Rv2043c - p.Met175Val
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
1 HR-TB
73 MDR-TB
67 Pre-XDR-TB
6 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 97 |
| lineage4.8 | 32 |
| lineage3.1.1 | 4 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage3 | 3 |
| lineage4.3.3 | 3 |
| lineage2.2.1.1 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.3.2 | 1 |
| La1.8.2 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 153 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7646015 | MDR-TB | lineage2.2.1 | None | ERR2307492 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267063 | XDR-TB | lineage4.8 | None | ERR4796802 | MDR-TB | lineage2.2.1 | in | SRR13180218 | Pre-XDR-TB | lineage2.2.1 | None | ERR553192_ERR553191 | MDR-TB | lineage2.2.1 | None | ERR13275931 | MDR-TB | lineage2.2.1 | None | DRR473971 | RR-TB | lineage2.2.1 | None | SRR17163493 | MDR-TB | lineage3.1.1 | None | ERR4809351 | Pre-XDR-TB | lineage4.8 | za | ERR4810927 | MDR-TB | lineage2.2.1 | cn | ERR4831023 | Pre-XDR-TB | lineage2.2.1 | np | ERR4822317 | MDR-TB | lineage2.2.1 | de | SRR2024931 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811297 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911699 | Pre-XDR-TB | lineage4.8 | za | ERR4830981 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830982 | Pre-XDR-TB | lineage2.2.1 | np | SAMEA2535200 | MDR-TB | lineage2.2.1 | uz | ERR2516910 | MDR-TB | lineage2.2.1 | gb | SRR6824505 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1172288 | MDR-TB | lineage2.2.1 | None | ERR2307561 | MDR-TB | lineage2.2.1 | None | SRR10040267 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553713 | MDR-TB | lineage4.8 | None | SRR11033685 | MDR-TB | lineage2.2.1 | None | SRR23311021 | MDR-TB | lineage4.2.1 | None | ERR4827920 | MDR-TB | lineage2.2.1 | None | ERR9806927 | Pre-XDR-TB | lineage4.8 | None | ERR4831234 | MDR-TB | lineage2.2.1 | None | ERR4799491 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796343 | XDR-TB | lineage4.8 | in | ERR2516256 | Pre-XDR-TB | lineage2.2.1 | be | ERR11774835 | XDR-TB | lineage4.8 | None | ERR7361969 | Pre-XDR-TB | lineage4.8 | None | SRR24256021 | MDR-TB | lineage2.2.1 | None | SRR16157104 | Pre-XDR-TB | lineage4.8 | None | SRR16157095 | Pre-XDR-TB | lineage4.8 | None | SRR29096374 | Pre-XDR-TB | lineage4.8 | None | SRR29096490 | Pre-XDR-TB | lineage4.8 | None | SRR29096151 | Pre-XDR-TB | lineage4.8 | None | SRR29096739 | MDR-TB | lineage4.8 | None | SRR29093532 | Pre-XDR-TB | lineage4.8 | None | ERR10762341 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385499 | MDR-TB | lineage2.2.1 | None | ERR11043687 | MDR-TB | lineage2.2.1 | None | SRR12420761 | MDR-TB | lineage2.2.1 | None | SRR13423554 | Pre-XDR-TB | lineage2.2.1 | None | ERR552560 | MDR-TB | lineage2.2.1 | None | ERR13276255 | MDR-TB | lineage2.2.1 | None | SRR10040291 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307390 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423552 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420684 | RR-TB | lineage2.2.1 | None | ERR13260533 | Other | lineage4.1.2.1 | None | SRR23340087 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017248 | MDR-TB | lineage4.8 | None | ERR13284793 | MDR-TB | lineage2.2.1 | None | ERR10112865 | Pre-XDR-TB | lineage4.8 | None | SRR24255961 | MDR-TB | lineage2.2.1 | None | SRR1183064 | MDR-TB | lineage2.2.1 | None | ERR13290827 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285889 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822556 | XDR-TB | lineage2.2.1 | ua | SAMN02628526 | MDR-TB | lineage2.2.1 | ir | SRR2024902 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8975707 | Pre-XDR-TB | lineage4.8 | None | ERR2517020 | Pre-XDR-TB | lineage3 | gb | ERR13290929 | MDR-TB | lineage2.2.1 | None | ERR13261392 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827813 | XDR-TB | lineage2.2.1 | None | ERR13286169 | Pre-XDR-TB | lineage4.8 | None | ERR13289009 | Pre-XDR-TB | lineage4.8 | None | SRR12062495 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286196 | Pre-XDR-TB | lineage4.8 | None | ERR2516291 | Pre-XDR-TB | lineage2.2.1 | be | ERR9806659 | MDR-TB | lineage4.8 | None | ERR9992758 | Pre-XDR-TB | lineage4.8 | None | ERR9992991 | Pre-XDR-TB | lineage4.8 | None | ERR9993197 | Pre-XDR-TB | lineage4.8 | None | ERR9806893 | Pre-XDR-TB | lineage4.8 | None | SRR17163491 | MDR-TB | lineage3.1.1 | None | SRR29055400 | MDR-TB | lineage2.2.1 | None | SRR18714831 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056131 | MDR-TB | lineage2.2.1 | None | SRR10040292 | MDR-TB | lineage2.2.1 | None | SRR9971273 | MDR-TB | lineage4.3.3 | None | SRR29539733 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610166 | MDR-TB | lineage4.8 | None | SRR23340096 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307735 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972338 | MDR-TB | lineage2.2.1.1 | None | ERR4276912 | MDR-TB | lineage2.2.1 | None | SRR6832113 | MDR-TB | lineage2.2.1 | None | SRR12420440 | MDR-TB | lineage2.2.1 | None | SRR17163494 | MDR-TB | lineage3.1.1 | None | ERR4796872 | Pre-XDR-TB | lineage2.2.1 | in | ERR552560_ERR552561_ERR552559 | MDR-TB | lineage2.2.1 | None | SRR28394225 | MDR-TB | lineage4.1.1.3 | None | SRR12062558 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289513 | Pre-XDR-TB | lineage3 | None | ERR553191 | MDR-TB | lineage2.2.1 | None | SRR13423566 | MDR-TB | lineage2.2.1 | None | ERR3287387 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR28498679 | MDR-TB | lineage2.2.1 | None | SRR25206950 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830958 | Pre-XDR-TB | lineage2.2.1 | np | SRR10040449 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911120 | MDR-TB | lineage2.2.1.1 | vn | ERR2707135 | MDR-TB | lineage4.3.3 | cd | ERR751576 | MDR-TB | lineage4.1.2.1 | pe | ERR4830978 | Pre-XDR-TB | lineage2.2.1 | np | ERR502929 | Pre-XDR-TB | lineage2.2.1 | None | ERR775385 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR775386 | MDR-TB | lineage4.1.2.1 | pe | ERR4830904 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR8975807 | MDR-TB | lineage4.8 | None | ERR552559 | MDR-TB | lineage2.2.1 | None | SAMEA2534732 | MDR-TB | lineage2.2.1 | uz | SRR3675217 | Pre-XDR-TB | lineage3 | gb | ERR2516359 | Pre-XDR-TB | lineage2.2.1 | be | SRR6339666 | HR-TB | lineage4.8 | au | ERR7737852 | MDR-TB | lineage2.2.1.1 | None | SRR1172183 | MDR-TB | lineage2.2.1 | None | ERR2307391 | MDR-TB | lineage2.2.1 | None | ERR2677451 | MDR-TB | lineage2.2.1 | de | ERR8025470 | Pre-XDR-TB | lineage4.8 | None | ERR13289036 | MDR-TB | lineage4.8 | None | SRR13423564 | Pre-XDR-TB | lineage2.2.1 | None | ERR552561 | RR-TB | lineage2.2.1 | None | ERR553192 | MDR-TB | lineage2.2.1 | None | ERR7737878 | MDR-TB | lineage2.2.1 | None | SRR8758888 | MDR-TB | lineage2.2.1 | None | ERR776661 | MDR-TB | lineage4.3.2 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR7851336 | Other | La1.8.2 | None | SRR10305663 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112848 | XDR-TB | lineage4.8 | None | SRR1180141 | MDR-TB | lineage2.2.1 | None | SRR21576586 | MDR-TB | lineage2.2.1 | None | SRR6832587 | MDR-TB | lineage2.2.1 | None | SRR17163498 | MDR-TB | lineage3.1.1 | None | SRR15014733 | MDR-TB | lineage2.2.1 | None | SRR12062513 | MDR-TB | lineage2.2.1 | None | SRR12062512 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539125 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR6353882 | MDR-TB | lineage2.2.1 | None | ERR13284931 | MDR-TB | lineage2.2.1 | None | SRR12420748 | RR-TB | lineage2.2.1 | None | SRR29231687 | MDR-TB | lineage4.3.3 | None | SRR13423553 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043637 | MDR-TB | lineage2.2.1 | None | ERR7911000 | MDR-TB | lineage2.2.1 | pe |
|---|
