Rv2043c - p.Ile5Ser
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
62 MDR-TB
196 Pre-XDR-TB
36 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 249 |
| lineage1.1.2;lineage2.2.1 | 3 |
| lineage2.2.1;lineage3.1.2 | 3 |
| lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage2.2.1.1;lineage3;lineage4 | 2 |
| lineage4.4 | 5 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1;lineage3 | 7 |
| lineage1.2.2.2;lineage2.2.1 | 3 |
| lineage4.3.2 | 2 |
| lineage4 | 4 |
| lineage4.3.3 | 4 |
| lineage2.2.1;lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.8 | 2 |
| lineage1.2.2.2;lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1 | 1 |
| lineage1.1.1;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 296 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13266500 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261997 | Pre-XDR-TB | lineage2.2.1 | None | SRR067505 | MDR-TB | lineage2.2.1 | None | SRR28351520 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798728 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798875 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799379 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799900 | Pre-XDR-TB | lineage2.2.1 | in | SRR25206890 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175187 | XDR-TB | lineage1.1.2;lineage2.2.1 | None | ERR4799875 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175239 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | ERR4797111 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827503 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797432 | MDR-TB | lineage2.2.1 | in | SRR22424726 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799082 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800212 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827744 | Pre-XDR-TB | lineage1.1.3.1;lineage2.2.1 | None | SRR25827717 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4 | None | ERR4798291 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800580 | MDR-TB | lineage2.2.1 | in | ERR502939 | MDR-TB | lineage4.4 | None | ERR4830661 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049819 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798045 | Pre-XDR-TB | lineage2.2.1 | in | ERR2179669 | MDR-TB | lineage4.4 | cn | SRR25827435 | XDR-TB | lineage2.2.1.1 | None | ERR4799229 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798479 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266540 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267071 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800332 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798564 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175191 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827350 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4799902 | MDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR25827884 | XDR-TB | lineage2.2.1 | None | ERR13266857 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266934 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831014 | Pre-XDR-TB | lineage2.2.1 | np | ERR11044053 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799471 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830952 | Pre-XDR-TB | lineage2.2.1 | np | ERR4798065 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798509 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | in | ERR4799001 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800524 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175208 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732689 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045927 | XDR-TB | lineage2.2.1 | None | SRR28351359 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799139 | MDR-TB | lineage2.2.1 | in | ERR13290868 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797579 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827397 | XDR-TB | lineage2.2.1 | None | SRR25827704 | XDR-TB | lineage2.2.1 | None | ERR13260172 | MDR-TB | lineage4.3.2 | None | ERR4796973 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175257 | MDR-TB | lineage2.2.1 | None | ERR4797213 | Pre-XDR-TB | lineage2.2.1 | in | ERR4812372 | MDR-TB | lineage4 | pe | ERR13266451 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710243 | Pre-XDR-TB | lineage4.3.3 | None | ERR4799416 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800557 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2 | in | ERR13266145 | XDR-TB | lineage2.2.1 | None | ERR4553568 | MDR-TB | lineage4 | None | ERR4797858 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799309 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800619 | MDR-TB | lineage2.2.1 | None | SRR11662672 | MDR-TB | lineage2.2.1 | None | SRR25827351 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1.3 | None | ERR4799830 | XDR-TB | lineage2.2.1 | in | ERR4796938 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796375 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266484 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798376 | Pre-XDR-TB | lineage2.2.1 | in | ERR5866310 | MDR-TB | lineage2.2.1 | None | ERR4800471 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830977 | Pre-XDR-TB | lineage2.2.1 | np | SRR25827436 | MDR-TB | lineage2.2.1 | None | ERR4799385 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798497 | Pre-XDR-TB | lineage2.2.1 | in | ERR13284202 | Pre-XDR-TB | lineage4.3.3 | None | ERR4797334 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796761 | MDR-TB | lineage2.2.1 | in | SRR067565 | MDR-TB | lineage2.2.1 | None | ERR4798453 | MDR-TB | lineage2.2.1 | in | ERR4798811 | Pre-XDR-TB | lineage2.2.1 | in | ERR11082557 | Pre-XDR-TB | lineage4.3.3 | None | SRR22175193 | XDR-TB | lineage2.2.1 | None | ERR4798396 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798243 | XDR-TB | lineage2.2.1 | in | ERR4800431 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911389 | MDR-TB | lineage2.2.1 | us | ERR4797384 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827482 | XDR-TB | lineage2.2.1 | None | ERR4799158 | Pre-XDR-TB | lineage2.2.1 | in | ERR11082679 | MDR-TB | lineage2.2.1 | None | ERR4799187 | Pre-XDR-TB | lineage2.2.1 | in | SRR16088327 | MDR-TB | lineage2.2.1 | None | ERR4797704 | MDR-TB | lineage2.2.1 | in | ERR4798604 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798383 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827487 | XDR-TB | lineage2.2.1;lineage3 | None | ERR4830961 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831001 | Pre-XDR-TB | lineage2.2.1 | np | ERR4798349 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799870 | MDR-TB | lineage2.2.1 | in | ERR4797971 | XDR-TB | lineage2.2.1 | in | SRR24710033 | MDR-TB | lineage2.2.1 | None | SRR069928 | MDR-TB | lineage2.2.1 | None | ERR4798762 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796525 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799219 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798292 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799239 | MDR-TB | lineage2.2.1 | in | ERR4799285 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799288 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827769 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR4797712 | Pre-XDR-TB | lineage2.2.1 | in | ERR8774376 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798806 | MDR-TB | lineage2.2.1 | in | ERR4799432 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797539 | MDR-TB | lineage2.2.1 | in | ERR4798617 | XDR-TB | lineage2.2.1 | in | ERR4799330 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799335 | Pre-XDR-TB | lineage2.2.1 | in | SRR28351230 | Pre-XDR-TB | lineage2.2.1 | None | SRR069942 | MDR-TB | lineage2.2.1 | None | ERR4796514 | MDR-TB | lineage2.2.1 | in | SRR29772556 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799654 | MDR-TB | lineage2.2.1 | in | ERR4800293 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827490 | XDR-TB | lineage2.2.1 | None | ERR4799218 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797095 | Other | lineage2.2.1 | in | ERR4797501 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799152 | MDR-TB | lineage2.2.1 | in | SRR25827643 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR28351272 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045543 | MDR-TB | lineage2.2.1 | None | ERR4797003 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797015 | Pre-XDR-TB | lineage2.2.1 | in | ERR3639726 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830662 | Pre-XDR-TB | lineage2.2.1 | np | SRR1723998 | MDR-TB | lineage4.4 | cn | ERR4798759 | MDR-TB | lineage2.2.1 | in | ERR4796276 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827510 | XDR-TB | lineage2.2.1.2 | None | SRR29016881 | MDR-TB | lineage4 | None | ERR1873451 | Pre-XDR-TB | lineage2.2.1 | za | SRR25827740 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4 | None | ERR4800441 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800276 | Pre-XDR-TB | lineage2.2.1 | in | ERR11773812 | MDR-TB | lineage2.2.1 | None | ERR4796698 | MDR-TB | lineage2.2.1 | in | ERR4799093 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799448 | XDR-TB | lineage2.2.1 | in | ERR13266931 | MDR-TB | lineage2.2.1 | None | ERR13266996 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799290 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175197 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799216 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796722 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797710 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827601 | XDR-TB | lineage2.2.1.1 | None | SRR6356930 | Pre-XDR-TB | lineage4.8 | None | SRR28351362 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798605 | XDR-TB | lineage2.2.1 | in | SRR8380939 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827632 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | None | ERR13266859 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799909 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830954 | Pre-XDR-TB | lineage2.2.1 | np | SRR6824524 | MDR-TB | lineage4.4 | cn | SRR10305983 | MDR-TB | lineage4.4 | None | ERR4799338 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827488 | MDR-TB | lineage1.2.2.2;lineage4.3.3 | None | SRR26937125 | MDR-TB | lineage2.2.1 | None | ERR4799988 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827764 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266598 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175203 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796589 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798804 | Pre-XDR-TB | lineage2.2.1 | in | ERR13262062 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262157 | Pre-XDR-TB | lineage2.2.1 | None | ERR13281474 | MDR-TB | lineage2.2.1 | None | ERR4799637 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799681 | XDR-TB | lineage2.2.1 | in | ERR4796793 | Pre-XDR-TB | lineage2.2.1 | in | ERR13260968 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798668 