lineage | Count |
---|---|
lineage4 | 9 |
lineage4.1.1.1 | 8 |
lineage4.2.1 | 8 |
lineage2.2.1.1 | 2 |
lineage2.2.1 | 19 |
2 | |
lineage3 | 2 |
lineage4.8 | 6 |
lineage4.3.3 | 3 |
lineage1.2.1.2 | 2 |
lineage4.5 | 1 |
lineage4.9 | 3 |
lineage4.3.4.2 | 1 |
lineage6.2.3 | 1 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 68 |
ID | Drug resistance | Lineage | Country iso2 | SAMEA5569642 | Pre-XDR-TB | lineage4 | None | SRR29017626 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR14801511 | Pre-XDR-TB | lineage4.2.1 | None | ERR4553984 | MDR-TB | lineage4.1.1.1 | None | SRR14801460 | MDR-TB | lineage4.2.1 | None | SRR26159037 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5865220 | MDR-TB | lineage2.2.1 | None | ERR3287449 | Pre-XDR-TB | lineage4 | None | ERR4553971 | MDR-TB | None | ERR4831488 | Pre-XDR-TB | lineage3 | None | ERR10762366 | Pre-XDR-TB | lineage4.2.1 | None | ERR2516722 | RR-TB | lineage4.8 | nl | ERR11082610 | MDR-TB | lineage2.2.1 | None | SRR1168962 | MDR-TB | lineage4.3.3 | None | ERR751620 | Pre-XDR-TB | lineage4 | pe | ERR9029867 | Pre-XDR-TB | lineage4 | None | ERR4813203 | Pre-XDR-TB | lineage4 | None | ERR13285922 | MDR-TB | lineage4.2.1 | None | SRR29017465 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR2516653 | RR-TB | lineage4.8 | nl | ERR2653208 | MDR-TB | lineage4.1.1.1 | None | ERR4553913 | MDR-TB | lineage4.1.1.1 | None | ERR3287595 | MDR-TB | lineage4 | None | SRR29017008 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR2516632 | MDR-TB | lineage4.8 | pe | SRR17406764 | Pre-XDR-TB | lineage2.2.1 | None | SRR19295645 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR067671 | Pre-XDR-TB | lineage2.2.1 | ru | SRR6832007 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824569 | MDR-TB | lineage2.2.1 | cn | ERR11081122 | MDR-TB | lineage2.2.1 | None | ERR9125470 | MDR-TB | lineage1.2.1.2 | None | ERR5865221 | MDR-TB | lineage2.2.1 | None | SRR28393617 | MDR-TB | lineage4.8 | None | SRR6824520 | MDR-TB | lineage2.2.1 | cn | ERR3273089 | MDR-TB | lineage4.5 | None | ERR751601 | MDR-TB | lineage4 | pe | SRR1723453 | MDR-TB | lineage2.2.1 | cn | SRR12420574 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510670 | MDR-TB | lineage4.9 | it | SRR28394175 | MDR-TB | lineage4.8 | None | SRR6832335 | MDR-TB | lineage4.3.3 | None | SRR28046227 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340079 | MDR-TB | lineage2.2.1 | None | SRR16088187 | MDR-TB | lineage2.2.1 | None | SRR3086368 | MDR-TB | lineage4.9 | None | ERR2516640 | MDR-TB | lineage4.3.4.2 | nl | SRR20969758 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762389 | MDR-TB | lineage4.2.1 | None | ERR3287864 | MDR-TB | lineage4 | pe | ERR4813107 | Pre-XDR-TB | lineage4 | None | ERR4553955 | MDR-TB | lineage4.1.1.1 | None | ERR10680115 | RR-TB | lineage6.2.3 | None | ERR4796481 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796383 | Pre-XDR-TB | lineage2.2.1 | in | ERR13285920 | Pre-XDR-TB | lineage4.2.1 | None | SRR16058679 | MDR-TB | lineage1.2.1.2 | None | ERR10762435 | Pre-XDR-TB | lineage4.2.1 | None | ERR1034659 | MDR-TB | lineage4.4.1.1 | bg | ERR2516367 | MDR-TB | lineage2.2.1 | be | ERR5865222 | MDR-TB | lineage2.2.1 | None | ERR2510631 | Pre-XDR-TB | lineage3 | pk | ERR2510863 | MDR-TB | lineage4.9 | None | SAMN02584606 | MDR-TB | lineage4.3.3 | md | ERR2516439 | RR-TB | lineage4.8 | nl | SRR14801451 | MDR-TB | lineage4.2.1 | None | ERR4553978 | MDR-TB | None | ERR4553996 | MDR-TB | lineage4.1.1.1 | None |
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