Rv2043c - p.Ser164*
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
35 HR-TB
62 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 100 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1 | 6 |
| lineage4.3.3 | 1 |
| lineage1.1.1.1;lineage2.2.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage3.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5065358 | HR-TB | lineage2.2.1.1 | vn | SRR5065265 | HR-TB | lineage2.2.1.1 | vn | SRR5067484 | HR-TB | lineage2.2.1.1 | vn | SRR5073893 | HR-TB | lineage2.2.1.1 | vn | SRR26400019 | HR-TB | lineage2.2.1.1 | None | ERR9119409 | HR-TB | lineage2.2.1.1 | None | SRR16370358 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR070011 | MDR-TB | lineage2.2.1.1 | None | SRR26399180 | MDR-TB | lineage2.2.1.1 | None | SRR26399770 | MDR-TB | lineage2.2.1.1 | None | SRR067525 | MDR-TB | lineage2.2.1.1 | None | SRR16370269 | MDR-TB | lineage2.2.1.1 | None | SRR28389878 | MDR-TB | lineage4.1.1.3 | None | SRR26936995 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29050853 | HR-TB | lineage2.2.1.1 | None | SRR29051094 | MDR-TB | lineage2.2.1.1 | None | ERR7737822 | MDR-TB | lineage2.2.1.1 | None | SRR067532 | MDR-TB | lineage2.2.1.1 | None | SRR26399396 | HR-TB | lineage2.2.1.1 | None | SRR21887779 | MDR-TB | lineage2.2.1 | None | SRR069986 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13284053 | MDR-TB | lineage2.2.1.1 | None | SRR26936954 | MDR-TB | lineage2.2.1.1 | None | SRR29051163 | HR-TB | lineage2.2.1.1 | None | SRR069944 | MDR-TB | lineage2.2.1.1 | None | ERR4831745 | MDR-TB | lineage2.2.1.1 | None | ERR4831948 | MDR-TB | lineage2.2.1.1 | vn | ERR4831903 | MDR-TB | lineage2.2.1.1 | vn | ERR4831975 | MDR-TB | lineage2.2.1.1 | vn | ERR7911175 | MDR-TB | lineage2.2.1.1 | vn | ERR7911332 | MDR-TB | lineage2.2.1.1 | vn | ERR7911284 | MDR-TB | lineage2.2.1.1 | vn | ERR7911303 | Pre-XDR-TB | lineage2.2.1.1 | vn | ERR7911306 | MDR-TB | lineage2.2.1.1 | vn | ERR7911312 | MDR-TB | lineage2.2.1.1 | vn | SRR6367400 | HR-TB | lineage2.2.1.1 | au | ERR2653166 | MDR-TB | lineage4.3.3 | None | SRR26936930 | MDR-TB | lineage2.2.1.1 | None | ERR1035099 | Pre-XDR-TB | lineage2.2.1.1 | vn | SRR16370625 | MDR-TB | lineage2.2.1.1 | None | ERR11082745 | MDR-TB | lineage2.2.1 | None | SRR26937014 | MDR-TB | lineage2.2.1.1 | None | SRR5065462 | HR-TB | lineage2.2.1.1 | vn | SRR5065381 | MDR-TB | lineage2.2.1.1 | vn | SRR5067479 | HR-TB | lineage2.2.1.1 | vn | SRR5067391 | HR-TB | lineage2.2.1.1 | vn | SRR26937030 | MDR-TB | lineage2.2.1.1 | None | SRR5067611 | HR-TB | lineage2.2.1.1 | vn | SRR5067347 | HR-TB | lineage2.2.1.1 | vn | SRR5067608 | HR-TB | lineage2.2.1.1 | vn | SRR5073759 | HR-TB | lineage2.2.1.1 | vn | SRR5073613 | HR-TB | lineage2.2.1.1 | vn | SRR5074089 | HR-TB | lineage2.2.1.1 | vn | SRR069933 | MDR-TB | lineage2.2.1.1 | None | SRR26936958 | MDR-TB | lineage1.1.1.1;lineage2.2.1.1 | None | ERR11043261 | MDR-TB | lineage2.2.1.1 | None | SRR26399991 | MDR-TB | lineage2.2.1.1 | None | SRR067513 | MDR-TB | lineage2.2.1.1 | None | SRR26399975 | HR-TB | lineage2.2.1.1 | None | SRR069995 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR8217930 | HR-TB | lineage2.2.1.1 | None | ERR7737786 | MDR-TB | lineage2.2.1.1 | None | ERR10465765 | MDR-TB | lineage2.2.1.1 | None | SRR21887712 | MDR-TB | lineage2.2.1 | None | SRR1723994 | Pre-XDR-TB | lineage4.4.2 | cn | SRR28858618 | MDR-TB | lineage2.2.1.1 | None | ERR2179657 | Pre-XDR-TB | lineage4.4.2 | cn | SRR24709915 | MDR-TB | lineage2.2.1 | None | SRR26399626 | HR-TB | lineage2.2.1.1 | None | SRR29017496 | HR-TB | lineage2.2.1.1 | None | SRR22251235 | HR-TB | lineage2.2.1.1 | None | ERR7737866 | MDR-TB | lineage2.2.1.1 | None | ERR7737949 | MDR-TB | lineage2.2.1.1 | None | ERR13439914 | HR-TB | lineage2.2.1.1 | None | SRR26936942 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13284048 | MDR-TB | lineage2.2.1.1 | None | SRR16370555 | MDR-TB | lineage2.2.1.1 | None | SRR26936927 | MDR-TB | lineage2.2.1.1 | None | ERR990531 | Other | lineage3.1.1 | None | SRR16370541 | MDR-TB | lineage2.2.1.1 | None | ERR4276863 | MDR-TB | lineage2.2.1.1 | None | ERR13283993 | MDR-TB | lineage2.2.1.1 | None | ERR990532 | Other | lineage3.1.1 | None | ERR7737659 | MDR-TB | lineage2.2.1.1 | None | SRR21887682 | Pre-XDR-TB | lineage2.2.1 | None | SRR17856658 | Pre-XDR-TB | lineage2.2.1 | None | SRR28858671 | MDR-TB | lineage2.2.1.1 | None | SRR26399355 | MDR-TB | lineage2.2.1.1 | None | ERR13290840 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR7737732 | MDR-TB | lineage2.2.1.1 | None | SRR26399978 | HR-TB | lineage2.2.1.1 | None | SRR069938 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4831729 | HR-TB | lineage2.2.1.1 | vn | ERR4831805 | MDR-TB | lineage2.2.1.1 | vn | ERR7911154 | Pre-XDR-TB | lineage2.2.1.1 | vn | ERR4831992 | HR-TB | lineage2.2.1.1 | None | ERR7911162 | MDR-TB | lineage2.2.1.1 | vn | ERR7911184 | MDR-TB | lineage2.2.1.1 | vn | ERR4822322 | MDR-TB | lineage2.2.1.1 | de | ERR7911289 | MDR-TB | lineage2.2.1.1 | vn | ERR4830406 | HR-TB | lineage2.2.1.1 | vn | ERR7911497 | MDR-TB | lineage2.2.1.1 | vn | ERR4828683 | HR-TB | lineage2.2.1.1 | vn | ERR4828717 | HR-TB | lineage2.2.1.1 | vn | ERR4828221 | MDR-TB | lineage2.2.1.1 | None | ERR4828651 | HR-TB | lineage2.2.1.1 | None | ERR4831754 | HR-TB | lineage2.2.1.1 | vn | ERR4831775 | HR-TB | lineage2.2.1.1 | vn | ERR4831790 | HR-TB | lineage2.2.1.1 | vn | ERR4831793 | MDR-TB | lineage2.2.1.1 | vn | ERR4831887 | MDR-TB | lineage2.2.1.1 | vn | ERR4831907 | MDR-TB | lineage2.2.1.1 | vn | ERR7911489 | MDR-TB | lineage2.2.1.1 | vn |
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