lineage | Count |
---|---|
lineage2.2.1 | 18 |
lineage2.2.2 | 4 |
lineage4.8 | 10 |
lineage4 | 2 |
lineage1.1.2 | 1 |
lineage4.3.3 | 3 |
lineage4.6.1.2 | 1 |
lineage4.9 | 1 |
lineage4.1.2.1 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1.1 | 2 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | ERR7910975 | Pre-XDR-TB | lineage2.2.1 | md | SRR12420431 | MDR-TB | lineage2.2.1 | None | SRR3743392 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782391 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420370 | RR-TB | lineage2.2.1 | None | SRR8651558 | XDR-TB | lineage2.2.2 | cn | SRR28351197 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680155 | MDR-TB | lineage4.8 | None | ERR13276031 | MDR-TB | lineage4.8 | None | ERR13261927 | Pre-XDR-TB | lineage4 | None | SRR12420462 | RR-TB | lineage2.2.1 | None | SRR6807672 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782385 | Pre-XDR-TB | lineage2.2.1 | None | SRR3105766 | Pre-XDR-TB | lineage1.1.2 | None | SAMN02628523 | MDR-TB | lineage4.8 | ir | ERR4827987 | MDR-TB | lineage2.2.1 | None | SRR12420275 | RR-TB | lineage2.2.1 | None | SRR24673518 | MDR-TB | lineage4.3.3 | None | ERR6358862 | MDR-TB | lineage4.6.1.2 | None | SRR28351516 | Pre-XDR-TB | lineage2.2.1 | None | ERR4457846 | HR-TB | lineage4 | None | SRR8791308 | Other | lineage4.9 | None | ERR13284995 | MDR-TB | lineage2.2.2 | None | SRR12420444 | RR-TB | lineage2.2.1 | None | SRR6807758 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261552 | MDR-TB | lineage4.8 | None | SRR28393824 | MDR-TB | lineage4.8 | None | ERR11798533 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393263 | MDR-TB | lineage4.1.2.1 | None | SRR6650103 | Other | lineage1.1.3.1 | None | SRR12420310 | MDR-TB | lineage2.2.1 | None | SRR1183085 | MDR-TB | lineage4.8 | None | SRR11972357 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11069075 | MDR-TB | lineage2.2.2 | None | SRR1172252 | MDR-TB | lineage4.8 | None | SRR1172151 | MDR-TB | lineage4.8 | None | SRR12420418 | RR-TB | lineage2.2.1 | None | ERR5866588 | MDR-TB | lineage4.3.3 | None | SRR22424890 | MDR-TB | lineage4.8 | None | SRR1180184 | MDR-TB | lineage4.8 | None | SRR16088223 | MDR-TB | lineage4.3.3 | None | SRR20632794 | MDR-TB | lineage2.2.1.1 | None | SRR11567804 | XDR-TB | lineage2.2.2 | None | SRR14782060 | Pre-XDR-TB | lineage2.2.1 | None |
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