lineage | Count |
---|---|
lineage1.2.2.2 | 1 |
lineage4.2.2.2;lineage2.2 | 1 |
lineage2.2.1 | 13 |
lineage4.4.2 | 1 |
lineage4.4.1.1.1 | 3 |
lineage4.1.1 | 1 |
lineage4.1.3 | 1 |
lineage2.2.2 | 1 |
lineage3 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2 | 1 |
lineage4.7 | 3 |
spoligotype | Count |
---|---|
None | 28 |
ID | Drug resistance | Lineage | Country iso2 | ERR4799454 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR18593214 | MDR-TB | lineage4.2.2.2;lineage2.2 | None | ERR5865380 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865378 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380063 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782614 | HR-TB | lineage2.2.1 | None | ERR4800166 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811300 | MDR-TB | lineage4.4.2 | cn | ERR5865379 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865381 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865382 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370519 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101519 | HR-TB | lineage4.4.1.1.1 | None | ERR2653165 | MDR-TB | lineage4.1.1 | None | SAMEA2533785 | MDR-TB | lineage2.2.1 | uz | ERR2516657 | Pre-XDR-TB | lineage4.1.3 | nl | ERR11069054 | MDR-TB | lineage2.2.2 | None | ERR2510547 | Pre-XDR-TB | lineage3 | None | ERR2515155 | MDR-TB | lineage4.4.1.1.1 | za | ERR4827444 | MDR-TB | lineage4.1.2.1 | None | SRR23310823 | Pre-XDR-TB | lineage2.2 | None | SRR6982127 | HR-TB | lineage4.4.1.1.1 | None | ERR4829049 | MDR-TB | lineage4.7 | it | ERR4830140 | MDR-TB | lineage2.2.1 | None | ERR4830143 | MDR-TB | lineage2.2.1 | None | ERR4829729 | Pre-XDR-TB | lineage4.7 | it | ERR4831612 | MDR-TB | lineage2.2.1 | vn | SRR7131008 | MDR-TB | lineage4.7 | None |
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