lineage | Count |
---|---|
lineage2.2 | 2 |
lineage2.2.1 | 81 |
lineage2.2.1.1 | 4 |
lineage4.2.1 | 12 |
lineage4.1.1.3 | 1 |
lineage2.2.2 | 1 |
lineage3.1 | 4 |
lineage4.1.2.1 | 2 |
lineage4.3.3 | 12 |
lineage1.2.2.2 | 1 |
lineage4.3.4.1 | 4 |
lineage4.3.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage8 | 2 |
lineage1.1.2 | 1 |
lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 130 |
ID | Drug resistance | Lineage | Country iso2 | SRR6831861 | MDR-TB | lineage2.2 | None | ERR4831262 | XDR-TB | lineage2.2.1 | de | SRR6824500 | MDR-TB | lineage2.2.1 | cn | SRR6807763 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831862 | MDR-TB | lineage2.2.1.1 | vn | ERR502930 | MDR-TB | lineage2.2.1 | None | SRR7645786 | Pre-XDR-TB | lineage4.2.1 | None | SRR7516333 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516317 | Pre-XDR-TB | lineage2.2.1 | None | ERR040115 | MDR-TB | lineage4.1.1.3 | ug | SRR7646060 | Pre-XDR-TB | lineage4.2.1 | None | SRR8651592 | Pre-XDR-TB | lineage2.2.2 | cn | SRR7755659 | MDR-TB | lineage4.2.1 | None | ERR4553661 | MDR-TB | lineage3.1 | None | ERR10762424 | Pre-XDR-TB | lineage2.2.1 | None | ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044701 | XDR-TB | lineage2.2.1 | None | ERR133951 | Pre-XDR-TB | lineage2.2.1 | ru | ERR3273214 | MDR-TB | lineage4.1.2.1 | None | ERR1023398 | MDR-TB | lineage4.3.3 | None | ERR1034982 | MDR-TB | lineage2.2.1.1 | za | ERR4553975 | Pre-XDR-TB | lineage3.1 | None | ERR4553988 | Pre-XDR-TB | lineage3.1 | None | ERR5864565 | MDR-TB | lineage2.2.1 | None | ERR4553663 | MDR-TB | lineage3.1 | None | ERR4797925 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR4800308 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798995 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5864566 | MDR-TB | lineage2.2.1 | None | ERR5864567 | MDR-TB | lineage2.2.1 | None | ERR5864564 | MDR-TB | lineage2.2.1 | None | ERR5864563 | MDR-TB | lineage2.2.1 | None | ERR5864568 | MDR-TB | lineage2.2.1 | None | ERR5864571 | MDR-TB | lineage2.2.1 | None | ERR5864577 | MDR-TB | lineage2.2.1 | None | ERR5864572 | MDR-TB | lineage2.2.1 | None | ERR5864569 | MDR-TB | lineage2.2.1 | None | ERR5864575 | MDR-TB | lineage2.2.1 | None | ERR5864570 | MDR-TB | lineage2.2.1 | None | ERR5864576 | MDR-TB | lineage2.2.1 | None | ERR5864578 | MDR-TB | lineage2.2.1 | None | ERR5864581 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864579 | MDR-TB | lineage2.2.1 | None | ERR5864573 | MDR-TB | lineage2.2.1 | None | ERR5864580 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864574 | MDR-TB | lineage2.2.1 | None | ERR5864582 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864583 | MDR-TB | lineage2.2.1 | None | ERR6662373 | MDR-TB | lineage4.3.4.1 | None | ERR5864584 | MDR-TB | lineage2.2.1 | None | ERR5864585 | MDR-TB | lineage2.2.1 | None | ERR5865413 | MDR-TB | lineage2.2.1 | None | ERR5865416 | MDR-TB | lineage2.2.1 | None | ERR5865418 | MDR-TB | lineage2.2.1 | None | ERR5865414 | MDR-TB | lineage2.2.1 | None | ERR5865415 | MDR-TB | lineage2.2.1 | None | ERR5865417 | MDR-TB | lineage2.2.1 | None | ERR5865950 | MDR-TB | lineage2.2.1 | None | ERR5866263 | MDR-TB | lineage2.2.1 | None | ERR5866262 | MDR-TB | lineage2.2.1 | None | ERR5866264 | MDR-TB | lineage2.2.1 | None | ERR8975641 | MDR-TB | lineage4.3.2.1 | None | ERR7737882 | MDR-TB | lineage4.2.2.2 | None | ERR7911388 | Pre-XDR-TB | lineage2.2.1 | us | ERR7911738 | MDR-TB | lineage2.2.1 | us | ERR8975797 | RR-TB | lineage2.2.1 | None | ERR9907725 | MDR-TB | lineage4.3.4.1 | None | ERR9125331 | MDR-TB | lineage2.2.1 | None | SRR10306001 | MDR-TB | lineage2.2.1 | None | SRR10306009 | MDR-TB | lineage2.2.1 | None | SRR10380011 | Pre-XDR-TB | lineage4.2.1 | None | SRR10379908 | XDR-TB | lineage4.2.1 | None | SRR1144777 | MDR-TB | lineage4.3.3 | None | SRR10380139 | Pre-XDR-TB | lineage4.2.1 | None | SRR1146383 | MDR-TB | lineage4.3.3 | None | SRR1165456 | MDR-TB | lineage4.3.3 | None | SRR11567794 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162793 | MDR-TB | lineage4.3.3 | None | SRR1163030 | MDR-TB | lineage4.3.3 | None | SRR1163196 | MDR-TB | lineage4.3.3 | None | SRR1173284 | MDR-TB | lineage8 | None | SRR1166913 | MDR-TB | lineage4.3.3 | None | SRR1167120 | MDR-TB | lineage4.3.3 | None | SRR14782833 | Pre-XDR-TB | lineage4.2.1 | None | SRR1173725 | MDR-TB | lineage8 | None | SRR14782546 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714811 | MDR-TB | lineage2.2.1 | None | SRR14801592 | Pre-XDR-TB | lineage4.2.1 | None | SRR16186845 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058057 | MDR-TB | lineage2.2.1 | None | SRR16186843 | Pre-XDR-TB | lineage2.2.1 | None | SRR16186844 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714800 | MDR-TB | lineage2.2.1 | None | SRR18714882 | MDR-TB | lineage2.2.1 | None | SRR20632806 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632777 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424742 | MDR-TB | lineage1.1.2 | None | SRR20632824 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081082 | MDR-TB | lineage4.1.2.1 | None | ERR11068626 | MDR-TB | lineage2.2.1 | None | ERR11138643 | RR-TB | lineage4.9 | None | ERR11081185 | MDR-TB | lineage2.2.1 | None | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152954 | MDR-TB | lineage2.2.1 | None | SAMN03246269 | MDR-TB | lineage2.2.1 | cn | ERR2041931 | MDR-TB | lineage2.2.1 | None | SAMN03246243 | MDR-TB | lineage2.2.1 | cn | SRR3743486 | Pre-XDR-TB | lineage4.2.1 | None | SAMN02414852 | MDR-TB | lineage4.3.3 | se | SRR3743492 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515390 | MDR-TB | lineage4.3.3 | None | SRR5153235 | MDR-TB | lineage2.2.1 | None | ERR2517071 | MDR-TB | lineage2.2.1 | gb | ERR2516399 | MDR-TB | lineage2.2.1 | be | SRR5153720 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516851 | MDR-TB | lineage4.2.1 | gb | ERR2516748 | MDR-TB | lineage2.2.1 | gb | ERR2517092 | MDR-TB | lineage2.2.1 | gb | ERR2516799 | MDR-TB | lineage2.2.1 | gb | ERR2707180 | MDR-TB | lineage4.3.4.1 | cd | ERR2041932 | MDR-TB | lineage2.2.1 | None | SRR20969455 | MDR-TB | lineage2.2 | None | SRR23310965 | MDR-TB | lineage4.2.1 | None | ERR2707176 | MDR-TB | lineage4.3.4.1 | cd | ERR2041937 | MDR-TB | lineage2.2.1 | None | ERR4827661 | MDR-TB | lineage2.2.1 | None | ERR4827531 | RR-TB | lineage4.2.1 | None | ERR4827663 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414905 | MDR-TB | lineage4.3.3 | se | ERR4830923 | Pre-XDR-TB | lineage2.2.1 | np |
---|