lineage | Count |
---|---|
lineage2.2.1 | 32 |
lineage4.3.4.2 | 42 |
lineage3 | 2 |
lineage4.2.1 | 1 |
lineage4.3.3 | 5 |
lineage4.8 | 1 |
lineage1.2.2.2;lineage3 | 1 |
lineage1.2.2.2;lineage2.2.1 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 87 |
ID | Drug resistance | Lineage | Country iso2 | SRR070034 | MDR-TB | lineage2.2.1 | None | ERR6865980 | MDR-TB | lineage4.3.4.2 | None | ERR6866333 | MDR-TB | lineage4.3.4.2 | None | SRR28393308 | MDR-TB | lineage4.3.4.2 | None | ERR845937 | MDR-TB | lineage4.3.4.2 | pe | ERR8665946 | Pre-XDR-TB | lineage2.2.1 | None | ERR751549 | MDR-TB | lineage4.3.4.2 | pe | SRR25827333 | MDR-TB | lineage3 | None | SRR23311029 | MDR-TB | lineage4.2.1 | None | ERR13284888 | MDR-TB | lineage4.3.3 | None | SRR067550 | MDR-TB | lineage2.2.1 | None | SRR23938696 | XDR-TB | lineage2.2.1 | None | ERR4024759 | MDR-TB | lineage4.3.4.2 | None | ERR4813469 | MDR-TB | lineage4.3.4.2 | pe | ERR6865978 | MDR-TB | lineage4.3.4.2 | None | ERR2510848 | Pre-XDR-TB | lineage2.2.1 | it | SRR21576714 | Pre-XDR-TB | lineage2.2.1 | None | SRR8847006 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043156 | MDR-TB | lineage4.8 | None | SRR16088565 | MDR-TB | lineage2.2.1 | None | ERR2510217 | MDR-TB | lineage4.3.4.2 | pe | SRR25827459 | Pre-XDR-TB | lineage1.2.2.2;lineage3 | None | SRR10380216 | Pre-XDR-TB | lineage4.3.3 | None | ERR4811136 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813630 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR3287573 | MDR-TB | lineage4.3.4.2 | None | SRR28706522 | MDR-TB | lineage2.2.1 | None | SRR8847005 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081902 | MDR-TB | lineage4.3.3 | None | ERR4812752 | MDR-TB | lineage4.3.4.2 | pe | SRR29093897 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR7910871 | MDR-TB | lineage4.3.4.2 | pe | SRR13232682 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024763 | MDR-TB | lineage4.3.4.2 | None | ERR4813554 | MDR-TB | lineage4.3.4.2 | None | ERR2510224 | MDR-TB | lineage4.3.4.2 | pe | ERR8665947 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796443 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR6866863 | MDR-TB | lineage4.3.4.2 | None | ERR8665740 | Pre-XDR-TB | lineage2.2.1 | None | ERR779885 | MDR-TB | lineage4.3.4.2 | pe | SRR10303297 | MDR-TB | lineage2.2.1 | None | SRR13232684 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665803 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR2510196 | MDR-TB | lineage4.3.4.2 | pe | SRR13232503 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798177 | Pre-XDR-TB | lineage2.2.1 | in | SRR24710017 | XDR-TB | lineage2.2.1 | None | SRR24255915 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665741 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665603 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812356 | MDR-TB | lineage4.3.4.2 | pe | ERR3287572 | MDR-TB | lineage4.3.4.2 | None | ERR4813666 | MDR-TB | lineage4.3.4.2 | None | ERR2516933 | MDR-TB | lineage3 | gb | ERR751482 | MDR-TB | lineage4.3.4.2 | pe | ERR751565 | MDR-TB | lineage4.3.4.2 | pe | SRR24710089 | MDR-TB | lineage2.2.1 | None | ERR3287472 | MDR-TB | lineage4.3.4.2 | pe | ERR4798308 | MDR-TB | lineage1.2.2.2 | in | ERR4813449 | MDR-TB | lineage4.3.4.2 | pe | ERR13285740 | MDR-TB | lineage4.3.3 | None | SRR3085314 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430322 | MDR-TB | lineage2.2.1 | None | ERR751582 | MDR-TB | lineage4.3.4.2 | pe | SRR13232688 | Pre-XDR-TB | lineage2.2.1 | None | ERR775342 | MDR-TB | lineage4.3.4.2 | pe | ERR2510170 | MDR-TB | lineage4.3.4.2 | pe | ERR4812064 | MDR-TB | lineage4.3.4.2 | None | ERR775351 | MDR-TB | lineage4.3.4.2 | pe | SRR16088466 | MDR-TB | lineage4.3.4.2 | None | ERR4829756 | MDR-TB | lineage4.3.4.2 | it | ERR4830058 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370489 | MDR-TB | lineage4.3.4.2 | None | ERR2510202 | MDR-TB | lineage4.3.4.2 | pe | ERR6866134 | MDR-TB | lineage4.3.4.2 | None | SRR13232442 | MDR-TB | lineage2.2.1 | None | ERR6865735 | MDR-TB | lineage4.3.4.2 | None | SRR070009 | MDR-TB | lineage2.2.1 | None | ERR775350 | MDR-TB | lineage4.3.4.2 | pe | ERR4828110 | MDR-TB | lineage2.2.1 | None | ERR3287570 | MDR-TB | lineage4.3.4.2 | None | SRR28706583 | MDR-TB | lineage2.2.1 | None | ERR2510850 | Pre-XDR-TB | lineage2.2.1 | it | ERR10762254 | MDR-TB | lineage4.3.3 | None | ERR12117916 | MDR-TB | lineage4.3.4.2 | None | ERR4178182 | MDR-TB | lineage4.3.4.2 | None |
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