Rv2043c - p.Thr114Met
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
24 Sensitive
3 RR-TB
23 HR-TB
43 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 93 |
| lineage2.2.1.1;lineage4.4.1.1.1 | 4 |
| lineage2.2.1.1;lineage4.3.2.1;lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage2.2.1.1;lineage4.3.2.1 | 2 |
| lineage2.2.1.1;lineage4.1.1.3 | 1 |
| lineage2.2.1.1;lineage4.1.1.3;lineage4.4.1.1.1 | 1 |
| lineage2.2.1.1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10748127 | MDR-TB | lineage2.2.1.1 | None | ERR13289040 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13289011 | MDR-TB | lineage2.2.1.1 | None | ERR13289289 | RR-TB | lineage2.2.1.1 | None | ERR9993212 | MDR-TB | lineage2.2.1.1 | None | ERR5918091 | HR-TB | lineage2.2.1.1 | za | SRR29093715 | Sensitive | lineage2.2.1.1;lineage4.4.1.1.1 | None | ERR10748406 | MDR-TB | lineage2.2.1.1 | None | ERR9119793 | MDR-TB | lineage2.2.1.1 | None | ERR5758473 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13285247 | HR-TB | lineage2.2.1.1 | None | ERR9120053 | MDR-TB | lineage2.2.1.1 | None | ERR5987292 | HR-TB | lineage2.2.1.1 | None | ERR9806990 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29096830 | Sensitive | lineage2.2.1.1 | None | ERR4011114 | Sensitive | lineage2.2.1.1 | None | SRR29093534 | MDR-TB | lineage2.2.1.1 | None | SRR28351596 | MDR-TB | lineage2.2.1.1 | None | SRR29094021 | Sensitive | lineage2.2.1.1 | None | ERR10748136 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10869118 | HR-TB | lineage2.2.1.1 | None | ERR6362366 | MDR-TB | lineage2.2.1.1 | None | ERR2200011 | HR-TB | lineage2.2.1.1 | None | ERR11774997 | Sensitive | lineage2.2.1.1 | None | ERR10112362 | HR-TB | lineage2.2.1.1;lineage4.3.2.1;lineage4.3.3;lineage4.4.1.1 | None | ERR8699609 | Sensitive | lineage2.2.1.1;lineage4.3.2.1 | None | ERR3340738 | Sensitive | lineage2.2.1.1 | za | ERR3340744 | Sensitive | lineage2.2.1.1 | za | ERR11049617 | HR-TB | lineage2.2.1.1 | None | SRR16156763 | MDR-TB | lineage2.2.1.1 | None | ERR9030405 | HR-TB | lineage2.2.1.1 | None | ERR11774996 | HR-TB | lineage2.2.1.1 | None | ERR10748153 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6207285 | MDR-TB | lineage2.2.1.1 | None | ERR9120054 | MDR-TB | lineage2.2.1.1 | None | ERR1750916 | Sensitive | lineage2.2.1.1 | None | ERR5987253 | MDR-TB | lineage2.2.1.1 | None | ERR4011055 | Sensitive | lineage2.2.1.1 | None | ERR1035073 | Pre-XDR-TB | lineage2.2.1.1 | za | SRR29096491 | HR-TB | lineage2.2.1.1 | None | ERR7737816 | MDR-TB | lineage2.2.1.1 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29096316 | Sensitive | lineage2.2.1.1 | None | SRR29093864 | Sensitive | lineage2.2.1.1 | None | ERR10748407 | MDR-TB | lineage2.2.1.1 | None | SRR16156807 | MDR-TB | lineage2.2.1.1 | None | SRR29093340 | Sensitive | lineage2.2.1.1;lineage4.4.1.1.1 | None | SRR16156738 | MDR-TB | lineage2.2.1.1;lineage4.1.1.3 | None | SRR29096373 | MDR-TB | lineage2.2.1.1 | None | SRR29093144 | HR-TB | lineage2.2.1.1 | None | SRR29094036 | HR-TB | lineage2.2.1.1 | None | SRR29093350 | Sensitive | lineage2.2.1.1;lineage4.1.1.3;lineage4.4.1.1.1 | None | SRR29096576 | Sensitive | lineage2.2.1.1 | None | SRR10869101 | MDR-TB | lineage2.2.1.1 | None | SRR29094048 | Sensitive | lineage2.2.1.1;lineage4.4.1.1.1 | None | ERR5918149 | HR-TB | lineage2.2.1.1 | za | ERR7911563 | Pre-XDR-TB | lineage2.2.1.1 | za | ERR8699096 | Sensitive | lineage2.2.1.1 | None | ERR8975884 | MDR-TB | lineage2.2.1.1 | None | ERR8976110 | MDR-TB | lineage2.2.1.1 | None | ERR552807 | HR-TB | lineage2.2.1.1 | None | ERR9120144 | MDR-TB | lineage2.2.1.1 | None | ERR11775651 | Sensitive | lineage2.2.1.1 | None | ERR8975636 | HR-TB | lineage2.2.1.1 | None | ERR1034985 | Sensitive | lineage2.2.1.1 | za | ERR10748325 | HR-TB | lineage2.2.1.1;lineage4.1.2 | None | ERR10748412 | MDR-TB | lineage2.2.1.1 | None | ERR8975960 | Sensitive | lineage2.2.1.1 | None | ERR6362010 | MDR-TB | lineage2.2.1.1 | None | ERR9120120 | HR-TB | lineage2.2.1.1 | None | SRR29093860 | Sensitive | lineage2.2.1.1 | None | ERR10748094 | MDR-TB | lineage2.2.1.1 | None | ERR12141649 | HR-TB | lineage2.2.1.1 | None | ERR13288850 | MDR-TB | lineage2.2.1.1 | None | ERR1750915 | Sensitive | lineage2.2.1.1 | za | ERR13288964 | RR-TB | lineage2.2.1.1 | None | ERR9119709 | MDR-TB | lineage2.2.1.1 | None | ERR9992780 | XDR-TB | lineage2.2.1.1 | None | ERR13288971 | RR-TB | lineage2.2.1.1 | None | SRR10869065 | MDR-TB | lineage2.2.1.1 | None | ERR6362338 | MDR-TB | lineage2.2.1.1 | None | ERR6362063 | MDR-TB | lineage2.2.1.1 | None | ERR9119767 | MDR-TB | lineage2.2.1.1 | None | SRR2101470 | MDR-TB | lineage2.2.1.1 | None | ERR13285248 | HR-TB | lineage2.2.1.1 | None | ERR9120145 | MDR-TB | lineage2.2.1.1 | None | SRR29056034 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29093574 | Sensitive | lineage2.2.1.1;lineage4.4.1.1.1 | None | ERR5918125 | HR-TB | lineage2.2.1.1 | za | ERR5917998 | MDR-TB | lineage2.2.1.1 | za | ERR8699783 | MDR-TB | lineage2.2.1.1 | None | ERR5987182 | MDR-TB | lineage2.2.1.1 | None | ERR8975002 | HR-TB | lineage2.2.1.1;lineage4.3.2.1 | None | ERR9120121 | HR-TB | lineage2.2.1.1 | None | ERR8975850 | MDR-TB | lineage2.2.1.1 | None | ERR8975885 | MDR-TB | lineage2.2.1.1 | None | ERR4011113 | Sensitive | lineage2.2.1.1 | None | ERR8976091 | MDR-TB | lineage2.2.1.1 | None | ERR552806 | HR-TB | lineage2.2.1.1 | sz | ERR10748331 | MDR-TB | lineage2.2.1.1 | None | SRR29093187 | MDR-TB | lineage2.2.1.1 | None | ERR6362659 | MDR-TB | lineage2.2.1.1 | None | ERR10748552 | MDR-TB | lineage2.2.1.1 | None |
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