Rv2043c - p.Ile31Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
113 MDR-TB
84 Pre-XDR-TB
11 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 182 |
| lineage2.2.1;lineage4.3.3 | 3 |
| lineage2.2.2 | 22 |
| lineage4.8 | 1 |
| lineage3 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 210 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29681316 | MDR-TB | lineage2.2.1 | None | SRR29539658 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR18714956 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284609 | MDR-TB | lineage2.2.1 | None | SRR1577830 | MDR-TB | lineage2.2.1 | None | SRR24256035 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865800 | MDR-TB | lineage2.2.1 | None | SRR7755666 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600592 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774586 | MDR-TB | lineage2.2.1 | None | SRR18715490 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809349 | MDR-TB | lineage2.2.2 | za | SRR28498382 | XDR-TB | lineage2.2.1 | None | ERR7911226 | Pre-XDR-TB | lineage2.2.1 | md | ERR551647 | MDR-TB | lineage2.2.1 | None | SRR6807703 | MDR-TB | lineage2.2.1 | None | ERR7910931 | MDR-TB | lineage2.2.1 | md | ERR553011 | MDR-TB | lineage2.2.1 | None | ERR8665722 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785496 | MDR-TB | lineage2.2.1 | None | ERR8975704 | XDR-TB | lineage2.2.2 | None | ERR552453 | MDR-TB | lineage2.2.1 | None | ERR2516798 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516502 | MDR-TB | lineage4.8 | pe | ERR4872349 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600566 | Pre-XDR-TB | lineage2.2.1 | None | SRR28434985 | MDR-TB | lineage2.2.1 | None | SRR29539117 | MDR-TB | lineage2.2.1 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677467 | Pre-XDR-TB | lineage2.2.1 | de | ERR1213851 | MDR-TB | lineage2.2.2 | kr | ERR5866113 | MDR-TB | lineage2.2.1 | None | ERR2600463 | MDR-TB | lineage2.2.1 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864890 | MDR-TB | lineage2.2.1 | None | ERR2600448 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831404 | XDR-TB | lineage2.2.1 | de | SRR24256186 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043511 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050135 | Pre-XDR-TB | lineage2.2.1 | None | ERR11069124 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832440 | MDR-TB | lineage2.2.1 | None | SRR6832755 | MDR-TB | lineage2.2.1 | None | SRR24256174 | Pre-XDR-TB | lineage2.2.1 | None | SRR1577806 | MDR-TB | lineage2.2.1 | None | SRR29539775 | MDR-TB | lineage2.2.1 | None | ERR4276868 | XDR-TB | lineage2.2.1 | None | ERR5865799 | MDR-TB | lineage2.2.1 | None | ERR7362020 | MDR-TB | lineage2.2.1 | None | SRR29539418 | MDR-TB | lineage2.2.1 | None | ERR2307634 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865872 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801310 | MDR-TB | lineage2.2.1 | None | ERR13284412 | MDR-TB | lineage2.2.1 | None | SRR29539770 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865964 | MDR-TB | lineage2.2.1 | None | SRR13232697 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276181 | XDR-TB | lineage2.2.1 | None | SRR29538972 | MDR-TB | lineage2.2.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR552127 | MDR-TB | lineage2.2.1 | None | ERR551162 | MDR-TB | lineage2.2.1 | None | ERR4011120 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284763 | MDR-TB | lineage2.2.1 | None | ERR13284547 | MDR-TB | lineage2.2.1 | None | SRR24256366 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866313 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831732 | MDR-TB | lineage2.2.1 | None | SRR29681306 | MDR-TB | lineage2.2.1 | None | SRR29539159 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276259 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715081 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600600 | MDR-TB | lineage2.2.1 | None | ERR13275898 | MDR-TB | lineage2.2.1 | None | ERR10748561 | MDR-TB | lineage2.2.2 | None | ERR13284319 | MDR-TB | lineage2.2.1 | None | ERR5866011 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232456 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR11774907 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088336 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256129 | MDR-TB | lineage2.2.1 | None | ERR11773816 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917982 | MDR-TB | lineage2.2.2 | za | ERR4828783 | MDR-TB | lineage2.2.1 | None | SRR7755709 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610064 | MDR-TB | lineage2.2.2 | None | SRR7516404 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677418 | Pre-XDR-TB | lineage2.2.1 | de | ERR2517047 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2307369 | MDR-TB | lineage2.2.1 | None | ERR2600583 | Pre-XDR-TB | lineage2.2.1 | None | ERR11042969 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639746 | MDR-TB | lineage2.2.1 | None | ERR13284750 | MDR-TB | lineage2.2.1 | None | DRR184906 | MDR-TB | lineage2.2.1 | vn | ERR2600464 | MDR-TB | lineage2.2.1 | None | SRR7516405 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289272 | MDR-TB | lineage2.2.2 | None | ERR13285736 | MDR-TB | lineage2.2.1 | None | SRR29539121 | MDR-TB | lineage2.2.1 | None | ERR553027 | MDR-TB | lineage2.2.1 | None | ERR4830165 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993193 