Rv2043c - p.Ile5Ser


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
0 Sensitive 0 RR-TB 1 HR-TB 67 MDR-TB 217 Pre-XDR-TB 38 XDR-TB 1 Other
lineage Counts
lineage Count
lineage1.2.2.2;lineage4.3.3 1
lineage2.2.1 275
lineage4.4 5
lineage4.3.3 4
lineage2.2.1;lineage3.1.2 3
lineage1.1.3.1;lineage2.2.1 1
lineage1.2.2.2;lineage2.2.1 4
lineage2.2.1;lineage3 7
lineage2.2.1;lineage4.5 1
lineage4 4
lineage1.1;lineage2.2.1 1
lineage2.2.1;lineage3.1.2.1 1
lineage4.8 2
lineage1.1.2;lineage2.2.1;lineage3.1 1
lineage1.1.2;lineage2.2.1 3
lineage4.3.2 2
lineage2.2.1.1;lineage3;lineage4 2
lineage2.2.1;lineage4.1.1.3 1
lineage2.2.1;lineage4 1
lineage2.2.1.1 2
lineage4.2.1 1
lineage2.2.1;lineage4.1.2 1
lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 324
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR25827488 MDR-TB lineage1.2.2.2;lineage4.3.3 None
SRR26937125 MDR-TB lineage2.2.1 None
SRR28045569 MDR-TB lineage2.2.1 None
SRR067565 MDR-TB lineage2.2.1 None
ERR13262062 Pre-XDR-TB lineage2.2.1 None
SRR22175193 XDR-TB lineage2.2.1 None
SRR1723998 MDR-TB lineage4.4 cn
ERR13266504 Pre-XDR-TB lineage2.2.1 None
ERR13260968 Pre-XDR-TB lineage2.2.1 None
ERR13284202 Pre-XDR-TB lineage4.3.3 None
SRR25827482 XDR-TB lineage2.2.1 None
ERR4798668 Pre-XDR-TB lineage2.2.1 None
ERR13266862 Pre-XDR-TB lineage2.2.1 None
SRR11662318 MDR-TB lineage2.2.1 None
ERR13266859 Pre-XDR-TB lineage2.2.1 None
ERR13266934 Pre-XDR-TB lineage2.2.1 None
SRR22175239 XDR-TB lineage2.2.1;lineage3.1.2 None
SRR22424726 Pre-XDR-TB lineage2.2.1 None
SRR25827744 Pre-XDR-TB lineage1.1.3.1;lineage2.2.1 None
SRR28351283 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1 None
SRR069928 MDR-TB lineage2.2.1 None
ERR13261499 Pre-XDR-TB lineage2.2.1 None
SRR22175191 Pre-XDR-TB lineage2.2.1 None
SRR25827299 MDR-TB lineage2.2.1 None
SRR25827350 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR13261978 Pre-XDR-TB lineage2.2.1 None
SRR25827769 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR4797095 Other lineage2.2.1 in
ERR4797081 Pre-XDR-TB lineage2.2.1 in
ERR4796589 Pre-XDR-TB lineage2.2.1 in
ERR4797390 MDR-TB lineage2.2.1 in
ERR4797579 Pre-XDR-TB lineage2.2.1 in
ERR4797710 Pre-XDR-TB lineage2.2.1 in
ERR4796794 MDR-TB lineage2.2.1 in
ERR4796884 MDR-TB lineage2.2.1 in
ERR4796939 Pre-XDR-TB lineage2.2.1 in
ERR4797015 Pre-XDR-TB lineage2.2.1 in
ERR4798349 Pre-XDR-TB lineage2.2.1 in
ERR4798762 Pre-XDR-TB lineage2.2.1 in
ERR4798804 Pre-XDR-TB lineage2.2.1 in
ERR4797213 Pre-XDR-TB lineage2.2.1 in
ERR4800267 Pre-XDR-TB lineage2.2.1 in
ERR4800441 Pre-XDR-TB lineage2.2.1 in
ERR4798564 Pre-XDR-TB lineage2.2.1 in
ERR4800580 MDR-TB lineage2.2.1 in
ERR4797084 Pre-XDR-TB lineage2.2.1 in
ERR4799139 MDR-TB lineage2.2.1 in
