lineage | Count |
---|---|
lineage2.2.1 | 34 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage4.3.4.2 | 3 |
lineage2.2.1.2 | 2 |
lineage3 | 1 |
lineage1.2.2.2 | 1 |
lineage2.1 | 3 |
lineage3.1.1 | 2 |
lineage4.6.3;lineage3.1.1 | 1 |
lineage2.2.1.1 | 2 |
lineage4.3.3;lineage2.2.1 | 1 |
lineage4.2.2.2 | 3 |
1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | SRR16156228 | MDR-TB | lineage2.2.1 | None | SRR14782658 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR14801881 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088528 | XDR-TB | lineage2.2.1 | None | SRR16115035 | MDR-TB | lineage4.3.4.2 | None | SRR16156281 | MDR-TB | lineage2.2.1 | None | SRR16156247 | MDR-TB | lineage2.2.1 | None | SRR18912066 | MDR-TB | lineage4.3.4.2 | None | SRR18715392 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715389 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516865 | MDR-TB | lineage2.2.1 | gb | SRR21686600 | MDR-TB | lineage4.3.4.2 | None | SRR21031690 | MDR-TB | lineage2.2.1 | None | SRR1723886 | MDR-TB | lineage2.2.1 | cn | SRR5153716 | Pre-XDR-TB | lineage2.2.1 | None | SRR21031683 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887740 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510534 | Pre-XDR-TB | lineage2.2.1.2 | pk | ERR2510260 | Pre-XDR-TB | lineage3 | pk | ERR2510293 | Pre-XDR-TB | lineage2.2.1.2 | pk | SRR5152925 | MDR-TB | lineage2.2.1 | None | SRR7585423 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR5709748 | Pre-XDR-TB | lineage2.1 | th | ERR2517371 | MDR-TB | lineage3.1.1 | nl | ERR4872279 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824681 | MDR-TB | lineage2.2.1 | cn | SRR8380043 | Pre-XDR-TB | lineage2.2.1 | None | ERR027450 | MDR-TB | lineage2.2.1 | ru | SRR7755695 | MDR-TB | lineage2.2.1 | None | ERR10762272 | MDR-TB | lineage2.2.1 | None | ERR3639789 | MDR-TB | lineage2.2.1 | None | ERR4011933 | MDR-TB | lineage4.6.3;lineage3.1.1 | None | ERR3794376 | MDR-TB | lineage2.2.1 | None | ERR403284 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796541 | MDR-TB | lineage2.2.1.1 | in | ERR403282 | Pre-XDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR4797441 | MDR-TB | lineage4.2.2.2 | in | ERR4800588 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798235 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR7737741 | MDR-TB | lineage3.1.1 | None | ERR5865843 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737726 | HR-TB | None | ERR7910903 | MDR-TB | lineage2.2.1 | md | ERR8773553 | MDR-TB | lineage4.2.2.2 | None | ERR8665707 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665706 | Pre-XDR-TB | lineage2.2.1 | None | SRR12072587 | Pre-XDR-TB | lineage2.2.1 | None | SRR10306014 | MDR-TB | lineage2.2.1 | None | SRR11033727 | Pre-XDR-TB | lineage2.2.1 | None | SRR11715716 | Pre-XDR-TB | lineage2.1 | None | SRR11828985 | Pre-XDR-TB | lineage2.1 | th | ERR8773555 | MDR-TB | lineage4.2.2.2 | None | SRR12072590 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232431 | MDR-TB | lineage2.2.1 | None | SRR12072603 | Pre-XDR-TB | lineage2.2.1 | None |
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