Rv2043c - p.Leu182Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
1 HR-TB
129 MDR-TB
132 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 245 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage4.8 | 9 |
| lineage1.2.2.2 | 4 |
| lineage4.5 | 2 |
| lineage4.1.2.1 | 2 |
| lineage3 | 5 |
| lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 271 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28706435 | MDR-TB | lineage2.2.1 | None | SRR28045651 | MDR-TB | lineage2.2.1 | None | ERR4830899 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830902 | Pre-XDR-TB | lineage2.2.1 | np | SRR28044553 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458406 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706588 | MDR-TB | lineage2.2.1 | None | SRR28045463 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706452 | MDR-TB | lineage2.2.1 | None | SRR28706377 | XDR-TB | lineage2.2.1 | None | ERR4822295 | MDR-TB | lineage2.2.1 | de | ERR4822585 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822588 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822597 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822594 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | ERR1023413 | MDR-TB | lineage2.2.1 | None | ERR4830584 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830585 | MDR-TB | lineage2.2.1 | tm | ERR4830591 | MDR-TB | lineage2.2.1 | tm | ERR4830586 | Pre-XDR-TB | lineage2.2.1 | tm | SRR22137466 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830574 | MDR-TB | lineage2.2.1 | tm | ERR4830575 | MDR-TB | lineage2.2.1 | tm | ERR4830755 | MDR-TB | lineage2.2.1 | ir | ERR4830621 | MDR-TB | lineage2.2.1 | tm | ERR4830622 | MDR-TB | lineage2.2.1 | tm | ERR4830641 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830651 | MDR-TB | lineage2.2.1 | None | ERR4830659 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830906 | Pre-XDR-TB | lineage2.2.1 | np | ERR8665827 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137456 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710063 | MDR-TB | lineage2.2.1 | None | SRR22137460 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137424 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680032 | MDR-TB | lineage2.2.1 | None | SRR23938609 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515756 | Pre-XDR-TB | lineage4.8 | za | SRR24710012 | MDR-TB | lineage2.2.1 | None | SRR22137450 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706394 | MDR-TB | lineage2.2.1 | None | SRR22137453 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706556 | MDR-TB | lineage2.2.1 | None | SRR28706664 | MDR-TB | lineage2.2.1 | None | SRR22137431 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710105 | MDR-TB | lineage2.2.1 | None | SRR1163459 | MDR-TB | lineage2.2.1 | None | SRR23938600 | MDR-TB | lineage2.2.1 | None | ERR2677433 | MDR-TB | lineage2.2.1 | de | SRR22137449 | MDR-TB | lineage2.2.1 | None | ERR4276861 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553732 | MDR-TB | lineage1.2.2.2 | None | SRR22137427 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137423 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303347 | MDR-TB | lineage2.2.1 | None | SRR22137474 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137464 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430349 | MDR-TB | lineage2.2.1 | None | ERR9993124 | MDR-TB | lineage4.8 | None | SRR16100235 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553501 | MDR-TB | lineage1.2.2.2 | None | SRR22137410 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125213 | MDR-TB | lineage2.2.1 | None | ERR9125473 | MDR-TB | lineage2.2.1 | None | ERR9125486 | MDR-TB | lineage2.2.1 | None | ERR4822595 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822586 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | SRR16097562 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830900 | Pre-XDR-TB | lineage2.2.1 | np | ERR9125253 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232619 | MDR-TB | lineage2.2.1 | None | SRR3105743 | Pre-XDR-TB | lineage4.5 | None | SRR22137455 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710185 | MDR-TB | lineage2.2.1 | None | SRR070008 | Pre-XDR-TB | lineage2.2.1 | None | SRR10147710 | MDR-TB | lineage2.2.1 | None | ERR13273077 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137454 | Pre-XDR-TB | lineage2.2.1 | None | SRR22351866 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772763 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137421 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706669 | MDR-TB | lineage2.2.1 | None | ERR13265574 | MDR-TB | lineage2.2.1 | None | ERR3794384 | MDR-TB | lineage2.2.1 | None | ERR13284176 | MDR-TB | lineage2.2.1 | None | ERR13284064 | MDR-TB | lineage2.2.1 | None | SRR24710206 | MDR-TB | lineage2.2.1 | None | SRR29053172 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR22137475 | Pre-XDR-TB | lineage2.2.1 | None | ERR13259992 | MDR-TB | lineage2.2.1 | None | SRR22137425 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938642 | MDR-TB | lineage2.2.1 | None | SRR22137470 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714772 | MDR-TB | lineage2.2.1 | None | SRR22137432 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794371 | MDR-TB | lineage2.2.1 | None | ERR1034876 | MDR-TB | lineage2.2.1 | pt | SRR22137473 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639806 | MDR-TB | lineage2.2.1 | None | SRR29094004 | MDR-TB | lineage3 | None | ERR13266764 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938679 | MDR-TB | lineage2.2.1 | None | SRR25534583 | MDR-TB | lineage2.2.1 | None | ERR3639738 | MDR-TB | lineage2.2.1 | None | ERR3794412 | Pre-XDR-TB | lineage2.2.1 | None | SRR22351869 | MDR-TB | lineage2.2.1 | None | DRR454962 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137446 | Pre-XDR-TB | lineage2.2.1 | None | SRR069927 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232484 | MDR-TB | lineage2.2.1 | None | SRR24710282 | MDR-TB | lineage2.2.1 | None | SRR23938702 | MDR-TB | lineage2.2.1 | None | ERR11043812 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137426 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284178 | MDR-TB | lineage2.2.1 | None | SRR28858620 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709898 | XDR-TB | lineage2.2.1 | None | SRR25827335 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260093 | MDR-TB | lineage2.2.1 | None | ERR4796961 | Pre-XDR-TB | lineage3 | in | ERR11044256 | MDR-TB | lineage2.2.1 | None | SRR24709924 | MDR-TB | lineage2.2.1 | None | ERR4798365 | Pre-XDR-TB | lineage2.2.1 | in | ERR4827758 | MDR-TB | lineage2.2.1 | None | SRR22137462 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137412 | Pre-XDR-TB | lineage2.2.1 | None | SRR29053543 | MDR-TB | lineage2.2.1 | None | SRR23938593 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137463 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794364 | MDR-TB | lineage2.2.1 | None | ERR4799872 | Pre-XDR-TB | lineage2.2.1 | in | ERR7737893 | MDR-TB | lineage4.8 | None | SRR13180435 | MDR-TB | lineage2.2.1 | None | ERR13258495 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430352 | MDR-TB | lineage2.2.1 | None | SRR22137429 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709882 | MDR-TB | lineage2.2.1 | None | DRR130071 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773798 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706548 | MDR-TB | lineage2.2.1 | None | SRR28706528 | MDR-TB | lineage2.2.1 | None | SRR28706653 | MDR-TB | lineage2.2.1 | None | SRR28044798 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775622 | MDR-TB | lineage4.8 | None | ERR4830587 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830589 | MDR-TB | lineage2.2.1 | tm | ERR4830604 | MDR-TB | lineage2.2.1 | tm | ERR4830629 | MDR-TB | lineage2.2.1 | tm | ERR4830907 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830908 | Pre-XDR-TB | lineage2.2.1 | np | ERR1023407 | MDR-TB | lineage2.2.1 | None | ERR4830993 | Pre-XDR-TB | lineage2.2.1 | np | SRR23938616 | Pre-XDR-TB | lineage2.2.1 | None | DRR454960 | Pre-XDR-TB | lineage2.2.1 | None | SRR11786865 | MDR-TB | lineage2.2.1 | None | SAMEA2533996 | RR-TB | lineage2.2.1 | uz | SAMEA2534162 | MDR-TB | lineage2.2.1 | uz | ERR2516750 | Pre-XDR-TB | lineage3 | gb | ERR2516947 | Pre-XDR-TB | lineage3 | gb | ERR2517023 | Pre-XDR-TB | lineage3 | gb | ERR2516229 | MDR-TB | lineage2.2.1 | be | ERR2516183 | MDR-TB | lineage2.2.1 | be | ERR2516485 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4.2 | pe | SRR6824403 | MDR-TB | lineage2.2.1 | cn | ERR7737889 | MDR-TB | lineage4.8 | None | SRR28706686 | MDR-TB | lineage2.2.1 | None | SRR22137414 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082858 | MDR-TB | lineage2.2.1 | None | SRR22137430 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137413 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715419 | MDR-TB | lineage2.2.1 | None | SRR28706390 | MDR-TB | lineage2.2.1 | None | SRR22137451 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265695 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303276 | MDR-TB | lineage2.2.1 | None | ERR3794417 | MDR-TB | lineage2.2.1 | None | ERR3794507 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303354 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709885 | Pre-XDR-TB | lineage2.2.1 | None | ERR551745 | MDR-TB | lineage2.2.1 | None | SRR24709888 | MDR-TB | lineage2.2.1 | None | SRR22137472 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058662 | MDR-TB | lineage2.2.1 | None | ERR10610210 | MDR-TB | lineage4.8 | None | SRR10430401 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058404 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266761 | XDR-TB | lineage2.2.1 | None | SRR16057904 | MDR-TB | lineage2.2.1 | None | SRR22137469 | Pre-XDR-TB | lineage2.2.1 | None | ERR551515_ERR551516_ERR551514 | RR-TB | lineage2.2.1 | None | SRR18912994 | MDR-TB | lineage2.2.1 | None | ERR9806646 | MDR-TB | lineage4.8 | None | SRR1723792 | MDR-TB | lineage2.2.1 | cn | DRR130072 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265411 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014627 | MDR-TB | lineage2.2.1 | None | SRR29341509 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370448 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29772444 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137457 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017602 | MDR-TB | lineage1.2.2.2 | None | SRR29016883 | MDR-TB | lineage1.2.2.2 | None | ERR13258398 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260034 | MDR-TB | lineage2.2.1 | None | SRR10430362 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292433 | MDR-TB | lineage2.2.1 | None | SRR16058676 | MDR-TB | lineage2.2.1 | None | ERR13276363 | MDR-TB | lineage2.2.1 | None | ERR13291955 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430353 | MDR-TB | lineage2.2.1 | None | ERR551745_ERR551743_ERR551744 | MDR-TB | lineage2.2.1 | None | ERR4800615 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286035 | Pre-XDR-TB | lineage4.8 | None | SRR29441041 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303285 | Pre-XDR-TB | lineage2.2.1 | None | SRR069948 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710051 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710104 | MDR-TB | lineage2.2.1 | None | SRR18715453 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305980 | MDR-TB | lineage2.2.1 | None | SRR23938694 | MDR-TB | lineage2.2.1 | None | SRR22137461 | Pre-XDR-TB | lineage2.2.1 | None | SRR28409723 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291833 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706422 | Pre-XDR-TB | lineage2.2.1 | None | ERR551515 | RR-TB | lineage2.2.1 | None | SRR22137416 | XDR-TB | lineage2.2.1 | None | SRR21658565 | MDR-TB | lineage2.2.1 | None | SRR30182501 | MDR-TB | lineage2.2.1 | None | ERR3639714 | MDR-TB | lineage2.2.1 | None | SRR23938620 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938626 | XDR-TB | lineage2.2.1 | None | SRR24710140 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794437 | MDR-TB | lineage2.2.1 | None | ERR13291130 | Pre-XDR-TB | lineage2.2.1 | None | SRR22351871 | MDR-TB | lineage2.2.1 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303277 | MDR-TB | lineage2.2.1 | None | SRR22137459 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938658 | MDR-TB | lineage2.2.1 | None | ERR13284148 | MDR-TB | lineage2.2.1 | None | ERR13291573 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284768 | MDR-TB | lineage2.2.1 | None | SRR6964619 | MDR-TB | lineage1.1.2 | None | SRR23938614 | MDR-TB | lineage2.2.1 | None | SRR16088346 | MDR-TB | lineage2.2.1 | None | SRR7652976 | Pre-XDR-TB | lineage2.2.1 | None | SRR16115879 | MDR-TB | lineage2.2.1 | None | ERR551744 | MDR-TB | lineage2.2.1 | None | SRR25827600 | Pre-XDR-TB | lineage2.2.1 | None | ERR13283994 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800376 | Pre-XDR-TB | lineage2.2.1 | in | ERR13260877 | MDR-TB | lineage4.8 | None | ERR4798301 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799396 | MDR-TB | lineage2.2.1 | in | SRR24710075 | MDR-TB | lineage2.2.1 | None | ERR551514 | RR-TB | lineage2.2.1 | None | ERR3639720 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414932 | MDR-TB | lineage2.2.1 | se | ERR5865906 | MDR-TB | lineage2.2.1 | None | SRR28046115 | HR-TB | lineage4.5 | None | SRR28706558 | MDR-TB | lineage2.2.1 | None | SRR28045574 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045255 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822587 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822590 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822591 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822596 | Pre-XDR-TB | lineage2.2.1 | tm | SRR28706498 | MDR-TB | lineage2.2.1 | None | SRR28706624 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706397 | MDR-TB | lineage2.2.1 | None |
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