ERR4799219 Pre-XDR-TB lineage2.2.1 in
ERR4799216 Pre-XDR-TB lineage2.2.1 in
ERR4799229 Pre-XDR-TB lineage2.2.1 in
ERR4799338 Pre-XDR-TB lineage2.2.1 in
ERR4799335 Pre-XDR-TB lineage2.2.1 in
ERR4799361 Pre-XDR-TB lineage2.2.1 in
ERR4797334 Pre-XDR-TB lineage2.2.1 in
ERR4799654 MDR-TB lineage2.2.1 in
ERR4799637 Pre-XDR-TB lineage2.2.1 in
ERR4797549 MDR-TB lineage2.2.1 in
ERR4799001 Pre-XDR-TB lineage2.2.1 in
ERR13266506 XDR-TB lineage2.2.1 None
ERR4797697 MDR-TB lineage2.2.1 in
ERR4797712 Pre-XDR-TB lineage2.2.1 in
ERR4798208 Pre-XDR-TB lineage2.2.1 in
ERR4799285 Pre-XDR-TB lineage2.2.1 in
ERR4799288 Pre-XDR-TB lineage2.2.1 in
ERR4798383 Pre-XDR-TB lineage2.2.1 in
ERR4799330 Pre-XDR-TB lineage2.2.1 in
ERR4799363 Pre-XDR-TB lineage2.2.1 in
ERR4796335 Pre-XDR-TB lineage2.2.1 in
ERR4796434 Pre-XDR-TB lineage2.2.1 in
ERR4796514 MDR-TB lineage2.2.1 in
ERR4799887 Pre-XDR-TB lineage2.2.1 in
ERR4798605 XDR-TB lineage2.2.1 in
ERR4796746 Pre-XDR-TB lineage2.2.1 in
ERR4796793 Pre-XDR-TB lineage2.2.1 in
ERR4796973 Pre-XDR-TB lineage2.2.1 in
ERR4798759 MDR-TB lineage2.2.1 in
ERR13262037 Pre-XDR-TB lineage2.2.1 None
ERR4798811 Pre-XDR-TB lineage2.2.1 in
ERR4800212 Pre-XDR-TB lineage2.2.1 in
ERR4800599 XDR-TB lineage2.2.1 in
ERR13290866 Pre-XDR-TB lineage2.2.1 None
SRR29772556 Pre-XDR-TB lineage2.2.1 None
ERR13262080 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1 None
SRR28351319 Pre-XDR-TB lineage2.2.1 None
SRR8380939 Pre-XDR-TB lineage2.2.1 in
SRR21732689 Pre-XDR-TB lineage2.2.1 None
SRR28351272 Pre-XDR-TB lineage2.2.1 None
SRR28045927 XDR-TB lineage2.2.1 None
SRR28045949 Pre-XDR-TB lineage2.2.1 None
ERR4830953 Pre-XDR-TB lineage2.2.1 np
ERR4830954 Pre-XDR-TB lineage2.2.1 np
SRR28351615 Pre-XDR-TB lineage2.2.1 None
SRR22461705 Pre-XDR-TB lineage4 None
SRR28351359 Pre-XDR-TB lineage2.2.1 None
SRR28045843 Pre-XDR-TB lineage2.2.1 None
ERR4830952 Pre-XDR-TB lineage2.2.1 np
ERR4830961 Pre-XDR-TB lineage2.2.1 np
ERR4831014 Pre-XDR-TB lineage2.2.1 np
ERR4831614 MDR-TB lineage2.2.1 vn
ERR4831634 HR-TB lineage1.1;lineage2.2.1 vn
SRR25827745 Pre-XDR-TB lineage2.2.1;lineage3.1.2.1 None
SRR25827704 XDR-TB lineage2.2.1 None
SRR28351567 Pre-XDR-TB lineage2.2.1 None
ERR1873451 Pre-XDR-TB lineage2.2.1 za
SRR6824524 MDR-TB lineage4.4 cn
ERR13266655 Pre-XDR-TB lineage2.2.1 None
SRR25827672 Pre-XDR-TB lineage2.2.1 None
SRR29016881 MDR-TB lineage4 None
ERR13266145 XDR-TB lineage2.2.1 None
SRR11662672 MDR-TB lineage2.2.1 None
SRR6356936 Pre-XDR-TB lineage4.8 None
SRR25827550 XDR-TB lineage1.1.2;lineage2.2.1;lineage3.1 None
ERR11049830 Pre-XDR-TB lineage2.2.1 None
ERR11043686 MDR-TB lineage2.2.1 None
ERR13266931 MDR-TB lineage2.2.1 None
ERR13266996 Pre-XDR-TB lineage2.2.1 None
ERR13261150 Pre-XDR-TB lineage2.2.1 None
