lineage | Count |
---|---|
lineage2.2.2 | 19 |
lineage3 | 2 |
lineage2.2.1 | 87 |
lineage4.8 | 1 |
lineage2.2 | 2 |
lineage2 | 1 |
lineage4.3.3 | 1 |
lineage4.9 | 1 |
lineage4.3.3;lineage2.2.1 | 2 |
spoligotype | Count |
---|---|
None | 116 |
ID | Drug resistance | Lineage | Country iso2 | ERR10610064 | MDR-TB | lineage2.2.2 | None | ERR2510644 | MDR-TB | lineage3 | pk | SRR3675220 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153864 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677418 | Pre-XDR-TB | lineage2.2.1 | de | ERR2677467 | Pre-XDR-TB | lineage2.2.1 | de | SRR5153220 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517047 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516502 | MDR-TB | lineage4.8 | pe | ERR2515705 | MDR-TB | lineage2.2.2 | za | ERR2516798 | Pre-XDR-TB | lineage2.2.1 | gb | ERR4827437 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310922 | Pre-XDR-TB | lineage2.2 | None | ERR4827893 | MDR-TB | lineage2.2.1 | None | ERR4830898 | MDR-TB | lineage2.2.1 | None | ERR4830152 | Pre-XDR-TB | lineage2.2.1 | tj | ERR4828783 | MDR-TB | lineage2.2.1 | None | ERR4830165 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257026 | MDR-TB | lineage2.2.1 | None | SRR6257006 | MDR-TB | lineage2.2.1 | None | ERR4872349 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831404 | XDR-TB | lineage2.2.1 | de | ERR4872274 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257071 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132076 | MDR-TB | lineage2.2 | None | SRR6832171 | Pre-XDR-TB | lineage2 | None | SRR6831816 | MDR-TB | lineage2.2.1 | None | SRR6785496 | MDR-TB | lineage2.2.1 | None | ERR11067399 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831732 | MDR-TB | lineage2.2.1 | None | SRR6832440 | MDR-TB | lineage2.2.1 | None | SRR6832755 | MDR-TB | lineage2.2.1 | None | SRR6832829 | MDR-TB | lineage2.2.1 | None | SRR6807703 | MDR-TB | lineage2.2.1 | None | SRR7516404 | Pre-XDR-TB | lineage2.2.1 | None | SRR7781500 | MDR-TB | lineage2.2.1 | None | SRR7516405 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645907 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755666 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755665 | Pre-XDR-TB | lineage4.3.3 | None | SRR7755709 | Pre-XDR-TB | lineage2.2.1 | None | DRR184906 | MDR-TB | lineage2.2.1 | vn | ERR10748415 | MDR-TB | lineage2.2.2 | None | ERR10762253 | MDR-TB | lineage2.2.1 | None | ERR10748561 | MDR-TB | lineage2.2.2 | None | ERR11042969 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762279 | MDR-TB | lineage2.2.1 | None | ERR11043511 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043701 | MDR-TB | lineage2.2.1 | None | ERR3639746 | MDR-TB | lineage2.2.1 | None | ERR11043690 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044562 | Other | lineage3 | None | ERR1213851 | MDR-TB | lineage2.2.2 | kr | ERR4276867 | XDR-TB | lineage2.2.1 | None | ERR4011120 | Pre-XDR-TB | lineage2.2.2 | None | ERR4276868 | XDR-TB | lineage2.2.1 | None | ERR4809349 | MDR-TB | lineage2.2.2 | za | ERR5864888 | MDR-TB | lineage2.2.1 | None | ERR5864889 | MDR-TB | lineage2.2.1 | None | ERR5864890 | MDR-TB | lineage2.2.1 | None | ERR5865799 | MDR-TB | lineage2.2.1 | None | ERR5865947 | MDR-TB | lineage2.2.1 | None | ERR5865800 | MDR-TB | lineage2.2.1 | None | ERR5865946 | MDR-TB | lineage2.2.1 | None | ERR5865871 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865872 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865948 | MDR-TB | lineage2.2.1 | None | ERR7910931 | MDR-TB | lineage2.2.1 | md | ERR5865964 | MDR-TB | lineage2.2.1 | None | ERR5866113 | MDR-TB | lineage2.2.1 | None | ERR5866311 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866312 | Pre-XDR-TB | lineage2.2.1 | None | ERR7362020 | MDR-TB | lineage2.2.1 | None | ERR5866011 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866114 | MDR-TB | lineage2.2.1 | None | ERR5866313 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917982 | MDR-TB | lineage2.2.2 | za | ERR5987373 | MDR-TB | lineage2.2.2 | None | ERR7911226 | Pre-XDR-TB | lineage2.2.1 | md | ERR7911667 | Pre-XDR-TB | lineage2.2.2 | za | ERR7975649 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774586 | MDR-TB | lineage2.2.1 | None | ERR8665722 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975659 | MDR-TB | lineage2.2.1 | None | ERR8665526 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665723 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975704 | XDR-TB | lineage2.2.2 | None | ERR9027228 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975826 | MDR-TB | lineage2.2.2 | None | ERR11050135 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119820 | MDR-TB | lineage2.2.2 | None | ERR9992801 | Pre-XDR-TB | lineage2.2.2 | None | SRR10397210 | MDR-TB | lineage2.2.1 | None | ERR9992900 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992797 | XDR-TB | lineage2.2.2 | None | ERR9992997 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993193 | Pre-XDR-TB | lineage2.2.2 | None | SRR13068992 | MDR-TB | lineage4.9 | None | SRR13232458 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | SRR14801310 | MDR-TB | lineage2.2.1 | None | SRR13232456 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | SRR13232657 | MDR-TB | lineage2.2.1 | None | SRR13232697 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782520 | Pre-XDR-TB | lineage2.2.1 | None | SRR1577806 | MDR-TB | lineage2.2.1 | None | SRR14807627 | XDR-TB | lineage2.2.1 | None | SRR18714956 | Pre-XDR-TB | lineage2.2.1 | None | SRR1577830 | MDR-TB | lineage2.2.1 | None | SRR16088264 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714834 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715077 | MDR-TB | lineage2.2.1 | None | SRR18715081 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715490 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806685 | MDR-TB | lineage2.2.2 | None | ERR11069124 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938605 | MDR-TB | lineage2.2.1 | None |
---|