lineage | Count |
---|---|
lineage3 | 4 |
lineage2.2.1 | 187 |
lineage4.8;lineage2.2.1 | 2 |
lineage2.2 | 1 |
lineage1.1.2 | 2 |
2 | |
lineage4.8 | 6 |
lineage2.2.1.1 | 2 |
lineage4.1.2.1 | 1 |
lineage4.5 | 1 |
lineage4.3.3;lineage4.1.2.1 | 1 |
lineage4.3.4.2;lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 210 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796961 | Pre-XDR-TB | lineage3 | in | ERR4799396 | MDR-TB | lineage2.2.1 | in | ERR4799872 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830641 | Pre-XDR-TB | lineage2.2.1 | tm | SRR6458406 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830575 | MDR-TB | lineage2.2.1 | tm | ERR4830587 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830621 | MDR-TB | lineage2.2.1 | tm | ERR4822597 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830604 | MDR-TB | lineage2.2.1 | tm | ERR4830586 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830622 | MDR-TB | lineage2.2.1 | tm | ERR4830589 | MDR-TB | lineage2.2.1 | tm | ERR4830574 | MDR-TB | lineage2.2.1 | tm | ERR4822295 | MDR-TB | lineage2.2.1 | de | ERR4830629 | MDR-TB | lineage2.2.1 | tm | ERR4822585 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830591 | MDR-TB | lineage2.2.1 | tm | ERR4830585 | MDR-TB | lineage2.2.1 | tm | ERR4830899 | Pre-XDR-TB | lineage2.2.1 | np | ERR4822587 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822586 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | ERR4822588 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830584 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830900 | Pre-XDR-TB | lineage2.2.1 | np | ERR4822596 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822591 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822594 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | ERR4822590 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822595 | Pre-XDR-TB | lineage2.2.1 | tm | DRR454960 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830993 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830906 | Pre-XDR-TB | lineage2.2.1 | np | ERR4800376 | Pre-XDR-TB | lineage2.2.1 | in | ERR4831635 | Pre-XDR-TB | lineage2.2 | None | ERR4830902 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830907 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830908 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830659 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830755 | MDR-TB | lineage2.2.1 | ir | SRR6964619 | MDR-TB | lineage1.1.2 | None | SRR7652976 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043812 | Pre-XDR-TB | lineage2.2.1 | None | DRR130072 | Pre-XDR-TB | lineage2.2.1 | None | DRR130071 | Pre-XDR-TB | lineage2.2.1 | None | DRR454962 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639738 | MDR-TB | lineage2.2.1 | None | ERR3639714 | MDR-TB | lineage2.2.1 | None | ERR3639720 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044256 | MDR-TB | lineage2.2.1 | None | ERR3639806 | MDR-TB | lineage2.2.1 | None | ERR3794437 | MDR-TB | lineage2.2.1 | None | ERR3794384 | MDR-TB | lineage2.2.1 | None | ERR3794364 | MDR-TB | lineage2.2.1 | None | ERR3794371 | MDR-TB | lineage2.2.1 | None | ERR3794412 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794417 | MDR-TB | lineage2.2.1 | None | ERR4830651 | MDR-TB | lineage2.2.1 | None | ERR3794507 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276861 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553501 | MDR-TB | None | ERR4553732 | MDR-TB | None | ERR2515756 | Pre-XDR-TB | lineage4.8 | za | SRR22137410 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865906 | MDR-TB | lineage2.2.1 | None | ERR4800615 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665827 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088346 | MDR-TB | lineage2.2.1 | None | SRR069948 | Pre-XDR-TB | lineage2.2.1 | None | SRR069927 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137423 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137432 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137430 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137416 | XDR-TB | lineage2.2.1 | None | SRR22137456 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137475 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137461 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137466 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137470 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737893 | MDR-TB | lineage4.8 | None | ERR7737889 | MDR-TB | lineage4.8 | None | SRR22137449 | MDR-TB | lineage2.2.1 | None | SRR22137424 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137453 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137414 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137431 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137421 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137459 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125253 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125213 | MDR-TB | lineage2.2.1 | None | SRR22137469 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125486 | MDR-TB | lineage2.2.1 | None | ERR9125473 | MDR-TB | lineage2.2.1 | None | SRR10303277 | MDR-TB | lineage2.2.1 | None | ERR9993124 | MDR-TB | lineage4.8 | None | SRR070008 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303276 | MDR-TB | lineage2.2.1 | None | SRR10303354 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303285 