lineage | Count |
---|---|
lineage4.8 | 20 |
lineage4.1.1.3 | 3 |
lineage2.2.1.1 | 4 |
lineage4.1.2.1 | 2 |
lineage2.2.1 | 54 |
lineage4.3.2 | 2 |
lineage3.1.1 | 4 |
lineage3 | 2 |
lineage4.2.1 | 2 |
lineage2.2 | 2 |
lineage4.3.3 | 2 |
1 | |
La1.8.2 | 1 |
spoligotype | Count |
---|---|
None | 99 |
ID | Drug resistance | Lineage | Country iso2 | ERR7361969 | Pre-XDR-TB | lineage4.8 | None | ERR775385 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR7737852 | MDR-TB | lineage2.2.1.1 | None | ERR751576 | MDR-TB | lineage4.1.2.1 | pe | ERR7737878 | MDR-TB | lineage2.2.1 | None | ERR775386 | MDR-TB | lineage4.1.2.1 | pe | ERR8975807 | MDR-TB | lineage4.8 | None | ERR7911120 | MDR-TB | lineage2.2.1.1 | vn | ERR8975707 | Pre-XDR-TB | lineage4.8 | None | ERR776661 | MDR-TB | lineage4.3.2 | None | ERR7911000 | MDR-TB | lineage2.2.1 | pe | ERR7911699 | Pre-XDR-TB | lineage4.8 | za | SRR1172288 | MDR-TB | lineage2.2.1 | None | ERR9992758 | Pre-XDR-TB | lineage4.8 | None | ERR9992991 | Pre-XDR-TB | lineage4.8 | None | ERR9993197 | Pre-XDR-TB | lineage4.8 | None | SRR11033685 | MDR-TB | lineage2.2.1 | None | SRR10305663 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172183 | MDR-TB | lineage2.2.1 | None | SRR13423552 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183064 | MDR-TB | lineage2.2.1 | None | SRR13423553 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180141 | MDR-TB | lineage2.2.1 | None | SRR11972338 | MDR-TB | lineage2.2.1.1 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180218 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423554 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157104 | Pre-XDR-TB | lineage4.8 | None | SRR13423566 | MDR-TB | lineage2.2.1 | None | SRR16157095 | Pre-XDR-TB | lineage4.8 | None | SRR13423564 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014733 | MDR-TB | lineage2.2.1 | None | SRR17163498 | MDR-TB | lineage3.1.1 | None | SRR17163491 | MDR-TB | lineage3.1.1 | None | SRR17163494 | MDR-TB | lineage3.1.1 | None | ERR9806659 | MDR-TB | lineage4.8 | None | ERR8025470 | Pre-XDR-TB | lineage4.8 | None | SRR17163493 | MDR-TB | lineage3.1.1 | None | SRR18714831 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576586 | MDR-TB | lineage2.2.1 | None | ERR9806927 | Pre-XDR-TB | lineage4.8 | None | ERR10112865 | Pre-XDR-TB | lineage4.8 | None | ERR10112848 | Pre-XDR-TB | lineage4.8 | None | ERR9806893 | Pre-XDR-TB | lineage4.8 | None | ERR10610166 | MDR-TB | lineage4.8 | None | SRR2024902 | Pre-XDR-TB | lineage2.2.1 | cn | SRR3675217 | Pre-XDR-TB | lineage3 | gb | SRR2024931 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2677451 | MDR-TB | lineage2.2.1 | de | SAMN02628526 | MDR-TB | lineage2.2.1 | ir | SAMEA2534732 | MDR-TB | lineage2.2.1 | uz | ERR2517020 | Pre-XDR-TB | lineage3 | gb | ERR2516910 | MDR-TB | lineage2.2.1 | gb | ERR2516359 | Pre-XDR-TB | lineage2.2.1 | be | ERR2516404 | Pre-XDR-TB | lineage4.3.2 | pe | SRR23311021 | MDR-TB | lineage4.2.1 | None | ERR2516291 | Pre-XDR-TB | lineage2.2.1 | be | ERR2516256 | Pre-XDR-TB | lineage2.2.1 | be | SRR23340096 | MDR-TB | lineage2.2 | None | ERR2707135 | MDR-TB | lineage4.3.3 | cd | SRR23340087 | Pre-XDR-TB | lineage2.2 | None | SRR6353882 | MDR-TB | lineage2.2.1 | None | ERR4827920 | MDR-TB | lineage2.2.1 | None | ERR4822317 | MDR-TB | lineage2.2.1 | de | SRR6339666 | HR-TB | lineage4.8 | au | ERR4822556 | Pre-XDR-TB | lineage2.2.1 | ua | ERR4830904 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR6257052 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830978 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830958 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830981 | Pre-XDR-TB | lineage2.2.1 | np | SRR6257075 | MDR-TB | None | ERR4830982 | Pre-XDR-TB | lineage2.2.1 | np | SRR6832113 | MDR-TB | lineage2.2.1 | None | ERR4831023 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831234 | MDR-TB | lineage2.2.1 | None | SRR6832587 | MDR-TB | lineage2.2.1 | None | SRR7646015 | MDR-TB | lineage2.2.1 | None | SRR6855952 | Other | lineage4.1.1.3 | None | SAMEA2535200 | MDR-TB | lineage2.2.1 | uz | SRR6824505 | Pre-XDR-TB | lineage2.2.1 | cn | ERR502929 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971273 | MDR-TB | lineage4.3.3 | None | ERR11043687 | MDR-TB | lineage2.2.1 | None | SRR7851336 | Other | La1.8.2 | None | ERR11043637 | MDR-TB | lineage2.2.1 | None | SRR7755695 | MDR-TB | lineage2.2.1 | None | ERR10762341 | Pre-XDR-TB | lineage2.2.1 | None | ERR11003793 | MDR-TB | lineage4.2.1 | None | ERR4276912 | MDR-TB | lineage2.2.1 | None | ERR3287387 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR4553713 | MDR-TB | lineage4.8 | None | ERR4796343 | XDR-TB | lineage4.8 | in | ERR4796872 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796802 | MDR-TB | lineage2.2.1 | in | ERR4799491 | Pre-XDR-TB | lineage2.2.1 | in | ERR4810927 | MDR-TB | lineage2.2.1 | cn | ERR4809351 | Pre-XDR-TB | lineage4.8 | za | ERR4811297 | Pre-XDR-TB | lineage2.2.1 | cn |
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