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992997 | XDR-TB | lineage2.2.2 | None | ERR9992801 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515705 | MDR-TB | lineage2.2.2 | za | SRR24709926 | MDR-TB | lineage2.2.1 | None | SRR24255914 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992797 | XDR-TB | lineage2.2.2 | None | ERR5866311 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992900 | XDR-TB | lineage2.2.2 | None | SRR24255950 | MDR-TB | lineage2.2.1 | None | ERR4276867 | XDR-TB | lineage2.2.1 | None | SRR13232458 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR13285817 | MDR-TB | lineage2.2.1 | None | ERR13276383 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681408 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831816 | MDR-TB | lineage2.2.1 | None | SRR29539467 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055885 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600593 | MDR-TB | lineage2.2.1 | None | ERR550625 | MDR-TB | lineage2.2.1 | None | ERR5865947 | MDR-TB | lineage2.2.1 | None | ERR5865948 | MDR-TB | lineage2.2.1 | None | SRR24255908 | MDR-TB | lineage2.2.1 | None | ERR5866312 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539814 | MDR-TB | lineage2.2.1 | None | SRR29539077 | MDR-TB | lineage2.2.1 | None | ERR9119820 | MDR-TB | lineage2.2.2 | None | ERR4872274 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866114 | MDR-TB | lineage2.2.1 | None | SRR29539690 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539437 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864889 | MDR-TB | lineage2.2.1 | None | SRR29356662 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257071 | Pre-XDR-TB | lineage2.2.1 | None | ERR551788 | MDR-TB | lineage2.2.1 | None | SRR29539772 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865871 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067399 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257006 | MDR-TB | lineage2.2.1 | None | SRR14782520 | Pre-XDR-TB | lineage2.2.1 | None | ERR11774905 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539189 | MDR-TB | lineage2.2.1 | None | SRR5153220 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132076 | MDR-TB | lineage2.2.2 | None | ERR2307774 | MDR-TB | lineage2.2.1 | None | ERR552847 | MDR-TB | lineage2.2.1 | None | ERR2510644 | MDR-TB | lineage3 | pk | SRR18714834 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255949 | MDR-TB | lineage2.2.1 | None | ERR13284088 | MDR-TB | lineage2.2.1 | None | ERR10762279 | MDR-TB | lineage2.2.1 | None | SRR14807627 | XDR-TB | lineage2.2.1 | None | ERR2600584 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284687 | MDR-TB | lineage2.2.1 | None | ERR5864888 | MDR-TB | lineage2.2.1 | None | ERR8665526 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911667 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975826 | MDR-TB | lineage2.2.2 | None | ERR551746 | MDR-TB | lineage2.2.1 | None | SRR29093278 | Pre-XDR-TB | lineage2.2.2 | None | SRR29539328 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748415 | MDR-TB | lineage2.2.2 | None | ERR2307771 | MDR-TB | lineage2.2.1 | None | ERR8665723 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307781 | MDR-TB | lineage2.2.1 | None | SRR16088264 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832171 | Other | lineage2.2.1 | None | SRR24256313 | MDR-TB | lineage2.2.1 | None | ERR12796616 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938605 | MDR-TB | lineage2.2.1 | None | SRR7645907 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR5865946 | MDR-TB | lineage2.2.1 | None | ERR4830898 | MDR-TB | lineage2.2.1 | None | SRR6832829 | MDR-TB | lineage2.2.1 | None | SRR24255883 | MDR-TB | lineage2.2.1 | None | ERR5987373 | MDR-TB | lineage2.2.2 | None | ERR4827893 | MDR-TB | lineage2.2.1 | None | ERR2600586 | MDR-TB | lineage2.2.1 | None | SRR13232657 | MDR-TB | lineage2.2.1 | None | SRR29539438 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062531 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062530 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310922 | HR-TB | lineage2.2.1 | None | SRR10397210 | MDR-TB | lineage2.2.1 | None | ERR13284390 | MDR-TB | lineage2.2.1 | None | SRR29539454 | Pre-XDR-TB | lineage2.2.1 | None | ERR9027228 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256093 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975649 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975659 | MDR-TB | lineage2.2.1 | None | ERR10762253 | MDR-TB | lineage2.2.1 | None | SRR29539069 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715077 | MDR-TB | lineage2.2.1 | None | SRR3675220 | Pre-XDR-TB | lineage2.2.1 | None | SRR7781500 | MDR-TB | lineage2.2.1 | None | SRR24255938 | XDR-TB | lineage2.2.1 | None | ERR11798528 | MDR-TB | lineage2.2.1 | None | ERR11043690 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307785 | MDR-TB | lineage2.2.1 | None | SRR29539679 | MDR-TB | lineage2.2.1 | None | SRR29681254 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284424 | MDR-TB | lineage2.2.1 | None | SRR5153864 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043701 | MDR-TB | lineage2.2.1 | None | SRR29681326 | MDR-TB | lineage2.2.1 | None | ERR9806685 | MDR-TB | lineage2.2.2 | None | ERR4830152 | Pre-XDR-TB | lineage2.2.1 | tj |
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