Rv2043c - p.Leu120Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
54 MDR-TB
86 Pre-XDR-TB
6 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 50 |
| lineage4.1.1.3 | 37 |
| lineage2.2.2 | 3 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 30 |
| lineage4.2.1 | 4 |
| lineage2.2.1.1 | 6 |
| lineage4.6.2.2 | 5 |
| lineage4.1.1.3;lineage4.3.4.2 | 3 |
| lineage4.1.2.1 | 2 |
| lineage2.2;lineage3 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.1;lineage2.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2864293 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3287848 | MDR-TB | lineage4.1.1.3 | pe | ERR4831756 | MDR-TB | lineage2.2.2 | vn | ERR1034905 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4813316 | MDR-TB | lineage4.1.1.3 | None | ERR2516313 | Pre-XDR-TB | lineage4.3.4.2 | be | SRR6367399 | MDR-TB | lineage1.1.2 | au | ERR1034867 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034870 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035214 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034825 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3561988 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR25207026 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887777 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393443 | MDR-TB | lineage4.1.1.3 | None | ERR6662371 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR12057444 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR8774289 | MDR-TB | lineage4.1.1.3 | None | ERR4830745 | MDR-TB | lineage2.2.1 | ir | SRR7755726 | Pre-XDR-TB | lineage4.2.1 | None | ERR11773828 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093853 | MDR-TB | lineage2.2.1 | None | SRR6511592 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR7645794 | Pre-XDR-TB | lineage4.2.1 | None | ERR5866412 | MDR-TB | lineage2.2.1 | None | SRR8368702 | MDR-TB | lineage2.2.1 | None | SRR28393391 | MDR-TB | lineage4.1.1.3 | None | SRR28393619 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4132449 | MDR-TB | lineage2.2.1 | None | SRR1368341 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR30180264 | MDR-TB | lineage2.2.1.1 | None | ERR2307639 | MDR-TB | lineage2.2.1 | None | SRR1368337 | XDR-TB | lineage2.2.1 | None | SRR29385419 | MDR-TB | lineage2.2.2 | None | ERR1227522 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR3287844 | MDR-TB | lineage4.1.1.3 | pe | ERR3148198 | MDR-TB | lineage4.1.1.3 | mx | ERR3148172 | MDR-TB | lineage4.1.1.3 | mx | ERR3148222 | Pre-XDR-TB | lineage4.1.1.3 | mx | ERR275189 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11641184 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR12311996 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28706516 | MDR-TB | lineage2.2.1 | None | ERR4813420 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR4831757 | MDR-TB | lineage2.2.2 | vn | SRR28393884 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28351287 | MDR-TB | lineage2.2.1.1 | None | SRR12420759 | RR-TB | lineage2.2.1 | None | SRR6807716 | Pre-XDR-TB | lineage4.2.1 | None | ERR2516625 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516728 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516664 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516525 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516573 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516709 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2516543 | MDR-TB | lineage4.1.1.3 | pe | ERR1034910 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035196 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035253 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034829 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034837 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR6326071 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5530522 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR8774267 | MDR-TB | lineage4.6.2.2 | None | ERR9029872 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.4.2 | None | SRR3742662 | XDR-TB | lineage2.2.1 | None | SRR3105788 | MDR-TB | lineage2.2.1.1 | None | SRR3743403 | Pre-XDR-TB | lineage4.2.1 | None | ERR1034888 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR19276644 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1368339 | XDR-TB | lineage2.2.1 | None | SRR6511638 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1035337 | MDR-TB | lineage4.1.2.1 | br | SRR6511601 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR25515571 | MDR-TB | lineage2.2.1 | None | SRR1368338 | XDR-TB | lineage2.2.1 | None | SRR1368340 | Pre-XDR-TB | lineage2.2.1 | None | ERR1036276 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3148201 | MDR-TB | lineage4.1.1.3 | mx | ERR3148219 | MDR-TB | lineage4.1.1.3 | mx | ERR3287857 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.4.2 | None | ERR5866414 | MDR-TB | lineage2.2.1 | None | SRR1173380 | Pre-XDR-TB | lineage2.2;lineage3 | None | SRR29539774 | Pre-XDR-TB | lineage4.3.3 | None | ERR275187 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664622 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2864298 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864234 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864267 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864276 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864216 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864287 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR8774358 | MDR-TB | lineage2.2.1 | None | ERR4809257 | MDR-TB | lineage2.2.1.1;lineage2.2.2 | za | ERR8975766 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR1679585 | MDR-TB | lineage4.6.2.2 | None | ERR2516901 | Pre-XDR-TB | lineage4.3.4.2 | gb | ERR2516990 | Pre-XDR-TB | lineage4.3.4.2 | gb | ERR2516752 | Pre-XDR-TB | lineage4.3.4.2 | gb | ERR1034859 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR3742660 | XDR-TB | lineage2.2.1 | None | ERR1035195 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035207 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR6257101 | MDR-TB | lineage2.2.1 | ru | ERR3148160 | MDR-TB | lineage4.1.1.3 | None | SRR28393545 | MDR-TB | lineage4.1.1.3 | None | SRR28394046 | MDR-TB | lineage4.1.1.3 | None | ERR4423639 | MDR-TB | lineage4.6.2.2 | None | ERR775379 | Pre-XDR-TB | lineage4.1.1.3 | pe | SAMEA5570051 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.4.2 | None | ERR4423638 | MDR-TB | lineage4.6.2.2 | None | SRR6832046 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR3287383 | MDR-TB | lineage4.1.1.3 | pe | SRR28351518 | MDR-TB | lineage4.2.1;lineage4.8 | None | SRR29772449 | Pre-XDR-TB | lineage1.1.2 | None | SRR8345980 | MDR-TB | lineage2.2.1 | None | SRR6511645 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28119715 | MDR-TB | lineage2.2.1 | None | ERR3148154 | MDR-TB | lineage4.1.1.3 | None | SRR6511636 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4423646 | MDR-TB | lineage4.1.1.3 | None | SRR21733184 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742658 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10147712 | MDR-TB | lineage2.2.1 | None | SRR7516373 | HR-TB | lineage2.2.1 | None | ERR3132222 | MDR-TB | lineage2.2.1 | None | ERR1034814 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR13180411 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR275199 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275202 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3148151 | MDR-TB | lineage4.1.1.3 | None | ERR5866413 | MDR-TB | lineage2.2.1 | None | SRR3742659 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742661 | XDR-TB | lineage2.2.1 | None | ERR4797828 | Pre-XDR-TB | lineage4.8 | in | SRR28394176 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1034903 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034906 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3148175 | Pre-XDR-TB | lineage4.1.1.3 | mx | ERR3148173 | MDR-TB | lineage4.1.1.3 | mx | ERR3148183 | MDR-TB | lineage4.1.1.3 | mx | ERR3148197 | Pre-XDR-TB | lineage4.1.1.3 | mx | ERR3148176 | MDR-TB | lineage4.1.1.3 | mx | ERR3148217 | MDR-TB | lineage4.1.1.3 | mx | ERR8774269 | MDR-TB | lineage4.6.2.2 | None | ERR1664647 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664657 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1035299 | MDR-TB | lineage4.1.2.1 | br |
|---|
