Rv2043c - p.Val155Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
8 HR-TB
78 MDR-TB
50 Pre-XDR-TB
1 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 100 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 10 |
| lineage1.1.3 | 2 |
| lineage3 | 3 |
| lineage2.2.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.3 | 5 |
| lineage2.2.2 | 3 |
| lineage4.5 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage3;lineage4.1.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage5.1.2 | 2 |
| lineage2.2.1;lineage4.1.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2307413 | MDR-TB | lineage2.2.1 | None | SRR21747032 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774279 | MDR-TB | lineage4.6.2.2 | None | ERR5865582 | MDR-TB | lineage2.2.1 | None | ERR13285868 | MDR-TB | lineage2.2.1 | None | ERR4828136 | Pre-XDR-TB | lineage2.2.1 | None | ERR552978 | MDR-TB | lineage2.2.1 | None | SRR10303280 | Pre-XDR-TB | lineage2.2.1 | None | SRR20139571 | HR-TB | lineage4.1.2.1 | None | SRR29539213 | MDR-TB | lineage2.2.1 | None | ERR3794368 | MDR-TB | lineage2.2.1 | None | SRR29017457 | MDR-TB | lineage1.1.3 | None | SRR24710274 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762325 | MDR-TB | lineage2.2.1 | None | SRR10380087 | MDR-TB | lineage2.2.1 | None | SRR070004 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341438 | Other | lineage3 | None | SRR29273968 | MDR-TB | lineage4.1.2.1 | None | SRR20139570 | HR-TB | lineage4.1.2.1 | None | SRR25207015 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4830057 | MDR-TB | lineage2.2.1 | None | ERR4830123 | MDR-TB | lineage2.2.1 | None | ERR4830114 | Pre-XDR-TB | lineage2.2.1 | tj | ERR4830134 | MDR-TB | lineage2.2.1 | None | ERR1034877 | MDR-TB | lineage2.2.1 | pt | SRR2024894 | MDR-TB | lineage2.2.1 | cn | SRR2024969 | MDR-TB | lineage2.2.1 | cn | SRR22424788 | MDR-TB | lineage1.1.2 | None | SRR28351655 | Pre-XDR-TB | lineage2.2.1 | None | SRR22048551 | MDR-TB | lineage4.2.1 | None | ERR2516352 | Pre-XDR-TB | lineage2.2.1 | be | SRR14802036 | MDR-TB | lineage2.2.1 | None | SRR5153599 | Pre-XDR-TB | lineage2.2.1 | None | SRR28858421 | MDR-TB | lineage2.2.1 | None | ERR5865583 | MDR-TB | lineage2.2.1 | None | ERR4025017 | MDR-TB | lineage4.3.3 | None | ERR4827461 | MDR-TB | lineage2.2.1 | None | SRR18054794 | MDR-TB | lineage2.2.1 | None | ERR4798355 | MDR-TB | lineage2.2.1 | in | ERR4798760 | Pre-XDR-TB | lineage2.2.1 | in | ERR2307706 | MDR-TB | lineage2.2.1 | None | SRR28498568 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088349 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291025 | MDR-TB | lineage2.2.2 | None | SRR29126877 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807724 | MDR-TB | lineage2.2.1 | None | ERR2307432 | MDR-TB | lineage2.2.1 | None | SRR3085270 | MDR-TB | lineage2.2.1 | None | ERR4828007 | MDR-TB | lineage2.2.1 | None | SRR24709964 | MDR-TB | lineage2.2.1 | None | SRR6807723 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430357 | Pre-XDR-TB | lineage2.2.1 | None | SRR20139554 | HR-TB | lineage4.1.2.1 | None | SRR14802202 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307711 | MDR-TB | lineage2.2.1 | None | SRR29538895 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830099 | Pre-XDR-TB | lineage2.2.1 | None | ERR13106393 | MDR-TB | lineage4.5 | None | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | ERR13191059 | MDR-TB | lineage2.2.2 | None | ERR13191069 | MDR-TB | lineage2.2.2 | None | SRR20139556 | HR-TB | lineage4.1.2.1 | None | SRR21747046 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813859 | MDR-TB | lineage4.3.4.1 | br | ERR6865398 | MDR-TB | lineage4.3.3 | None | SRR2024934 | MDR-TB | lineage2.2.1 | cn | SAMEA2535044 | MDR-TB | lineage2.2.1 | uz | ERR133984 | MDR-TB | lineage2.2.1 | ru | ERR2516496 | MDR-TB | lineage4.3.3 | pe | ERR2307532 | MDR-TB | lineage2.2.1 | None | SRR29440897 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR29274742 | MDR-TB | lineage2.2.1 | None | ERR2307793 | MDR-TB | lineage2.2.1 | None | ERR4553473 | MDR-TB | lineage1.1.3 | None | SRR21576721 | MDR-TB | lineage2.2.1 | None | SRR14782555 | Other | lineage2.2.1 | None | SRR11662607 | MDR-TB | lineage2.2.1 | None | SRR18002892 | Pre-XDR-TB | lineage2.2.1 | None | SRR070021 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827992 | MDR-TB | lineage2.2.1 | None | SRR28394246 | MDR-TB | lineage4.3.3 | None | SRR23310864 | HR-TB | lineage2.2.1 | None | SRR10380105 | MDR-TB | lineage2.2.1 | None | SRR21276936 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255893 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266750 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261962 | Pre-XDR-TB | lineage3;lineage4.1.1.3 | None | ERR4827937 | MDR-TB | lineage2.2.1 | None | ERR13289478 | MDR-TB | lineage2.2.1 | None | SRR12142323 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR552978_ERR552977 | MDR-TB | lineage2.2.1 | None | SRR6356929 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710191 | XDR-TB | lineage2.2.1 | None | SRR6831794 | MDR-TB | lineage2.2.1 | None | SRR29274726 | MDR-TB | lineage2.2.1 | None | ERR13284284 | MDR-TB | lineage2.2.1 | None | SRR30180449 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284057 | MDR-TB | lineage4.1.2.1 | None | ERR1023224 | MDR-TB | lineage5.1.2 | None | ERR13261963 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1.3 | None | SRR14802042 | MDR-TB | lineage2.2.1 | None | SRR20139559 | HR-TB | lineage4.1.2.1 | None | ERR2307691 | MDR-TB | lineage2.2.1 | None | SRR24114349 | MDR-TB | lineage3 | None | ERR4796768 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR7592360 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4799148 | Pre-XDR-TB | lineage2.2.1 | in | ERR13262158 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307485 | MDR-TB | lineage2.2.1 | None | ERR4830043 | MDR-TB | lineage2.2.1 | None | SRR671822 | Pre-XDR-TB | lineage2.2.1 | cn | SRR10380104 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813942 | MDR-TB | lineage4.3.4.1 | br | ERR11798598 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394188 | MDR-TB | lineage4.3.3 | None | ERR4829368 | MDR-TB | lineage2.2.1 | it | SRR2024889 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024954 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911025 | MDR-TB | lineage2.2.1 | md | ERR2510680 | MDR-TB | lineage2.2.1 | it | ERR551494 | MDR-TB | lineage2.2.1 | tm | SRR5341320 | Other | lineage3 | in | ERR552977 | MDR-TB | lineage2.2.1 | None | SRR5341253 | MDR-TB | lineage4.2.2 | in | ERR12115317 | MDR-TB | lineage5.1.2 | None | SRR29440895 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4827436 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829622 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653177 | MDR-TB | lineage4.3.2 | None | SRR8791296 | Other | lineage4.9 | None | SRR14801989 | HR-TB | lineage2.2.1 | None | SRR067545 | Pre-XDR-TB | lineage2.2.1 | None | SRR7829584 | MDR-TB | lineage2.2.1 | None | ERR13289449 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782553 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829878 | Pre-XDR-TB | lineage2.2.1 | it | ERR11138611 | MDR-TB | lineage2.2.1 | None | ERR11043544 | MDR-TB | lineage4.1.2.1 | None | SRR18003001 | Pre-XDR-TB | lineage2.2.1 | None | SRR20139555 | HR-TB | lineage4.1.2.1 | None | SRR25534415 | Pre-XDR-TB | lineage2.2.1 | None |
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