ERR13266484 Pre-XDR-TB lineage2.2.1 None
ERR5866308 MDR-TB lineage2.2.1 None
ERR4797503 Pre-XDR-TB lineage2.2.1 in
ERR4797622 Pre-XDR-TB lineage1.1.2;lineage2.2.1 in
ERR4797971 XDR-TB lineage2.2.1 in
ERR4813657 MDR-TB lineage4.3.2 None
ERR4798617 XDR-TB lineage2.2.1 in
ERR4799508 XDR-TB lineage2.2.1 in
ERR4799900 Pre-XDR-TB lineage2.2.1 in
SRR21732571 Pre-XDR-TB lineage2.2.1 None
SRR25827632 Pre-XDR-TB lineage1.1.2;lineage2.2.1 None
SRR28351159 Pre-XDR-TB lineage2.2.1 None
ERR13266747 Pre-XDR-TB lineage2.2.1 None
SRR10305983 MDR-TB lineage4.4 None
ERR13262011 XDR-TB lineage2.2.1 None
ERR11082557 Pre-XDR-TB lineage4.3.3 None
ERR13266978 MDR-TB lineage2.2.1 None
SRR22175203 Pre-XDR-TB lineage2.2.1 None
ERR13267048 Pre-XDR-TB lineage2.2.1 None
ERR13266718 MDR-TB lineage2.2.1 None
ERR13261997 Pre-XDR-TB lineage2.2.1 None
ERR13261101 Pre-XDR-TB lineage2.2.1 None
SRR067505 MDR-TB lineage2.2.1 None
SRR28351520 Pre-XDR-TB lineage2.2.1 None
SRR25206890 Pre-XDR-TB lineage2.2.1 None
ERR11082679 MDR-TB lineage2.2.1 None
ERR13266598 Pre-XDR-TB lineage2.2.1 None
ERR13262157 Pre-XDR-TB lineage2.2.1 None
SRR25827661 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR29772692 Pre-XDR-TB lineage2.2.1 None
SRR16088327 MDR-TB lineage2.2.1 None
ERR13261342 MDR-TB lineage2.2.1 None
SRR25827503 Pre-XDR-TB lineage2.2.1 None
ERR13267071 Pre-XDR-TB lineage2.2.1 None
SRR25827717 Pre-XDR-TB lineage2.2.1.1;lineage3;lineage4 None
ERR11049819 Pre-XDR-TB lineage2.2.1 None
ERR13262116 Pre-XDR-TB lineage2.2.1 None
ERR13284034 MDR-TB lineage2.2.1 None
ERR13262020 XDR-TB lineage2.2.1 None
SRR24710033 MDR-TB lineage2.2.1 None
SRR25827764 Pre-XDR-TB lineage2.2.1 None
SRR25827351 Pre-XDR-TB lineage2.2.1;lineage4.1.1.3 None
SRR25827397 XDR-TB lineage2.2.1 None
SRR25827370 MDR-TB lineage2.2.1;lineage3 None
ERR13261395 Pre-XDR-TB lineage2.2.1 None
ERR4799789 Pre-XDR-TB lineage2.2.1 None
ERR13262002 Pre-XDR-TB lineage2.2.1 None
ERR13267085 Pre-XDR-TB lineage2.2.1 None
ERR13281474 MDR-TB lineage2.2.1 None
ERR4799902 MDR-TB lineage1.2.2.2;lineage2.2.1 None
SRR25827884 XDR-TB lineage2.2.1 None
ERR4798622 Pre-XDR-TB lineage2.2.1 in
ERR8774376 Pre-XDR-TB lineage2.2.1 None
ERR4797973 Pre-XDR-TB lineage2.2.1 in
ERR4796375 Pre-XDR-TB lineage2.2.1 in
ERR4796525 Pre-XDR-TB lineage2.2.1 in
ERR4796722 Pre-XDR-TB lineage2.2.1 in
ERR4796761 MDR-TB lineage2.2.1 in
ERR4796938 Pre-XDR-TB lineage2.2.1 in
ERR4799945 Pre-XDR-TB lineage2.2.1 in
ERR4799988 Pre-XDR-TB lineage2.2.1;lineage4 in
ERR4798857 Pre-XDR-TB lineage2.2.1 in
ERR4797858 Pre-XDR-TB lineage2.2.1 in
ERR4799082 Pre-XDR-TB lineage2.2.1 in
ERR4799152 MDR-TB lineage2.2.1 in
ERR4799385 Pre-XDR-TB lineage2.2.1 in
ERR4799526 Pre-XDR-TB lineage2.2.1 in