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303347 | MDR-TB | lineage2.2.1 | None | SRR10430353 | MDR-TB | lineage2.2.1 | None | SRR10305980 | MDR-TB | lineage2.2.1 | None | SRR10430352 | MDR-TB | lineage2.2.1 | None | SRR10430401 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430362 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430349 | MDR-TB | lineage2.2.1 | None | SRR1163306 | MDR-TB | lineage2.2.1 | None | SRR1144772 | MDR-TB | lineage2.2.1 | None | SRR1146339 | MDR-TB | lineage2.2.1 | None | SRR13180435 | MDR-TB | lineage2.2.1 | None | SRR11786865 | MDR-TB | lineage2.2.1 | None | SRR11972447 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163459 | MDR-TB | lineage2.2.1 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SRR11972180 | MDR-TB | lineage2.2.1.1 | None | SRR16058662 | MDR-TB | lineage2.2.1 | None | SRR13232787 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232484 | MDR-TB | lineage2.2.1 | None | SRR13232619 | MDR-TB | lineage2.2.1 | None | SRR15014627 | MDR-TB | lineage2.2.1 | None | SRR16057904 | MDR-TB | lineage2.2.1 | None | SRR16058404 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058676 | MDR-TB | lineage2.2.1 | None | SRR16097562 | Pre-XDR-TB | lineage2.2.1 | None | SRR16115879 | MDR-TB | lineage2.2.1 | None | SRR16100235 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370448 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR18715419 | MDR-TB | lineage2.2.1 | None | SRR18714772 | MDR-TB | lineage2.2.1 | None | SRR24710063 | MDR-TB | lineage2.2.1 | None | SRR24709888 | MDR-TB | lineage2.2.1 | None | SRR24710012 | MDR-TB | lineage2.2.1 | None | SRR18715453 | Pre-XDR-TB | lineage2.2.1 | None | SRR18912994 | MDR-TB | lineage2.2.1 | None | SRR24709898 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710075 | MDR-TB | lineage2.2.1 | None | SRR24710140 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710282 | MDR-TB | lineage2.2.1 | None | SRR24710185 | MDR-TB | lineage2.2.1 | None | SRR24710206 | MDR-TB | lineage2.2.1 | None | SRR25827335 | Pre-XDR-TB | lineage2.2.1 | None | SRR21658565 | MDR-TB | lineage2.2.1 | None | SRR22351866 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | SRR22351869 | MDR-TB | lineage2.2.1 | None | SRR22351871 | MDR-TB | lineage2.2.1 | None | ERR11082858 | MDR-TB | lineage2.2.1 | None | SRR23938593 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938614 | MDR-TB | lineage2.2.1 | None | SRR23938600 | MDR-TB | lineage2.2.1 | None | SRR23938609 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938626 | XDR-TB | lineage2.2.1 | None | SRR23938620 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938616 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938642 | MDR-TB | lineage2.2.1 | None | SRR23938658 | MDR-TB | lineage2.2.1 | None | SRR23938679 | MDR-TB | lineage2.2.1 | None | SRR23938702 | MDR-TB | lineage2.2.1 | None | SRR23938694 | MDR-TB | lineage2.2.1 | None | ERR10610210 | MDR-TB | lineage4.8 | None | ERR9806646 | MDR-TB | lineage4.8 | None | SRR6797656 | MDR-TB | lineage1.1.2 | None | SRR24709882 | MDR-TB | lineage2.2.1 | None | SRR24709924 | MDR-TB | lineage2.2.1 | None | SRR24709885 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137412 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137446 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137427 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137426 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137413 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137429 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137454 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137455 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137450 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137451 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137464 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137457 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137460 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137463 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137472 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137462 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137473 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710104 | MDR-TB | lineage2.2.1 | None | SRR22137474 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710105 | MDR-TB | lineage2.2.1 | None | SRR24710051 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827600 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023413 | MDR-TB | lineage2.2.1 | None | SRR6824403 | MDR-TB | lineage2.2.1 | cn | ERR1034876 | MDR-TB | lineage2.2.1 | pt | ERR2513229 | MDR-TB | lineage2.2.1 | None | SAMEA2534162 | MDR-TB | lineage2.2.1 | uz | SRR25534583 | MDR-TB | lineage2.2.1 | None | SRR1723792 | MDR-TB | lineage2.2.1 | cn | SRR3105743 | Pre-XDR-TB | lineage4.5 | None | ERR2677433 | MDR-TB | lineage2.2.1 | de | ERR4819356 | RR-TB | lineage4.3.3;lineage4.1.2.1 | None | SAMEA2533996 | RR-TB | lineage2.2.1 | uz | ERR4827758 | MDR-TB | lineage2.2.1 | None | SAMN02414932 | MDR-TB | lineage2.2.1 | se | ERR1023407 | MDR-TB | lineage2.2.1 | None | ERR2516947 | Pre-XDR-TB | lineage3 | gb | ERR2516750 | Pre-XDR-TB | lineage3 | gb | ERR2517023 | Pre-XDR-TB | lineage3 | gb | ERR4798301 | Pre-XDR-TB | lineage2.2.1 | in | ERR2516229 | MDR-TB | lineage2.2.1 | be | ERR2516183 | MDR-TB | lineage2.2.1 | be | ERR4798365 | Pre-XDR-TB | lineage2.2.1 | in | ERR2516485 | Pre-XDR-TB | lineage4.3.4.2;lineage4.1.2.1 | pe |
---|