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796999 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797697 | MDR-TB | lineage2.2.1 | in | ERR4798208 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799647 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830953 | Pre-XDR-TB | lineage2.2.1 | np | ERR4800599 | XDR-TB | lineage2.2.1 | in | SRR25827661 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR28351283 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR13284034 | MDR-TB | lineage2.2.1 | None | SRR069988 | MDR-TB | lineage2.2.1 | None | SRR25827370 | MDR-TB | lineage2.2.1;lineage3 | None | ERR4796794 | MDR-TB | lineage2.2.1 | in | ERR4799789 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799361 | Pre-XDR-TB | lineage2.2.1 | in | SRR22424853 | MDR-TB | lineage2.2.1 | None | SRR25827299 | MDR-TB | lineage2.2.1 | None | ERR4799694 | Pre-XDR-TB | lineage2.2.1 | in | SRR9738500 | MDR-TB | lineage4.2.1 | None | ERR4831614 | MDR-TB | lineage2.2.1 | vn | ERR13261342 | MDR-TB | lineage2.2.1 | None | ERR4796884 | MDR-TB | lineage2.2.1 | in | ERR4800267 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796894 | XDR-TB | lineage2.2.1 | in | SRR22175247 | XDR-TB | lineage2.2.1 | None | SRR28351319 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796702 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796746 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796984 | Pre-XDR-TB | lineage2.2.1 | in | SRR067539 | MDR-TB | lineage2.2.1 | None | SRR28351432 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045908 | XDR-TB | lineage2.2.1 | None | ERR13266665 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266981 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351485 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045949 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351354 | XDR-TB | lineage2.2.1 | None | SRR28409566 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827446 | XDR-TB | lineage2.2.1 | None | SRR28045562 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351615 | Pre-XDR-TB | lineage2.2.1 | None | SRR22461705 | Pre-XDR-TB | lineage4 | None | SRR28045843 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827547 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | ERR13290866 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539662 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772647 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796434 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796939 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797081 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797390 | MDR-TB | lineage2.2.1 | in | SRR25827745 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2.1 | None | ERR13266528 | XDR-TB | lineage2.2.1 | None | ERR13266929 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827479 | XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR25827620 | XDR-TB | lineage2.2.1 | None | SRR28351567 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799674 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800321 | XDR-TB | lineage2.2.1 | in | ERR4799526 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799570 | Pre-XDR-TB | lineage2.2.1;lineage3 | in | ERR13266655 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798622 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799212 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799508 | XDR-TB | lineage2.2.1 | in | ERR4799887 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799945 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827672 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797973 | Pre-XDR-TB | lineage2.2.1 | in | ERR13267048 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797622 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | in | SRR29772588 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772437 | Pre-XDR-TB | lineage2.2.1 | None | SRR8351921 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356936 | Pre-XDR-TB | lineage4.8 | None | SRR25827550 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1 | None | ERR11049830 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796335 | Pre-XDR-TB | lineage2.2.1 | in | ERR11043686 | MDR-TB | lineage2.2.1 | None | SRR29772692 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798457 | XDR-TB | lineage2.2.1 | in | ERR4830913 | Pre-XDR-TB | lineage2.2.1 | np | ERR4799958 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261150 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866308 | MDR-TB | lineage2.2.1 | None | ERR4813657 | MDR-TB | lineage4.3.2 | None | ERR4831634 | HR-TB | lineage1.1.1;lineage2.2.1 | vn | SRR22424728 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732571 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262037 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827677 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827538 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261226 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800504 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797896 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797549 | MDR-TB | lineage2.2.1 | in | SRR28351159 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266747 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262011 | XDR-TB | lineage2.2.1 | None | SRR28045569 | MDR-TB | lineage2.2.1 | None | ERR4799363 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827886 | Pre-XDR-TB | lineage2.2.1;lineage3 | None |
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