ERR4799570 Pre-XDR-TB lineage2.2.1;lineage3 in
ERR4799093 Pre-XDR-TB lineage2.2.1 in
SRR28351230 Pre-XDR-TB lineage2.2.1 None
ERR4797896 Pre-XDR-TB lineage2.2.1 in
ERR4796702 Pre-XDR-TB lineage2.2.1 in
ERR4796698 MDR-TB lineage2.2.1 in
ERR4799909 Pre-XDR-TB lineage2.2.1 in
ERR4796984 Pre-XDR-TB lineage2.2.1 in
SRR22175247 XDR-TB lineage2.2.1 None
ERR4798806 MDR-TB lineage2.2.1 in
ERR4812372 MDR-TB lineage4 pe
SRR28351432 Pre-XDR-TB lineage2.2.1 None
SRR28045543 MDR-TB lineage2.2.1 None
SRR28045908 XDR-TB lineage2.2.1 None
SRR28351485 Pre-XDR-TB lineage2.2.1 None
SRR25827547 XDR-TB lineage2.2.1;lineage3.1.2 None
ERR3639726 Pre-XDR-TB lineage4.3.3 None
SRR29772588 Pre-XDR-TB lineage2.2.1 None
ERR4553568 MDR-TB lineage4 None
SRR25827740 Pre-XDR-TB lineage2.2.1.1;lineage3;lineage4 None
ERR11773812 MDR-TB lineage2.2.1 None
ERR4799958 Pre-XDR-TB lineage2.2.1 None
ERR4797003 Pre-XDR-TB lineage2.2.1 in
ERR4796894 XDR-TB lineage2.2.1 in
ERR5866310 MDR-TB lineage2.2.1 None
ERR4798292 Pre-XDR-TB lineage2.2.1 in
ERR4798243 XDR-TB lineage2.2.1 in
ERR4798875 Pre-XDR-TB lineage2.2.1 in
ERR4799830 XDR-TB lineage2.2.1 in
ERR4800471 Pre-XDR-TB lineage2.2.1 in
ERR4799379 Pre-XDR-TB lineage2.2.1 in
ERR4799681 XDR-TB lineage2.2.1 in
ERR4800293 Pre-XDR-TB lineage2.2.1 in
SRR22175197 Pre-XDR-TB lineage2.2.1 None
SRR25827601 XDR-TB lineage2.2.1.1 None
SRR25827677 Pre-XDR-TB lineage2.2.1 None
SRR6356930 Pre-XDR-TB lineage4.8 None
ERR13261226 Pre-XDR-TB lineage2.2.1 None
ERR2179669 MDR-TB lineage4.4 cn
ERR4797704 MDR-TB lineage2.2.1 in
ERR13267110 Pre-XDR-TB lineage2.2.1 None
ERR13266649 Pre-XDR-TB lineage2.2.1 None
ERR13290868 Pre-XDR-TB lineage2.2.1 None
SRR25827886 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR13261975 Pre-XDR-TB lineage2.2.1 None
ERR13266528 XDR-TB lineage2.2.1 None
ERR13266665 Pre-XDR-TB lineage2.2.1 None
ERR13266500 Pre-XDR-TB lineage2.2.1 None
ERR13266540 Pre-XDR-TB lineage2.2.1 None
ERR13266667 Pre-XDR-TB lineage2.2.1 None
SRR29231505 Pre-XDR-TB lineage2.2.1 None
ERR13260172 MDR-TB lineage4.3.2 None
SRR22175187 XDR-TB lineage1.1.2;lineage2.2.1 None
ERR5866309 MDR-TB lineage2.2.1 None
SRR25827487 XDR-TB lineage2.2.1;lineage3 None
ERR13266754 MDR-TB lineage2.2.1 None
ERR13266929 Pre-XDR-TB lineage2.2.1 None
SRR069988 MDR-TB lineage2.2.1 None
ERR13266858 Pre-XDR-TB lineage2.2.1 None
SRR25827435 XDR-TB lineage2.2.1.1 None
ERR13266857 Pre-XDR-TB lineage2.2.1 None
SRR29539662 Pre-XDR-TB lineage2.2.1 None
SRR22424853 MDR-TB lineage2.2.1 None
SRR9738500 MDR-TB lineage4.2.1 None
SRR29772437 Pre-XDR-TB lineage2.2.1 None
ERR13266477 Pre-XDR-TB lineage2.2.1 None
ERR13266981 Pre-XDR-TB lineage2.2.1 None
ERR4800557 Pre-XDR-TB lineage2.2.1;lineage4.1.2 in
ERR4798728 Pre-XDR-TB lineage2.2.1 in
