lineage | Count |
---|---|
lineage4.3.4.2.1 | 2 |
lineage2.2.1.2 | 1 |
lineage2.2.1 | 20 |
lineage2.2.2 | 5 |
lineage1.1.2 | 2 |
lineage1.2.2.2 | 3 |
lineage4.3.3 | 6 |
lineage4.1.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.5 | 1 |
lineage3 | 2 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 45 |
ID | Drug resistance | Lineage | Country iso2 | ERR1193894 | HR-TB | lineage4.3.4.2.1 | sz | SRR25827613 | MDR-TB | lineage2.2.1.2 | None | SRR1723783 | RR-TB | lineage2.2.1 | None | SRR22351863 | MDR-TB | lineage2.2.1 | None | SAMN02403489 | MDR-TB | lineage2.2.2 | za | ERR688038 | MDR-TB | lineage1.1.2 | None | ERR1213948 | HR-TB | lineage1.2.2.2 | bd | ERR502941 | MDR-TB | lineage2.2.1 | None | SAMN02584584 | MDR-TB | lineage4.3.3 | md | ERR11050454 | Other | lineage1.2.2.2 | None | SRR21887687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166116 | MDR-TB | lineage4.3.3 | None | SRR1173382 | MDR-TB | lineage2.2.2 | None | SRR1165271 | MDR-TB | lineage2.2.2 | None | SRR22175255 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832845 | MDR-TB | lineage2.2.1 | None | ERR1034606 | MDR-TB | lineage1.1.2 | pk | ERR2653231 | MDR-TB | lineage4.1.1.1 | None | SRR28393315 | MDR-TB | lineage4.3.3 | None | SRR1166305 | MDR-TB | lineage4.3.3 | None | SRR11662433 | MDR-TB | lineage1.1.1.1 | None | SRR1173168 | MDR-TB | lineage2.2.2 | None | SRR28706577 | MDR-TB | lineage2.2.1 | None | ERR5917703 | MDR-TB | lineage2.2.1 | by | SRR24710224 | MDR-TB | lineage2.2.1 | None | SRR1167177 | MDR-TB | lineage2.2.2 | None | SRR13232412 | MDR-TB | lineage2.2.1 | None | SRR6824406 | MDR-TB | lineage2.2.1 | cn | SRR6831753 | MDR-TB | lineage2.2.1 | None | SAMN02584648 | MDR-TB | lineage4.3.3 | md | SRR1168995 | MDR-TB | lineage4.3.3 | None | ERR3335757 | Pre-XDR-TB | lineage4.5 | pk | SRR24710179 | MDR-TB | lineage2.2.1 | None | ERR3132241 | HR-TB | lineage1.2.2.2 | None | ERR4831446 | Pre-XDR-TB | lineage3 | None | ERR4796948 | MDR-TB | lineage2.2.1 | in | ERR552352 | HR-TB | lineage4.3.4.2.1 | sz | SRR22424850 | Pre-XDR-TB | lineage3 | None | SRR25395635 | Pre-XDR-TB | lineage2.2.1 | None | SRR671831 | MDR-TB | lineage4.4.2 | cn | ERR3794355 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710121 | MDR-TB | lineage2.2.1 | None | ERR3276277 | MDR-TB | lineage2.2.1 | nl | SRR21690899 | MDR-TB | lineage2.2.1 | None | SRR8651597 | Pre-XDR-TB | lineage2.2.1 | cn |
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