Rv2043c - p.Ser67Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
3 RR-TB
15 HR-TB
98 MDR-TB
47 Pre-XDR-TB
3 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 111 |
| lineage2.2.2 | 7 |
| lineage4.8 | 4 |
| lineage2.2.1.1 | 3 |
| lineage2.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4 | 10 |
| lineage3 | 4 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1 | 4 |
| lineage4.9 | 4 |
| lineage3.1.2.1 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.2.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 167 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26937079 | MDR-TB | lineage2.2.1 | None | ERR4796836 | MDR-TB | lineage2.2.1 | in | ERR9992794 | Pre-XDR-TB | lineage2.2.2 | None | SRR5486873 | MDR-TB | lineage4.8 | None | ERR5865212 | MDR-TB | lineage2.2.1 | None | SRR1144766 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307624 | MDR-TB | lineage2.2.1 | None | SRR26937154 | MDR-TB | lineage2.2.1 | None | SRR25207280 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10185944 | MDR-TB | lineage2.1 | None | ERR4800294 | Pre-XDR-TB | lineage4.3.3 | in | SAMN02398714 | Pre-XDR-TB | lineage2.2.1 | kr | ERR3287731 | MDR-TB | lineage4.1.1 | pe | SRR28393492 | MDR-TB | lineage4.3.4.2 | None | ERR4832022 | MDR-TB | lineage2.2.1 | vn | ERR4831932 | HR-TB | lineage2.2.1 | vn | ERR4831986 | MDR-TB | lineage2.2.1 | vn | ERR4832046 | HR-TB | lineage2.2.1 | None | ERR4828737 | HR-TB | lineage2.2.1 | vn | ERR7911519 | MDR-TB | lineage2.2.1 | vn | ERR4831626 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4831906 | HR-TB | lineage2.2.1 | None | ERR4832041 | HR-TB | lineage2.2.1 | vn | ERR228006 | MDR-TB | lineage2.2.1 | ru | ERR228028 | MDR-TB | lineage2.2.1 | ru | ERR2516781 | Pre-XDR-TB | lineage2.2.2 | gb | ERR2516513 | MDR-TB | lineage2.2.1 | pe | SRR23938701 | MDR-TB | lineage2.2.1 | None | SRR29016931 | HR-TB | lineage2.2.1 | None | SRR11662445 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662698 | MDR-TB | lineage2.2.1 | None | SRR25515401 | MDR-TB | lineage2.2.2 | None | SRR25534370 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828734 | HR-TB | lineage2.2.1 | vn | SRR16088330 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553821 | MDR-TB | lineage4 | None | ERR13439899 | HR-TB | lineage2.2.1 | None | SRR29017144 | Pre-XDR-TB | lineage4 | None | ERR13260250 | MDR-TB | lineage2.2.1 | None | SRR6831874 | MDR-TB | lineage2.2.1 | None | ERR4423679 | RR-TB | lineage3 | None | ERR13191096 | MDR-TB | lineage2.2.1 | None | ERR10112904 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23340097 | MDR-TB | lineage2.2.1 | None | ERR10762454 | MDR-TB | lineage2.2.1 | None | ERR13258802 | MDR-TB | lineage2.2.1 | None | SRR1013638 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510389 | Pre-XDR-TB | lineage3 | pk | ERR4831509 | Pre-XDR-TB | lineage2.2.1 | pk | SRR14807600 | MDR-TB | lineage4.2.1 | None | SRR10040446 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680183 | MDR-TB | lineage4.9 | None | ERR11773712 | HR-TB | lineage4.8 | None | SRR11662497 | MDR-TB | lineage2.2.1 | None | ERR11044152 | MDR-TB | lineage2.2.1 | None | SRR10303282 | MDR-TB | lineage2.2.1 | None | SRR10430359 | MDR-TB | lineage2.2.1 | None | ERR4820223 | Other | lineage3.1.2.1 | gb | SRR5709761 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709757 | Pre-XDR-TB | lineage2.2.1 | th | ERR11081169 | MDR-TB | lineage2.2.1 | None | SRR6797801 | MDR-TB | lineage4 | None | SRR11972293 | MDR-TB | lineage2.2.1 | None | SRR5065261 | MDR-TB | lineage2.2.1 | vn | SRR27069381 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992798 | HR-TB | lineage2.2.2 | None | ERR4832000 | MDR-TB | lineage2.2.1 | vn | ERR1768622 | MDR-TB | lineage2.2.1 | None | SRR16088184 | MDR-TB | lineage4.3.3 | None | ERR13290881 | Pre-XDR-TB | lineage4.3.3 | None | SRR29385289 | MDR-TB | lineage2.2.1 | None | ERR13284952 | MDR-TB | lineage2.2.1 | None | SRR14801780 | MDR-TB | lineage2.2.1 | None | ERR5865211 | MDR-TB | lineage2.2.1 | None | ERR13267046 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13439900 | HR-TB | lineage2.2.1 | None | ERR9030453 | RR-TB | lineage3.1.1;lineage4 | None | ERR4423678 | MDR-TB | lineage3 | None | ERR13191097 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049033 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231545 | MDR-TB | lineage4.9 | None | ERR10112899 | MDR-TB | lineage4.1.1.3 | None | ERR133916 | MDR-TB | lineage2.2.1 | ru | ERR2653206 | MDR-TB | lineage4.3.4.2 | None | SRR7645950 | Pre-XDR-TB | lineage4.2.1 | None | ERR4798127 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796786 | MDR-TB | lineage2.2.1 | in | SRR29016762 | HR-TB | lineage2.2.1 | None | SAMN02360598 | Pre-XDR-TB | lineage2.2.1 | kr | SRR28044767 | XDR-TB | lineage3.1.2 | None | SRR1049032 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651622 | MDR-TB | lineage2.2.1 | cn | ERR13195616 | Pre-XDR-TB | lineage2.2.2 | None | SRR28351388 | XDR-TB | lineage4.2.1 | None | SRR28393695 | MDR-TB | lineage4.1.2.1 | None | SRR28394213 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR25395675 | MDR-TB | lineage2.2.1 | None | SRR1013639 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813863 | MDR-TB | lineage4.3.3 | br | ERR7911138 | MDR-TB | lineage2.2.1 | vn | ERR4831987 | MDR-TB | lineage2.2.1 | None | ERR4831998 | MDR-TB | lineage2.2.1 | None | ERR4832028 | MDR-TB | lineage2.2.1.1 | vn | ERR7911308 | Pre-XDR-TB | lineage2.2.1 | vn | ERR7911315 | MDR-TB | lineage2.2.1 | vn | ERR2706913 | MDR-TB | lineage4.9 | cd | ERR7911505 | MDR-TB | lineage2.2.1 | vn | ERR4829372 | Pre-XDR-TB | lineage2.2.1 | it | ERR4813362 | MDR-TB | lineage2.2.1 | pe | ERR11138654 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831272 | MDR-TB | lineage2.2.1 | de | ERR7911027 | MDR-TB | lineage2.2.1 | md | ERR2510461 | Pre-XDR-TB | lineage3 | pk | ERR038747 | MDR-TB | lineage4.8 | ug | SRR5266544 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2516263 | MDR-TB | lineage2.2.1 | be | ERR5865210 | MDR-TB | lineage2.2.1 | None | ERR11067574 | MDR-TB | lineage2.2.1 | None | ERR1768621 | MDR-TB | lineage2.2.1 | None | SRR12072604 | Pre-XDR-TB | lineage2.2.1 | None | SRR6384966 | MDR-TB | lineage2.2.1 | None | SRR5065326 | MDR-TB | lineage2.2.1 | vn | SRR15368852 | MDR-TB | lineage4.2.2 | None | SRR5065410 | HR-TB | lineage2.2.1 | vn | SRR21576633 | MDR-TB | lineage2.2.1 | None | SRR6832457 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517333 | MDR-TB | lineage2.2.1 | nl | ERR3273112 | Pre-XDR-TB | lineage2.2.2 | None | ERR551613 | MDR-TB | lineage2.2.1 | None | SRR10040316 | MDR-TB | lineage2.2.1 | None | ERR4276890 | MDR-TB | lineage2.2.1 | None | SRR4423179 | Pre-XDR-TB | lineage4 | None | ERR8975691 | HR-TB | lineage4.8 | None | ERR7737626 | MDR-TB | lineage2.2.1 | None | SRR7755711 | MDR-TB | lineage2.2.1 | None | ERR11773773 | MDR-TB | lineage2.2.1 | None | ERR5865623 | MDR-TB | lineage4.2.1.1 | None | ERR5865624 | MDR-TB | lineage4.2.1.1 | None | SRR22424898 | MDR-TB | lineage1.1.2 | None | SRR11662482 | Pre-XDR-TB | lineage2.2.1 | None | SRR5485559 | RR-TB | lineage4.9 | None | ERR4553716 | MDR-TB | lineage4 | None | ERR4553968 | Pre-XDR-TB | lineage4 | None | SRR29017583 | Pre-XDR-TB | lineage4 | None | ERR13259970 | MDR-TB | lineage2.2.1 | None | ERR2446586 | MDR-TB | lineage2.2.1 | nl | ERR13285716 | MDR-TB | lineage2.2.1 | None | ERR3275274 | MDR-TB | lineage2.2.1 | nl | ERR4828031 | MDR-TB | lineage2.2.1 | None | ERR11798557 | MDR-TB | lineage2.2.1 | None | ERR13276209 | MDR-TB | lineage2.2.1 | None | ERR13439881 | HR-TB | lineage2.2.1 | None | ERR13284332 | MDR-TB | lineage2.2.1 | None | SRR29274784 | MDR-TB | lineage2.2.1 | None | SRR14801708 | XDR-TB | lineage4.2.1 | None | ERR7737648 | MDR-TB | lineage2.2.1 | None | ERR8773989 | MDR-TB | lineage2.2.1 | None | SRR29017410 | Pre-XDR-TB | lineage4 | None | SRR29017445 | MDR-TB | lineage4 | None | ERR13284253 | MDR-TB | lineage2.2.1 | None | ERR13284314 | MDR-TB | lineage2.2.1 | None | SRR15316094 | Pre-XDR-TB | lineage2.2.1 | None | ERR3014585 | Pre-XDR-TB | lineage4.3.1 | tn | ERR11081734 | MDR-TB | lineage2.2.1 | None | ERR4553815 | MDR-TB | lineage4 | None | ERR2510361 | Pre-XDR-TB | lineage2.2.1 | pk | ERR2510321 | Pre-XDR-TB | lineage2.2.1 | pk |
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