lineage | Count |
---|---|
lineage2.2.1 | 43 |
lineage4.3.3 | 7 |
lineage4.6.1.1 | 1 |
lineage1.2.2.2 | 6 |
lineage2.2.1.1 | 5 |
1 | |
lineage1.1.2;lineage2.2.1;lineage3 | 1 |
lineage1.1.2 | 1 |
lineage1.2.2.2;lineage4 | 2 |
lineage4.5 | 2 |
lineage4.3.4.2 | 1 |
lineage1.1.3 | 2 |
lineage2.2.1;lineage4 | 1 |
lineage4.2.1.1 | 1 |
lineage4.1.2 | 3 |
lineage4.1.1.3 | 2 |
lineage4.6.2.2 | 2 |
lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 82 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR27450307 | HR-TB | lineage2.2.1 | None |
ERR13262027 | Pre-XDR-TB | lineage4.3.3 | None |
ERR6358849 | MDR-TB | lineage4.6.1.1 | None |
SRR29017428 | MDR-TB | lineage1.2.2.2 | None |
SRR14782252 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13266142 | Pre-XDR-TB | lineage4.3.3 | None |
SRR29772714 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR29093653 | MDR-TB | lineage4.3.3 | None |
ERR4553412 | MDR-TB | None | |
ERR13261157 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR25827357 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3 | None |
SRR10185955 | MDR-TB | lineage2.2.1 | None |
SRR29538906 | MDR-TB | lineage2.2.1 | None |
SRR29289115 | MDR-TB | lineage1.1.2 | None |
SRR28351469 | Pre-XDR-TB | lineage4.3.3 | None |
ERR4553409 | MDR-TB | lineage1.2.2.2;lineage4 | None |
SRR6824337 | Pre-XDR-TB | lineage4.5 | cn |
SRR1144823 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4827969 | MDR-TB | lineage2.2.1 | None |
SRR29017165 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR29096366 | MDR-TB | lineage4.3.3 | None |
SRR12420310 | MDR-TB | lineage2.2.1 | None |
ERR11798585 | MDR-TB | lineage2.2.1 | None |
ERR5865965 | MDR-TB | lineage4.3.3 | None |
ERR4800375 | Pre-XDR-TB | lineage2.2.1.1 | in |
SAMN02414869 | Pre-XDR-TB | lineage2.2.1 | se |
ERR4553760 | MDR-TB | lineage1.1.3 | None |
ERR4822327 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10397145 | MDR-TB | lineage2.2.1 | None |
SRR1163116 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1163205 | Pre-XDR-TB | lineage2.2.1;lineage4 | None |
SRR29017120 | MDR-TB | lineage1.2.2.2 | None |
ERR4799208 | Pre-XDR-TB | lineage2.2.1.1 | in |
SRR10380144 | MDR-TB | lineage4.2.1.1 | None |
SRR16088408 | Pre-XDR-TB | lineage2.2.1 | None |
ERR6866199 | MDR-TB | lineage4.1.2 | None |
ERR13276301 | Pre-XDR-TB | lineage2.2.1 | None |
SRR30180488 | MDR-TB | lineage2.2.1 | None |
SRR11662629 | MDR-TB | lineage2.2.1 | None |
ERR4553496 | MDR-TB | lineage1.2.2.2 | None |
ERR4797428 | MDR-TB | lineage2.2.1 | in |
SRR1146276 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1023297 | Pre-XDR-TB | lineage2.2.1 | None |
SRR2024910 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR7911331 | MDR-TB | lineage2.2.1 | vn |
SRR2024983 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR671748 | MDR-TB | lineage2.2.1 | cn |
SRR10397131 | MDR-TB | lineage2.2.1 | None |
ERR108439 | MDR-TB | lineage2.2.1 | ru |
ERR3287716 | MDR-TB | lineage4.1.2 | pe |
ERR9119819 | MDR-TB | lineage4.1.1.3 | None |
SRR16370542 | MDR-TB | lineage2.2.1 | None |
ERR2677435 | Pre-XDR-TB | lineage2.2.1 | de |
SRR7645804 | MDR-TB | lineage2.2.1 | None |
ERR4423620 | Pre-XDR-TB | lineage4.6.2.2 | None |
ERR5866534 | MDR-TB | lineage2.2.1 | None |
ERR4553523 | MDR-TB | lineage1.2.2.2 | None |
SRR22251152 | MDR-TB | lineage2.2.1 | None |
ERR7737944 | MDR-TB | lineage2.2.1 | None |
SRR671727 | MDR-TB | lineage2.2.1 | cn |
SRR15014770 | MDR-TB | lineage1.2.2.2 | None |
ERR5987244 | MDR-TB | lineage4.1.1.3 | None |
SRR29017704 | MDR-TB | lineage1.1.3 | None |
SRR1163090 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1163350 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29017676 | MDR-TB | lineage1.2.2.2;lineage4 | None |
SRR10040227 | MDR-TB | lineage2.2.1 | None |
SRR10380159 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5866535 | MDR-TB | lineage2.2.1 | None |
SRR10040239 | MDR-TB | lineage2.2.1 | None |
SRR11662619 | MDR-TB | lineage1.1.1 | None |
ERR4831840 | Pre-XDR-TB | lineage2.2.1 | vn |
ERR4831854 | Pre-XDR-TB | lineage2.2.1 | vn |
ERR4830636 | MDR-TB | lineage2.2.1 | None |
SRR29016870 | MDR-TB | lineage1.2.2.2 | None |
SRR5067693 | Pre-XDR-TB | lineage2.2.1 | vn |
ERR13290754 | MDR-TB | lineage4.5 | None |
ERR8774234 | Pre-XDR-TB | lineage4.6.2.2 | None |
ERR4798735 | Pre-XDR-TB | lineage2.2.1.1 | in |
ERR3287759 | MDR-TB | lineage4.1.2 | pe |
ERR11081434 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4799024 | Pre-XDR-TB | lineage4.3.3 | in |