Rv2043c - p.His82Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
4 HR-TB
54 MDR-TB
32 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 2 |
| lineage4.3.4.1 | 4 |
| lineage4.6.1.2 | 3 |
| lineage4.2.2.1 | 23 |
| lineage2.2.1 | 30 |
| lineage1.1.1.1 | 1 |
| lineage4.3 | 22 |
| lineage1.2.2.2 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage4.3.3 | 7 |
| lineage4.2.1 | 5 |
| lineage4.9 | 2 |
| lineage4.3;lineage4.9 | 1 |
| lineage3 | 5 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1;lineage4.3 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2707229 | MDR-TB | lineage4.3.2 | cd | ERR2707233 | MDR-TB | lineage4.3.4.1 | cd | ERR2706933 | MDR-TB | lineage4.3.4.1 | cd | ERR2707009 | MDR-TB | lineage4.6.1.2 | cd | SRR16149162 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR234671 | MDR-TB | lineage2.2.1 | ru | ERR137234 | MDR-TB | lineage2.2.1 | ru | ERR2516730 | MDR-TB | lineage2.2.1 | nl | ERR137216 | HR-TB | lineage2.2.1 | ru | SRR6339663 | MDR-TB | lineage1.1.1.1 | None | SRR12420331 | Pre-XDR-TB | lineage2.2.1 | None | SRR29230994 | MDR-TB | lineage4.3.2 | None | SRR10809038 | Other | lineage4.3 | None | ERR108484 | MDR-TB | lineage2.2.1 | ru | SRR5341244 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR5341243 | Other | lineage1.2.2.2;lineage2.2.1 | in | SRR16149121 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR21277275 | Pre-XDR-TB | lineage2.2.1 | None | SRR6480321 | Other | lineage4.3 | None | SRR16149179 | MDR-TB | lineage4.2.2.1 | None | SRR12416821 | MDR-TB | lineage4.3.3 | None | ERR5917728 | MDR-TB | lineage2.2.1 | by | ERR5917760 | MDR-TB | lineage2.2.1 | by | SRR6480415 | Other | lineage4.3 | None | SRR14165140 | MDR-TB | lineage4.3.3 | None | SRR29274272 | MDR-TB | lineage4.2.2.1 | None | SRR29274265 | MDR-TB | lineage4.2.2.1 | None | SRR16149160 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR16149181 | MDR-TB | lineage4.2.2.1 | None | SRR29231707 | MDR-TB | lineage4.6.1.2 | None | SRR23938675 | Pre-XDR-TB | lineage2.2.1 | None | SRR16149131 | MDR-TB | lineage4.2.2.1 | None | ERR3273168 | MDR-TB | lineage4.3 | None | SRR10809207 | Other | lineage4.3 | None | ERR3273118 | MDR-TB | lineage4.3 | None | ERR234670 | MDR-TB | lineage2.2.1 | None | SRR22251265 | Other | lineage4.3 | None | ERR3273189 | RR-TB | lineage4.3 | None | SRR16149154 | MDR-TB | lineage4.2.2.1 | None | SRR22536487 | Pre-XDR-TB | lineage4.3.3 | None | SRR7755671 | Pre-XDR-TB | lineage4.2.1 | None | ERR8774236 | Pre-XDR-TB | lineage4.9 | None | ERR4830963 | Pre-XDR-TB | lineage2.2.1 | np | ERR11069066 | MDR-TB | lineage4.2.2.1 | None | SRR7755664 | Pre-XDR-TB | lineage4.2.1 | None | SRR13232450 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808966 | Other | lineage4.3 | None | SRR22536481 | Pre-XDR-TB | lineage4.3.3 | None | SRR6480363 | Other | lineage4.3 | None | ERR11082337 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR10808789 | Other | lineage4.3 | None | ERR3273087 | MDR-TB | lineage4.3 | None | SRR7653018 | Pre-XDR-TB | lineage4.3.3 | None | SRR7655790 | MDR-TB | lineage2.2.1 | None | ERR9634311 | Other | lineage4.3 | None | ERR13277094 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR10809039 | Other | lineage4.3 | None | SRR10809051 | HR-TB | lineage4.3;lineage4.9 | None | ERR13284292 | MDR-TB | lineage4.2.2.1 | None | SRR6480607 | Other | lineage4.3 | None | SRR7755762 | Pre-XDR-TB | lineage4.2.1 | None | ERR5865617 | MDR-TB | lineage2.2.1 | None | SRR29356632 | MDR-TB | lineage4.3.3 | None | ERR11082782 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR4800123 | Other | lineage3 | None | SRR30182661 | Other | lineage4.3 | None | SRR6480368 | Other | lineage4.3 | None | SRR6356923 | MDR-TB | lineage4.8 | None | SRR21276948 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796412 | Pre-XDR-TB | lineage2.2.1 | None | ERR1654663 | MDR-TB | lineage4.6.1.2 | None | ERR13110321 | HR-TB | lineage4.1.1.3 | None | SRR16149149 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR29231748 | MDR-TB | lineage4.3.4.1 | None | ERR5865633 | MDR-TB | lineage2.2.1 | None | SRR29274269 | MDR-TB | lineage4.2.2.1 | None | SRR22536485 | Pre-XDR-TB | lineage4.3.3 | None | ERR11050565 | Other | lineage4.3 | None | SRR16149178 | MDR-TB | lineage4.2.2.1 | None | ERR2516297 | Pre-XDR-TB | lineage2.2.1 | be | SRR10430378 | MDR-TB | lineage2.2.1 | None | SRR7646041 | Pre-XDR-TB | lineage4.2.1 | None | ERR5865634 | MDR-TB | lineage2.2.1 | None | SRR29274243 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR6480617 | Other | lineage4.1.2.1;lineage4.3 | None | SRR10809103 | Other | lineage4.3 | None | SRR29538889 | MDR-TB | lineage2.2.1 | None | ERR13262949 | Other | lineage4.3 | None | SRR10040183 | MDR-TB | lineage2.2.1 | None | SRR15316361 | MDR-TB | lineage4.4.2 | None | ERR13291008 | MDR-TB | lineage2.2.1 | None | SRR29681432 | MDR-TB | lineage2.2.1 | None | SRR10397110 | HR-TB | lineage2.2.1 | None | SRR10808523 | Other | lineage4.3 | None | SRR29274240 | MDR-TB | lineage4.2.2.1 | None | ERR5865616 | MDR-TB | lineage2.2.1 | None | SRR16149157 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR13232565 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274273 | MDR-TB | lineage4.2.2.1 | None | ERR2510513 | MDR-TB | lineage3 | pk | ERR4796458 | MDR-TB | lineage3 | in | ERR4798740 | Pre-XDR-TB | lineage3 | in | SRR16149177 | MDR-TB | lineage4.2.2.1 | None | ERR9634310 | Other | lineage4.3 | None | SRR14782245 | MDR-TB | lineage4.2.1 | None | SRR10303352 | MDR-TB | lineage2.2.1 | None | ERR4800253 | MDR-TB | lineage3 | in | ERR4423622 | Pre-XDR-TB | lineage4.9 | None | SRR29231821 | MDR-TB | lineage4.3.4.1 | None | SRR16149137 | MDR-TB | lineage4.2.2.1 | None | ERR4829486 | Pre-XDR-TB | lineage4.1.2 | it | SRR2024988 | Pre-XDR-TB | lineage2.2.1 | cn |
|---|
