lineage | Count |
---|---|
lineage4.6.2.2 | 39 |
lineage4.1.2.1 | 3 |
lineage2.2.1 | 15 |
lineage4.2.1 | 7 |
lineage4.4.1.2 | 2 |
lineage4.5 | 1 |
lineage4.3.4.2 | 4 |
lineage4.8 | 4 |
lineage3 | 6 |
lineage2.2.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.3.4.1 | 5 |
lineage4.4.2 | 1 |
lineage4.6.2.2;lineage6 | 1 |
lineage4.1.1.3 | 1 |
lineage1.2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 93 |
ID | Drug resistance | Lineage | Country iso2 | SRR11444204 | Sensitive | lineage4.6.2.2 | None | SRR28393389 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29538984 | MDR-TB | lineage2.2.1 | None | SRR29539353 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817516 | Sensitive | lineage4.6.2.2 | gb | ERR13291805 | Sensitive | lineage4.6.2.2 | None | SRR10380076 | MDR-TB | lineage4.2.1 | None | SRR29231761 | MDR-TB | lineage4.4.1.2 | None | SRR11444061 | Sensitive | lineage4.6.2.2 | None | SRR11444252 | Sensitive | lineage4.6.2.2 | None | ERR10762411 | MDR-TB | lineage4.2.1 | None | SRR22251155 | MDR-TB | lineage4.5 | None | SRR21685342 | Sensitive | lineage4.6.2.2 | None | ERR13260044 | MDR-TB | lineage4.3.4.2 | None | SRR29772522 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799434 | MDR-TB | lineage4.8 | in | SRR11444077 | Sensitive | lineage4.6.2.2 | None | ERR11067745 | Sensitive | lineage4.6.2.2 | None | SRR6398121 | Sensitive | lineage3 | ca | SRR29230878 | Sensitive | lineage3 | None | SRR15600350 | MDR-TB | lineage2.2.1.1 | None | SRR29604874 | Sensitive | lineage4.6.2.2 | None | SRR16370347 | MDR-TB | lineage2.2.1 | None | SRR11444358 | Sensitive | lineage4.6.2.2 | None | SRR11444052 | Sensitive | lineage4.6.2.2 | None | ERR13261612 | MDR-TB | lineage4.4.1.1 | None | ERR12328165 | MDR-TB | lineage2.2.1 | None | ERR4423616 | Pre-XDR-TB | lineage4.3.2 | None | ERR4827985 | MDR-TB | lineage4.8 | None | ERR2707105 | MDR-TB | lineage4.3.4.1 | cd | ERR7911283 | MDR-TB | lineage2.2.1 | vn | ERR2706965 | MDR-TB | lineage4.3.4.1 | cd | SRR12420590 | MDR-TB | lineage4.4.2 | None | SRR11444158 | Sensitive | lineage4.6.2.2 | None | ERR4831814 | MDR-TB | lineage2.2.1 | vn | ERR702427 | HR-TB | lineage4.6.2.2;lineage6 | gh | SRR11444355 | Sensitive | lineage4.6.2.2 | None | ERR7911038 | MDR-TB | lineage4.2.1 | md | SRR11444022 | Sensitive | lineage4.6.2.2 | None | ERR11050853 | Sensitive | lineage4.6.2.2 | None | ERR10762344 | MDR-TB | lineage4.2.1 | None | ERR13285894 | MDR-TB | lineage4.2.1 | None | ERR13284192 | MDR-TB | lineage2.2.1 | None | ERR13285930 | MDR-TB | lineage4.2.1 | None | ERR10877894 | MDR-TB | lineage2.2.1 | None | SRR16100246 | Other | lineage4.6.2.2 | None | ERR3639817 | MDR-TB | lineage2.2.1 | None | ERR4831438 | Pre-XDR-TB | lineage3 | pk | SRR11444163 | Sensitive | lineage4.6.2.2 | None | ERR2707003 | MDR-TB | lineage4.4.1.2 | cd | ERR3287583 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR553359 | Sensitive | lineage4.6.2.2 | de | ERR11774973 | MDR-TB | lineage4.1.1.3 | None | SRR28393981 | MDR-TB | lineage4.1.2.1 | None | ERR2510365 | Pre-XDR-TB | lineage3 | pk | SRR11444289 | Sensitive | lineage4.6.2.2 | None | SRR11444413 | Sensitive | lineage4.6.2.2 | None | ERR4828090 | MDR-TB | lineage4.2.1 | None | ERR9030273 | MDR-TB | lineage4.8 | None | SRR11444178 | Sensitive | lineage4.6.2.2 | None | SRR11444259 | Sensitive | lineage4.6.2.2 | None | ERR7911155 | MDR-TB | lineage2.2.1 | vn | SRR11444405 | Sensitive | lineage4.6.2.2 | None | ERR13291452 | Sensitive | lineage4.6.2.2 | None | ERR10680216 | MDR-TB | lineage2.2.1 | None | ERR2707088 | MDR-TB | lineage4.3.4.1 | cd | SRR11444157 | Sensitive | lineage4.6.2.2 | None | SRR11444390 | Sensitive | lineage4.6.2.2 | None | SRR29231717 | MDR-TB | lineage4.3.4.1 | None | ERR6358856 | MDR-TB | lineage4.3.4.2 | None | SRR11444184 | Sensitive | lineage4.6.2.2 | None | SRR11444151 | Sensitive | lineage4.6.2.2 | None | SRR6397659 | Sensitive | lineage3 | ca | ERR3794451 | MDR-TB | lineage2.2.1 | None | SRR28044545 | RR-TB | lineage3 | None | ERR6358857 | MDR-TB | lineage4.3.4.2 | None | SRR29231851 | MDR-TB | lineage4.3.4.1 | None | ERR11068987 | Pre-XDR-TB | lineage4.8 | None | SRR11972374 | MDR-TB | lineage1.2.2.1 | None | SRR11444156 | Sensitive | lineage4.6.2.2 | None | SRR11444051 | Sensitive | lineage4.6.2.2 | None | SRR29539284 | MDR-TB | lineage2.2.1 | None | ERR8976079 | MDR-TB | lineage4.1.2.1 | None | SRR11461670 | Sensitive | lineage4.6.2.2 | None | SRR20969544 | Pre-XDR-TB | lineage2.2.1 | None | ERR751346 | Sensitive | lineage4.6.2.2 | gh | SRR11444366 | Sensitive | lineage4.6.2.2 | None | ERR13264846 | Sensitive | lineage4.6.2.2 | None | SRR11443990 | Sensitive | lineage4.6.2.2 | None | SRR11444087 | Sensitive | lineage4.6.2.2 | None | SRR11444060 | Sensitive | lineage4.6.2.2 | None | SRR11444078 | Sensitive | lineage4.6.2.2 | None | SRR11444411 | Sensitive | lineage4.6.2.2 | None |
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