |
| lineage1.1.1.1;lineage2.2.1 | 1 |
| lineage3;lineage4.3.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| lineage2.2.1.1;lineage3 | 2 |
| lineage2.2.2;lineage4.1.2.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 301 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28394065 | MDR-TB | lineage4.3.2 | None | SRR28045972 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4830930 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4809252 | MDR-TB | lineage4.1.2.1 | za | ERR4830934 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4830943 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR833131 | MDR-TB | lineage4.1.2.1 | None | SRR2101574 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMN02053753 | MDR-TB | lineage4.1.2.1 | za | ERR2516953 | MDR-TB | lineage2.2.1 | gb | ERR2516866 | MDR-TB | lineage2.2.1 | gb | ERR2516826 | MDR-TB | lineage2.2.1 | gb | ERR2516759 | MDR-TB | lineage2.2.1 | gb | ERR2516973 | MDR-TB | lineage2.2.1 | gb | ERR553053 | MDR-TB | lineage4.1.2.1 | sz | SRR960978 | MDR-TB | lineage2.2.1 | cn | SRR6807708 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807747 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799342 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6832223 | MDR-TB | lineage2.2.1 | None | SAMN02053751 | MDR-TB | lineage4.3.3 | za | SRR21732547 | MDR-TB | lineage4.1.2.1 | None | SAMN02585961 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR5341238 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29539499 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119818 | MDR-TB | lineage2.2.2 | None | ERR4815940 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25827354 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10525371 | RR-TB | lineage4.8 | None | ERR2517083 | MDR-TB | lineage2.2.1 | gb | ERR11798766 | MDR-TB | lineage4.2.1 | None | ERR4872295 | XDR-TB | lineage2.2.1 | None | ERR5865299 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865139 | MDR-TB | lineage2.2.1 | None | ERR13289321 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1180181 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289284 | MDR-TB | lineage4.1.2.1 | None | ERR13289396 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13286125 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969737 | Other | lineage2.2.1 | None | ERR13289058 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289376 | MDR-TB | lineage4.1.2.1 | None | ERR13289282 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13286066 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13286133 | MDR-TB | lineage4.1.2.1 | None | ERR9992670 | XDR-TB | lineage4.1.2.1 | None | ERR13286038 | XDR-TB | lineage4.1.2.1 | None | ERR9992693 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9993148 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2515361 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR1181279 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10315617 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR5918116 | XDR-TB | lineage4.1.2.1 | za | SRR6785192 | MDR-TB | lineage2.2.1 | None | SRR833032 | MDR-TB | lineage4.1.2.1 | None | ERR5865297 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737696 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13180433 | MDR-TB | lineage4.8 | None | ERR7737672 | MDR-TB | lineage2.2.1 | None | ERR10112895 | MDR-TB | lineage4.3.2 | None | ERR9806949 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR3743494 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773741 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4796368 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1180419 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5153272 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992674 | XDR-TB | lineage4.1.2.1 | None | ERR9993086 | XDR-TB | lineage4.1.2.1 | None | SRR6916544 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR6896411 | MDR-TB | lineage4.1.2.1 | None | SRR6896523 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7755658 | Pre-XDR-TB | lineage4.2.1 | None | ERR10748222 | MDR-TB | lineage4.1.2.1 | None | SRR6896197 | MDR-TB | lineage4.1.2.1 | None | SRR1183124 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288920 | XDR-TB | lineage4.1.2.1 | None | ERR13267112 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10112842 | Pre-XDR-TB | lineage4.3.2 | None | ERR4831595 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971367 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13276051 | MDR-TB | lineage2.2.1 | None | SRR7755704 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR7652978 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101482 | MDR-TB | lineage4.1.2.1 | None | SRR21276965 | RR-TB | lineage2.2.1 | None | SRR9971345 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488651 | MDR-TB | lineage4.1.2.1 | None | ERR8025355 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1166267 | MDR-TB | lineage2.2.1 | None | ERR13273234 | MDR-TB | lineage2.2.1 | None | SRR833075 | MDR-TB | lineage4.1.2.1 | None | ERR5987408 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1169111 | MDR-TB | lineage2.2.1 | None | ERR4816102 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR832981 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR1063895 | MDR-TB | lineage4.1.2.1 | None | ERR13266112 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR9971101 | XDR-TB | lineage4.1.2.1 | None | ERR2510312 | MDR-TB | lineage4.5 | pk | ERR13288958 | XDR-TB | lineage4.3.3 | None | ERR2510413 | Pre-XDR-TB | lineage4.5 | pk | ERR13261471 | Pre-XDR-TB | lineage2.2.1.1;lineage3.1.2;lineage4.4 | None | SRR7653015 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797061 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR10748250 | XDR-TB | lineage4.1.2.1 | None | ERR4796972 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798240 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797047 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798356 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798726 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798953 | MDR-TB | lineage2.2.1.1 | in | ERR4797413 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799730 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799853 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR9738556 | Pre-XDR-TB | lineage4.8 | None | SRR6356946 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4796776 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800059 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR4034389 | MDR-TB | lineage4.1.2.1 | za | SRR4034388 | MDR-TB | lineage4.1.2.1 | za | SRR4034390 | MDR-TB | lineage4.1.2.1 | za | SRR4034387 | MDR-TB | lineage4.1.2.1 | za | SAMN02584653 | MDR-TB | lineage2.2.1 | md | ERR3287768 | MDR-TB | lineage4.3.4.2 | pe | SRR6356925 | MDR-TB | lineage2.2.1 | None | ERR4828444 | MDR-TB | lineage1.1.1;lineage2.2 | vn | ERR7911039 | Pre-XDR-TB | lineage2.2.1 | md | ERR7911682 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR5865298 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276932 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971281 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4816578 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2515982 | MDR-TB | lineage4.1.2.1 | za | ERR2515542 | MDR-TB | lineage4.1.2.1 | za | ERR2515583 | MDR-TB | lineage4.1.2.1 | za | ERR2516017 | MDR-TB | lineage4.1.2.1 | za | ERR2515588 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515667 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2516023 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515135 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2516045 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR553216 | MDR-TB | lineage4.1.2.1 | sz | ERR10762331 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02585972 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | ERR5865138 | MDR-TB | lineage2.2.1 | None | ERR11082705 | MDR-TB | lineage2.2.1 | None | SRR10380031 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231180 | MDR-TB | lineage2.2.1.1 | None | SRR7592379 | MDR-TB | lineage4.8 | None | ERR9992854 | XDR-TB | lineage4.1.2.1 | None | SRR7653024 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289276 | XDR-TB | lineage4.1.2.1 | None | ERR13289265 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289347 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR25827379 | Pre-XDR-TB | lineage2.2.1.1;lineage4.8 | None | ERR2516027 | HR-TB | lineage4.4.1.1.1 | None | ERR8975760 | XDR-TB | lineage4.1.2.1 | None | ERR9992678 | XDR-TB | lineage4.1.2.1 | None | ERR2516091 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR1169036 | MDR-TB | lineage2.2.1 | None | SRR9971071 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9030456 | MDR-TB | lineage1.1.2 | None | ERR11798530 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082342 | MDR-TB | lineage4.2.2.2 | None | SRR9971183 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13284477 | MDR-TB | lineage2.2.1 | None | ERR13273365 | MDR-TB | lineage2.2.1 | None | ERR9992692 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR7737652 | MDR-TB | lineage4.1.2.1 | None | ERR9806800 | MDR-TB | lineage4.1.2.1 | None | SRR29055908 | MDR-TB | lineage4.1.2.1 | None | ERR13292572 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662346 | MDR-TB | lineage2.2.1 | None | SRR6207282 | MDR-TB | lineage4.1.2.1 | None | ERR9806894 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR14782345 | MDR-TB | lineage4.2.1 | None | ERR10610164 | MDR-TB | lineage4.1.2.1 | None | SRR29274013 | Pre-XDR-TB | lineage4.8 | None | SRR29055668 | MDR-TB | lineage4.1.2.1 | None | ERR9806812 | MDR-TB | lineage4.1.2.1 | None | ERR11488403 | MDR-TB | lineage4.1.2.1 | None | SRR29274144 | RR-TB | lineage4.8 | None | SRR1181171 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971236 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | SRR29056355 | MDR-TB | lineage4.1.2.1 | None | ERR13288945 | XDR-TB | lineage4.1.2.1 | None | ERR11488762 | MDR-TB | lineage4.1.2.1 | None | SRR29051193 | MDR-TB | lineage1.1.1.1;lineage2.2.1 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | SRR29681275 | MDR-TB | lineage2.2.1 | None | ERR11488567 | MDR-TB | lineage4.1.2.1 | None | SRR26936943 | MDR-TB | lineage2.2.1 | None | ERR13261264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29289410 | Pre-XDR-TB | lineage4.5 | None | ERR13284241 | MDR-TB | lineage4.2.2.2 | None | ERR4796382 | Pre-XDR-TB | lineage4.3.3 | in | ERR4796442 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796261 | Pre-XDR-TB | lineage4.3.3 | in | ERR4798317 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798305 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR9806802 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4797727 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797849 | XDR-TB | lineage2.2.1.1 | in | SRR833128 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4797114 | MDR-TB | lineage3;lineage4.3.3 | in | ERR11773716 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR5917970 | XDR-TB | lineage4.3.3 | za | ERR4809071 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR10315628 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4830909 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR6485126 | MDR-TB | lineage2.2.1 | None | ERR8975773 | Pre-XDR-TB | lineage4.3.2 | None | ERR8975683 | RR-TB | lineage4.4.1.1.1 | None | ERR8975696 | XDR-TB | lineage4.1.2.1 | None | ERR9992645 | XDR-TB | lineage4.1.2.1 | None | SRR10315618 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1180276 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8976096 | MDR-TB | lineage4.1.2.1 | None | SRR7755738 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR28646058 | MDR-TB | lineage4.8 | None | ERR2510492 | MDR-TB | lineage4.5 | None | ERR2516939 | MDR-TB | lineage4.5 | gb | SRR7592378 | Pre-XDR-TB | lineage4.8 | None | SRR833194 | MDR-TB | lineage4.1.2.1 | None | SRR3544733 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610161 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6785197 | MDR-TB | lineage2.2.1 | None | SAMN02053783 | MDR-TB | lineage4.1.2.1 | za | ERR11465782 | Other | lineage4.4.1.1 | None | SRR29385421 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748163 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29681276 | MDR-TB | lineage2.2.1 | None | SRR1181284 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9993049 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR21276944 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13289025 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR4797865 | XDR-TB | lineage2.2.1.1 | in | ERR4798254 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13286118 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4799634 | XDR-TB | lineage2.2.1.1 | in | SRR14801888 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516166 | MDR-TB | lineage4.8 | be | ERR9992701 | XDR-TB | lineage4.1.2.1 | None | ERR9992702 | XDR-TB | lineage4.1.2.1 | None | ERR13289264 | XDR-TB | lineage4.4.1.1.1 | None | ERR4799657 | XDR-TB | lineage2.2.1.1 | None | ERR2515264 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515615 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515199 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515739 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR26558620 | MDR-TB | lineage2.2.1 | None | SRR25827343 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR16088056 | MDR-TB | lineage2.2.1 | None | SRR833163 | MDR-TB | lineage4.3.3 | None | SRR10379921 | MDR-TB | lineage2.2.1 | None | SRR6356999 | MDR-TB | lineage2.2.1 | None | ERR11775345 | MDR-TB | lineage4.1.2.1 | None | SRR29772538 | MDR-TB | lineage1.1.2 | None | ERR13260873 | MDR-TB | lineage4.4.1.1.1 | None | ERR4800098 | HR-TB | lineage2.2.1.1 | None | ERR13288870 | MDR-TB | lineage2.2.2;lineage4.1.2.1 | None | SRR26399161 | MDR-TB | lineage2.2.1 | None | SRR25827310 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR7737839 | MDR-TB | lineage2.2.1 | None | SRR833074 | MDR-TB | lineage4.3.3 | None | SRR6982216 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR25827344 | XDR-TB | lineage2.2.1.1 | None | ERR13285770 | Pre-XDR-TB | lineage4.2.1 | None | SRR25827312 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25827447 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SRR25827810 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR25827594 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9993017 | XDR-TB | lineage4.1.2.1 | None | SRR6856031 | HR-TB | lineage4.4.1.1.1 | None | SRR25827670 | MDR-TB | lineage4.3.3 | None | SRR1181092 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3335785 | Pre-XDR-TB | lineage2.2.1 | pk | ERR10610314 | MDR-TB | lineage4.1.2.1 | None | SRR10315629 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29056348 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4799358 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798970 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR15014771 | MDR-TB | lineage3 | None | ERR4797945 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR11067853 | MDR-TB | lineage2.2.1 | None | SRR26331632 | MDR-TB | lineage4.1.2.1 | None | SRR833038 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29273787 | XDR-TB | lineage4.8 | None | ERR4798330 | XDR-TB | lineage2.2.1.1 | in | ERR4798351 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798416 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR28351330 | Pre-XDR-TB | lineage4.3.3 | None | SRR1166187 | MDR-TB | lineage2.2.1 | None | ERR9992907 | XDR-TB | lineage4.1.2.1 | None | SRR4034386 | MDR-TB | lineage4.1.2.1 | za | SAMN02584608 | MDR-TB | lineage2.2.1 | md | ERR7737700 | MDR-TB | lineage4.1.2.1 | None |
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