ERR4797432 MDR-TB lineage2.2.1 in
ERR4796999 Pre-XDR-TB lineage2.2.1 in
ERR4798291 Pre-XDR-TB lineage2.2.1 in
ERR4798396 Pre-XDR-TB lineage2.2.1 in
ERR4798509 Pre-XDR-TB lineage2.2.1;lineage3.1.2 in
ERR4798497 Pre-XDR-TB lineage2.2.1 in
ERR4799212 Pre-XDR-TB lineage2.2.1 in
ERR4799187 Pre-XDR-TB lineage2.2.1 in
ERR4798457 XDR-TB lineage2.2.1 in
ERR4797384 Pre-XDR-TB lineage2.2.1 in
SRR29772647 Pre-XDR-TB lineage2.2.1 None
ERR4799239 MDR-TB lineage2.2.1 in
ERR4799290 Pre-XDR-TB lineage2.2.1 in
ERR4799416 Pre-XDR-TB lineage2.2.1 in
ERR4799432 Pre-XDR-TB lineage2.2.1 in
ERR4799448 XDR-TB lineage2.2.1 in
ERR4799471 Pre-XDR-TB lineage2.2.1 in
ERR4797501 Pre-XDR-TB lineage2.2.1 in
ERR4799647 Pre-XDR-TB lineage2.2.1 in
ERR4797539 MDR-TB lineage2.2.1 in
ERR4799674 Pre-XDR-TB lineage2.2.1 in
ERR4799694 Pre-XDR-TB lineage2.2.1 in
ERR4798479 Pre-XDR-TB lineage2.2.1 in
ERR4799870 MDR-TB lineage2.2.1 in
SRR069942 MDR-TB lineage2.2.1 None
ERR4799158 Pre-XDR-TB lineage2.2.1 in
ERR4800276 Pre-XDR-TB lineage2.2.1 in
ERR4800287 Pre-XDR-TB lineage2.2.1 in
ERR4800321 XDR-TB lineage2.2.1 in
ERR4800332 Pre-XDR-TB lineage2.2.1 in
ERR4799218 Pre-XDR-TB lineage2.2.1 in
ERR4800431 Pre-XDR-TB lineage2.2.1 in
ERR4798065 Pre-XDR-TB lineage2.2.1 in
ERR4798045 Pre-XDR-TB lineage2.2.1 in
ERR4800504 Pre-XDR-TB lineage2.2.1 in
ERR4800524 Pre-XDR-TB lineage2.2.1 in
ERR11044053 Pre-XDR-TB lineage2.2.1 None
ERR4799875 Pre-XDR-TB lineage2.2.1 in
ERR4799309 Pre-XDR-TB lineage2.2.1 in
ERR4798376 Pre-XDR-TB lineage2.2.1 in
ERR4798453 MDR-TB lineage2.2.1 in
ERR4798604 Pre-XDR-TB lineage2.2.1 in
SRR25827490 XDR-TB lineage2.2.1 None
SRR067539 MDR-TB lineage2.2.1 None
SRR22175208 Pre-XDR-TB lineage2.2.1 None
SRR25827643 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR28351354 XDR-TB lineage2.2.1 None
SRR28409566 Pre-XDR-TB lineage2.2.1 None
SRR25827446 XDR-TB lineage2.2.1 None
SRR28045562 Pre-XDR-TB lineage2.2.1 None
ERR7911389 MDR-TB lineage2.2.1 us
ERR4830661 Pre-XDR-TB lineage2.2.1 None
ERR4830662 Pre-XDR-TB lineage2.2.1 np
ERR4830913 Pre-XDR-TB lineage2.2.1 np
ERR4830977 Pre-XDR-TB lineage2.2.1 np
ERR4831001 Pre-XDR-TB lineage2.2.1 np
ERR502939 MDR-TB lineage4.4 None
SRR25827479 XDR-TB lineage1.2.2.2;lineage2.2.1 None
SRR25827620 XDR-TB lineage2.2.1 None
SRR22175257 MDR-TB lineage2.2.1 None
ERR4796276 Pre-XDR-TB lineage2.2.1 None
SRR25827510 XDR-TB lineage2.2.1.2 None
ERR13266451 Pre-XDR-TB lineage2.2.1 None
SRR24710243 Pre-XDR-TB lineage4.3.3 None
ERR4800619 MDR-TB lineage2.2.1 None
SRR8351921 Pre-XDR-TB lineage2.2.1 None
ERR4797111 Pre-XDR-TB lineage2.2.1 in
SRR25827436 MDR-TB lineage2.2.1 None
SRR22424728 Pre-XDR-TB lineage2.2.1 None
SRR28351362 Pre-XDR-TB lineage2.2.1 None
SRR25827538 Pre-XDR-TB lineage2.2.1 None