lineage | Count |
---|---|
lineage4.6.2.2 | 4 |
lineage2.2.1 | 44 |
lineage4.3.3 | 7 |
lineage4.4.2 | 3 |
lineage1.1.2 | 1 |
lineage2.2.1.1 | 2 |
lineage4.2.2.2 | 1 |
lineage3 | 6 |
lineage4.3.4.1 | 4 |
lineage4.2.1 | 2 |
lineage1.2.2.2 | 2 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 77 |
ID | Drug resistance | Lineage | Country iso2 | ERR8774480 | MDR-TB | lineage4.6.2.2 | None | SRR11567820 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260163 | MDR-TB | lineage4.3.3 | None | SRR10306005 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368738 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824675 | Pre-XDR-TB | lineage2.2.1 | cn | SRR20970065 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255959 | MDR-TB | lineage2.2.1 | None | SRR1723993 | MDR-TB | lineage4.4.2 | cn | SRR6824331 | MDR-TB | lineage4.4.2 | cn | SAMN03246485 | MDR-TB | lineage2.2.1 | cn | ERR5865855 | Pre-XDR-TB | lineage2.2.1 | None | SRR11567798 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824631 | MDR-TB | lineage2.2.1 | cn | SRR10500312 | Pre-XDR-TB | lineage1.1.2 | None | ERR4423759 | MDR-TB | lineage4.6.2.2 | None | ERR2179653 | MDR-TB | lineage4.4.2 | cn | SRR21277572 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1723744 | RR-TB | lineage2.2.1 | cn | ERR4830837 | MDR-TB | lineage4.2.2.2 | et | SRR16088079 | MDR-TB | lineage4.3.3 | None | SRR5217432 | RR-TB | lineage2.2.1 | None | SRR7069250 | MDR-TB | lineage3 | None | ERR2516679 | MDR-TB | lineage4.3.4.1 | nl | SRR20632789 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082277 | MDR-TB | lineage4.3.4.1 | None | SRR20632825 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040515 | MDR-TB | lineage2.2.1 | None | ERR2517067 | MDR-TB | lineage3 | gb | ERR2512821 | MDR-TB | lineage3 | gb | ERR4811739 | MDR-TB | lineage4.3.3 | pe | SRR13423540 | MDR-TB | lineage2.2.1 | None | SRR27069461 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782605 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723758 | RR-TB | lineage2.2.1 | None | SRR1723759 | MDR-TB | lineage2.2.1 | None | SRR20632815 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632771 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153878 | MDR-TB | lineage4.2.1 | None | SRR6824680 | RR-TB | lineage2.2.1 | cn | SRR11567821 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865856 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324372 | MDR-TB | lineage4.3.4.1 | None | SRR25340907 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR3743497 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774482 | MDR-TB | lineage4.6.2.2 | None | SRR24255982 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796570 | MDR-TB | lineage3 | in | SAMEA2534623 | MDR-TB | lineage2.2.1 | uz | SRR21277273 | Pre-XDR-TB | lineage2.2.1 | None | SRR25340814 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR552398 | MDR-TB | lineage2.2.1 | None | ERR11082278 | MDR-TB | lineage4.3.4.1 | None | SRR21276945 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277249 | Pre-XDR-TB | lineage2.2.1 | None | ERR552399 | MDR-TB | lineage2.2.1 | None | SRR8651583 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13291104 | MDR-TB | lineage2.1 | None | ERR4813355 | MDR-TB | lineage4.3.3 | None | SRR10306003 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632781 | Pre-XDR-TB | lineage2.2.1 | None | SRR14781935 | MDR-TB | lineage4.2.1 | None | SRR10040303 | Pre-XDR-TB | lineage2.2.1 | None | ERR114445 | MDR-TB | lineage3 | None | ERR2517087 | MDR-TB | lineage2.2.1 | gb | SRR1723760 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13261899 | MDR-TB | lineage4.3.3 | None | ERR552399_ERR552398 | MDR-TB | lineage2.2.1 | None | ERR13260578 | MDR-TB | lineage4.3.3 | None | SRR15316550 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13267434 | MDR-TB | lineage4.3.3 | None | ERR4423760 | MDR-TB | lineage4.6.2.2 | None | SRR8651596 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29539669 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368924 | Pre-XDR-TB | lineage2.2.1 | None | SRR10306015 | RR-TB | lineage2.2.1 | None | SRR2100294 | MDR-TB | lineage3 | None |
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