Rv2043c - p.Leu85Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
6 HR-TB
122 MDR-TB
44 Pre-XDR-TB
13 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 107 |
| lineage4.1.2.1 | 7 |
| lineage4.3.3 | 20 |
| lineage4.2.1 | 16 |
| lineage3.1 | 8 |
| lineage4.3.4.1 | 6 |
| lineage4.5 | 3 |
| lineage2.2.1.1 | 5 |
| lineage4.3.2.1 | 1 |
| lineage8 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9 | 1 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 190 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11081185 | MDR-TB | lineage2.2.1 | None | SRR7516333 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762424 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152954 | MDR-TB | lineage2.2.1 | None | SRR20632777 | XDR-TB | lineage2.2.1 | None | ERR5865417 | MDR-TB | lineage2.2.1 | None | ERR11081082 | MDR-TB | lineage4.1.2.1 | None | ERR5864564 | MDR-TB | lineage2.2.1 | None | ERR13290282 | MDR-TB | lineage4.3.3 | None | ERR5865413 | MDR-TB | lineage2.2.1 | None | ERR553095 | MDR-TB | lineage4.1.2.1 | None | SRR28240143 | HR-TB | lineage2.2.1 | None | ERR5864585 | MDR-TB | lineage2.2.1 | None | SRR24673521 | MDR-TB | lineage2.2.1 | None | SRR7646060 | Pre-XDR-TB | lineage4.2.1 | None | SRR1166913 | MDR-TB | lineage4.3.3 | None | SRR1167120 | MDR-TB | lineage4.3.3 | None | ERR5866263 | MDR-TB | lineage2.2.1 | None | ERR11798747 | Pre-XDR-TB | lineage4.2.1 | None | SRR25207022 | MDR-TB | lineage2.2.1 | None | SRR11567794 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017619 | MDR-TB | lineage3.1 | None | ERR5865414 | MDR-TB | lineage2.2.1 | None | SRR18714800 | MDR-TB | lineage2.2.1 | None | SRR29231836 | MDR-TB | lineage4.3.4.1 | None | SRR18714811 | MDR-TB | lineage2.2.1 | None | ERR13290285 | MDR-TB | lineage4.3.3 | None | SRR12062480 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907725 | MDR-TB | lineage4.3.4.1 | None | ERR13290429 | MDR-TB | lineage4.3.3 | None | SRR1146383 | MDR-TB | lineage4.3.3 | None | ERR5865418 | MDR-TB | lineage2.2.1 | None | SRR28239733 | MDR-TB | lineage2.2.1 | None | SRR10379908 | XDR-TB | lineage4.2.1 | None | SRR25628576 | MDR-TB | lineage4.5 | None | ERR13285086 | MDR-TB | lineage2.2.1 | None | ERR5864572 | MDR-TB | lineage2.2.1 | None | SRR28498692 | MDR-TB | lineage4.2.1 | None | ERR4830923 | Pre-XDR-TB | lineage2.2.1 | np | ERR7911738 | MDR-TB | lineage2.2.1 | us | ERR4831862 | MDR-TB | lineage2.2.1.1 | vn | ERR8975641 | MDR-TB | lineage4.3.2.1 | None | SRR7645786 | Pre-XDR-TB | lineage4.2.1 | None | ERR2517092 | MDR-TB | lineage2.2.1 | gb | ERR2517071 | MDR-TB | lineage2.2.1 | gb | ERR13284281 | MDR-TB | lineage2.2.1 | None | ERR5864565 | MDR-TB | lineage2.2.1 | None | SRR24256075 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290283 | MDR-TB | lineage4.3.3 | None | SAMN02567762 | MDR-TB | lineage8 | None | SRR20632824 | XDR-TB | lineage2.2.1 | None | ERR4553663 | MDR-TB | lineage3.1 | None | SRR24828592 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516399 | MDR-TB | lineage2.2.1 | be | ERR2515390 | MDR-TB | lineage4.3.3 | None | ERR551721 | Other | lineage2.2.1;lineage4 | None | ERR4827531 | RR-TB | lineage4.2.1 | None | SRR3743486 | Pre-XDR-TB | lineage4.2.1 | None | ERR5864575 | MDR-TB | lineage2.2.1 | None | ERR5864578 | MDR-TB | lineage2.2.1 | None | SRR23310965 | Pre-XDR-TB | lineage4.2.1 | None | SRR4423140 | MDR-TB | lineage3.1 | None | SRR22424742 | MDR-TB | lineage1.1.2 | None | SRR1162793 | MDR-TB | lineage4.3.3 | None | ERR4553988 | MDR-TB | lineage3.1 | None | SRR14782546 | HR-TB | lineage2.2.1 | None | ERR5864571 | MDR-TB | lineage2.2.1 | None | ERR5864583 | MDR-TB | lineage2.2.1 | None | ERR5866264 | MDR-TB | lineage2.2.1 | None | ERR13284000 | XDR-TB | lineage2.2.1 | None | SRR1144777 | MDR-TB | lineage4.3.3 | None | SRR18714882 | MDR-TB | lineage2.2.1 | None | ERR5864573 | MDR-TB | lineage2.2.1 | None | ERR13285094 | MDR-TB | lineage2.2.1 | None | ERR553244 | MDR-TB | lineage4.1.2.1 | None | SRR12062484 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969455 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380139 | Pre-XDR-TB | lineage4.2.1 | None | SRR10040386 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163030 | MDR-TB | lineage4.3.3 | None | SRR3743492 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827663 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755659 | MDR-TB | lineage4.2.1 | None | SRR1165456 | MDR-TB | lineage4.3.3 | None | ERR5864584 | MDR-TB | lineage2.2.1 | None | ERR5864579 | MDR-TB | lineage2.2.1 | None | ERR5864581 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414905 | MDR-TB | lineage4.3.3 | se | SAMN02414852 | MDR-TB | lineage4.3.3 | se | ERR11138643 | RR-TB | lineage4.9 | None | SRR14801592 | Pre-XDR-TB | lineage4.2.1 | None | SRR28393409 | HR-TB | lineage2.2.1;lineage4.3.4.1 | None | SRR28393839 | HR-TB | lineage2.2.1 | None | ERR3273214 | MDR-TB | lineage4.1.2.1 | None | SRR7516317 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911388 | Pre-XDR-TB | lineage2.2.1 | us | ERR5866262 | MDR-TB | lineage2.2.1 | None | ERR6662373 | MDR-TB | lineage4.3.4.1 | None | SRR28393605 | MDR-TB | lineage4.1.1.1 | None | SRR10306009 | MDR-TB | lineage2.2.1 | None | SRR6824500 | MDR-TB | lineage2.2.1 | cn | SRR10040210 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632806 | XDR-TB | lineage2.2.1 | None | ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None | SRR16186844 | XDR-TB | lineage2.2.1 | None | SRR29772770 | MDR-TB | lineage3 | None | SRR5153235 | MDR-TB | lineage2.2.1 | None | SRR14782833 | Pre-XDR-TB | lineage4.2.1 | None | ERR553094 | MDR-TB | lineage4.1.2.1 | None | SRR16186845 | XDR-TB | lineage2.2.1 | None | SRR6807763 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088066 | XDR-TB | lineage2.2.1 | None | ERR552169 | MDR-TB | lineage2.2.1 | None | SAMN03246269 | MDR-TB | lineage2.2.1 | cn | SRR7070296 | MDR-TB | lineage4.2.1 | None | ERR5865416 | MDR-TB | lineage2.2.1 | None | ERR11044701 | XDR-TB | lineage2.2.1 | None | SRR24256146 | MDR-TB | lineage2.2.1 | None | SRR1723516 | MDR-TB | lineage2.2.1 | None | SRR29016833 | XDR-TB | lineage3.1 | None | ERR13285096 | MDR-TB | lineage4.1.2.1 | None | ERR7737882 | MDR-TB | lineage4.2.2.2 | None | SRR16058057 | MDR-TB | lineage2.2.1 | None | ERR13290427 | MDR-TB | lineage4.3.3 | None | SRR29385302 | MDR-TB | lineage2.2.1.1 | None | SRR1723515 | MDR-TB | lineage2.2.1 | None | SRR10380011 | Pre-XDR-TB | lineage4.2.1 | None | SRR29231673 | MDR-TB | lineage4.3.4.1 | None | ERR5864580 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864582 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290284 | MDR-TB | lineage4.3.3 | None | SRR25207152 | MDR-TB | lineage4.5 | None | SRR25628575 | Pre-XDR-TB | lineage4.5 | None | SRR29538937 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153720 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093109 | Pre-XDR-TB | lineage2.2.2 | None | ERR11068626 | MDR-TB | lineage2.2.1 | None | SRR28393400 | HR-TB | lineage2.2.1.1;lineage4.3.3 | None | ERR5864570 | MDR-TB | lineage2.2.1 | None | SRR24256335 | MDR-TB | lineage2.2.1 | None | SRR16186843 | HR-TB | lineage2.2.1 | None | ERR4553975 | XDR-TB | lineage3.1 | None | SRR8651592 | Pre-XDR-TB | lineage2.2.2 | cn | ERR1034982 | MDR-TB | lineage2.2.1.1 | za | ERR4797925 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207271 | MDR-TB | lineage2.2.1 | None | ERR4800308 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798995 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13290426 | MDR-TB | lineage4.3.3 | None | ERR5864574 | MDR-TB | lineage2.2.1 | None | ERR5865415 | MDR-TB | lineage2.2.1 | None | SRR28351262 | MDR-TB | lineage2.2.1 | None | SRR28498721 | MDR-TB | lineage4.2.1 | None | SRR28240056 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069402 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394213 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2707180 | MDR-TB | lineage4.3.4.1 | cd | ERR2707176 | MDR-TB | lineage4.3.4.1 | cd | ERR502930 | MDR-TB | lineage2.2.1 | None | ERR1023398 | MDR-TB | lineage4.3.3 | None | ERR8975797 | RR-TB | lineage2.2.1 | None | ERR5864563 | MDR-TB | lineage2.2.1 | None | ERR133951 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2041937 | MDR-TB | lineage2.2.1 | None | ERR2041932 | MDR-TB | lineage2.2.1 | None | ERR2041931 | MDR-TB | lineage2.2.1 | None | ERR2516799 | MDR-TB | lineage2.2.1 | gb | ERR2516748 | MDR-TB | lineage2.2.1 | gb | ERR2516851 | MDR-TB | lineage4.2.1 | gb | ERR040115 | MDR-TB | lineage4.1.1.3 | ug | SRR29096865 | RR-TB | lineage4.4.1.1 | None | ERR5864569 | MDR-TB | lineage2.2.1 | None | SRR29016823 | Pre-XDR-TB | lineage3.1 | None | ERR13285085 | MDR-TB | lineage2.2.1 | None | ERR4553661 | MDR-TB | lineage3.1 | None | ERR13290428 | MDR-TB | lineage4.3.3 | None | SRR1163196 | MDR-TB | lineage4.3.3 | None | ERR5864567 | MDR-TB | lineage2.2.1 | None | ERR10868818 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864566 | MDR-TB | lineage2.2.1 | None | ERR5864568 | MDR-TB | lineage2.2.1 | None | ERR5865950 | MDR-TB | lineage2.2.1 | None | ERR5864576 | MDR-TB | lineage2.2.1 | None | SRR1173284 | MDR-TB | lineage8 | None | SRR1173725 | MDR-TB | lineage8 | None | SRR28351440 | XDR-TB | lineage3 | None | ERR9125331 | MDR-TB | lineage2.2.1 | None | ERR4831262 | XDR-TB | lineage2.2.1 | de | ERR5864577 | MDR-TB | lineage2.2.1 | None |
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