Rv2043c - p.Pro62Leu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
5 HR-TB
96 MDR-TB
58 Pre-XDR-TB
5 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1 | 110 |
| lineage4.1.2.1 | 5 |
| lineage4.8 | 14 |
| lineage4.2.2.2 | 3 |
| lineage4.3.2.1 | 3 |
| lineage4.2.2 | 1 |
| lineage4 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.2.1 | 6 |
| lineage2.2.2 | 1 |
| lineage4.5 | 3 |
| lineage4.1.1.3 | 6 |
| lineage4.3.4.1 | 1 |
| lineage3 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.1 | 1 |
| lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.3 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 169 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13260095 | MDR-TB | lineage1.2.1.2.1 | None | SRR12420297 | HR-TB | lineage2.2.1 | None | ERR5866344 | MDR-TB | lineage2.2.1 | None | ERR5866345 | MDR-TB | lineage2.2.1 | None | ERR5866346 | MDR-TB | lineage2.2.1 | None | SRR28394047 | MDR-TB | lineage4.1.2.1 | None | SRR1162828 | MDR-TB | lineage4.8 | None | SRR1165564 | MDR-TB | lineage4.8 | None | ERR13262015 | XDR-TB | lineage4.2.2.2 | None | SRR6480497 | Other | lineage2.2.1 | None | SRR25207208 | MDR-TB | lineage2.2.1 | None | ERR13290268 | MDR-TB | lineage4.8 | None | SRR7755739 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207361 | MDR-TB | lineage2.2.1 | None | ERR9806672 | MDR-TB | lineage4.3.2.1 | None | ERR13284653 | MDR-TB | lineage2.2.1 | None | SRR7655785 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866422 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737811 | MDR-TB | lineage2.2.1 | None | SRR1162872 | MDR-TB | lineage4.8 | None | SRR25207324 | Pre-XDR-TB | lineage2.2.1 | None | SRR26159046 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420456 | MDR-TB | lineage2.2.1 | None | ERR2510616 | Pre-XDR-TB | lineage4.2.2 | pk | SRR5153279 | MDR-TB | lineage2.2.1 | None | SRR29093895 | Pre-XDR-TB | lineage4 | None | ERR5866355 | Pre-XDR-TB | lineage2.2.1 | None | SRR10185950 | MDR-TB | lineage1.2.2.2 | None | SRR25207364 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165509 | MDR-TB | lineage4.8 | None | SAMN02414956 | MDR-TB | lineage4.8 | se | SRR1166134 | MDR-TB | lineage4.2.1 | ro | SRR25389496 | MDR-TB | lineage2.2.2 | None | ERR11773803 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911235 | MDR-TB | lineage2.2.1 | md | ERR4810960 | MDR-TB | lineage2.2.1 | cn | ERR4822290 | MDR-TB | lineage4.2.1 | None | ERR7911402 | MDR-TB | lineage2.2.1 | us | ERR7911745 | MDR-TB | lineage2.2.1 | us | SRR25207239 | Pre-XDR-TB | lineage4.5 | None | SRR23311051 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062521 | Pre-XDR-TB | lineage2.2.1 | None | ERR6879017 | MDR-TB | lineage4.1.2.1 | None | ERR13284556 | MDR-TB | lineage2.2.1 | None | ERR13290266 | MDR-TB | lineage4.8 | None | SRR25207343 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085302 | HR-TB | lineage2.2.1 | None | SRR7645960 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256320 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289406 | XDR-TB | lineage4.1.1.3 | None | SRR7516302 | MDR-TB | lineage2.2.1 | None | ERR4810957 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723447 | MDR-TB | lineage2.2.1 | None | ERR4276853 | MDR-TB | lineage4.2.1 | None | SRR25207326 | MDR-TB | lineage2.2.1 | None | SRR10828196 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290267 | MDR-TB | lineage4.8 | None | SRR6484937 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802118 | HR-TB | lineage2.2.1 | None | SRR17040824 | MDR-TB | lineage2.2.1 | None | ERR1034815 | Pre-XDR-TB | lineage4.3.4.1 | pt | SRR25207101 | Pre-XDR-TB | lineage2.2.1 | None | SRR29289220 | Pre-XDR-TB | lineage3 | None | SRR5153904 | MDR-TB | lineage2.2.1 | None | ERR4799949 | HR-TB | lineage4.2.2.2 | in | SRR10380073 | MDR-TB | lineage4.2.1 | None | SRR7653027 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040294 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239879 | MDR-TB | lineage2.2.1 | None | ERR4799802 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR3086373 | HR-TB | lineage2.2.1 | None | ERR4810789 | MDR-TB | lineage2.2.1 | cn | ERR4810466 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28044330 | Pre-XDR-TB | lineage3 | None | ERR552859 | MDR-TB | lineage2.2.1 | None | ERR4810481 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810831 | MDR-TB | lineage2.2.1 | cn | ERR4810977 | Pre-XDR-TB | lineage4.5 | cn | ERR551535 | MDR-TB | lineage2.2.1 | None | ERR5865309 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044545 | MDR-TB | lineage2.2.1 | None | ERR2515337 | XDR-TB | lineage4.1.1.3 | za | SRR6339640 | MDR-TB | lineage2.2.1 | au | ERR10877862 | MDR-TB | lineage4.8 | None | SRR26159045 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737833 | MDR-TB | lineage2.2.1 | None | SRR10397179 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610298 | MDR-TB | lineage4.3.2.1 | None | SRR7516455 | Pre-XDR-TB | lineage2.2.1 | None | SRR671868 | MDR-TB | lineage4.5 | cn | SRR26937045 | MDR-TB | lineage2.2.1;lineage4 | None | SRR22757401 | MDR-TB | lineage2.2.1 | None | SRR16088062 | MDR-TB | lineage2.2.1 | None | SRR10809174 | Other | lineage2.2.1 | None | ERR13289296 | MDR-TB | lineage4.1.1.3 | None | SRR18715054 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13286099 | MDR-TB | lineage4.1.1.3 | None | ERR9992989 | XDR-TB | lineage4.1.1.3 | None | ERR2516214 | MDR-TB | lineage2.2.1 | be | ERR9992875 | XDR-TB | lineage4.3.2.1 | None | SRR1165512 | MDR-TB | lineage4.8 | None | ERR3014593 | Pre-XDR-TB | lineage4.3.1 | tn | SRR8791327 | Other | lineage4.9 | None | SRR11662142 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723870 | MDR-TB | lineage2.2.1 | cn | SRR29273741 | MDR-TB | lineage4.8 | None | SRR29056333 | MDR-TB | lineage4.3.4.2.1 | None | ERR13276230 | MDR-TB | lineage2.2.1 | None | SRR7755766 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420570 | MDR-TB | lineage2.2.1 | None | SRR15901697 | MDR-TB | lineage2.2.1 | None | SRR3085264 | MDR-TB | lineage2.2.1 | None | ERR550728 | MDR-TB | lineage2.2.1 | None | ERR10867783 | MDR-TB | lineage4.8 | None | ERR13290269 | MDR-TB | lineage4.8 | None | SRR29539423 | Pre-XDR-TB | lineage2.2.1 | None | SRR29538969 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866356 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246213 | MDR-TB | lineage2.2.1 | cn | SRR18549039 | MDR-TB | lineage2.2.1 | None | ERR5866421 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420736 | MDR-TB | lineage2.2.1 | None | ERR4276854 | MDR-TB | lineage4.2.1 | None | SRR7653017 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163052 | MDR-TB | lineage4.8 | None | ERR7911009 | MDR-TB | lineage4.3.3 | None | SRR21727571 | MDR-TB | lineage4.1.2.1 | None | ERR2510284 | Pre-XDR-TB | lineage3 | pk | SRR23310934 | MDR-TB | lineage2.2.1 | None | SRR24256141 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420546 | MDR-TB | lineage2.2.1 | None | ERR4830154 | MDR-TB | lineage2.2.1 | None | SRR29539290 | MDR-TB | lineage4.3.3 | None | ERR5865310 | Pre-XDR-TB | lineage2.2.1 | None | SRR17040823 | RR-TB | lineage2.2.1 | None | SRR671739 | MDR-TB | lineage2.2.1 | cn | SRR1166319 | MDR-TB | lineage4.2.1 | ro | SRR14801940 | MDR-TB | lineage2.2.1 | None | ERR4811339 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5865308 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810988 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811361 | MDR-TB | lineage2.2.1 | cn | ERR7911483 | MDR-TB | lineage2.2.1 | vn | ERR4811364 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044245 | MDR-TB | lineage2.2.1 | None | ERR8975725 | MDR-TB | lineage4.1.1.3 | None | SRR13180367 | MDR-TB | lineage2.2.1 | None | SRR5709765 | Pre-XDR-TB | lineage2.2.1 | th | SRR5341281 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR6824498 | MDR-TB | lineage2.2.1 | cn | SRR6824427 | MDR-TB | lineage2.2.1 | cn | SRR6824561 | MDR-TB | lineage2.2.1 | cn | SRR6824384 | MDR-TB | lineage2.2.1 | cn | ERR1034715 | MDR-TB | lineage4.1.2.1 | pe | SRR21732962 | Other | lineage3 | None | ERR550705 | MDR-TB | lineage2.2.1 | None | SRR5153608 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865311 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273135 | MDR-TB | lineage2.2.1 | None | SRR29093365 | Pre-XDR-TB | lineage4 | None | ERR5866354 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256225 | MDR-TB | lineage4.3.3 | None | ERR3273156 | MDR-TB | lineage2.2.1 | None | ERR4872324 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866423 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206963 | MDR-TB | lineage2.2.1 | None | SRR25827721 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917746 | MDR-TB | lineage2.2.1 | by | SRR24255960 | MDR-TB | lineage2.2.1 | None |
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